RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 ANKS6Q68DC2 871 aa17.34■□□□□ 0.37
LSM5-204ENST00000409909 VASH2Q86V25 355 aa17.34■□□□□ 0.37
LSM5-204ENST00000409909 LILRA3Q8N6C8 439 aaPredicted RBP17.34■□□□□ 0.37
LSM5-204ENST00000409909 GLIS1Q8NBF1 620 aa17.34■□□□□ 0.37
LSM5-204ENST00000409909 OR52K1Q8NGK4 314 aa17.34■□□□□ 0.37
LSM5-204ENST00000409909 JPH3Q8WXH2 748 aaPredicted RBP17.34■□□□□ 0.37
LSM5-204ENST00000409909 RSC1A1Q92681 617 aa17.34■□□□□ 0.37
LSM5-204ENST00000409909 ULK4Q96C45 1275 aa17.34■□□□□ 0.37
LSM5-204ENST00000409909 CDKN2AIPNLQ96HQ2 116 aa17.34■□□□□ 0.37
LSM5-204ENST00000409909 LINC00615Q96LM1 132 aaPredicted RBP17.34■□□□□ 0.37
LSM5-204ENST00000409909 C9orf72Q96LT7 481 aa17.34■□□□□ 0.37
LSM5-204ENST00000409909 TGM7Q96PF1 710 aa17.34■□□□□ 0.37
LSM5-204ENST00000409909 INSM2Q96T92 566 aaPredicted RBP17.34■□□□□ 0.37
LSM5-204ENST00000409909 TLR10Q9BXR5 811 aa17.34■□□□□ 0.37
LSM5-204ENST00000409909 CFAP20Q9Y6A4 193 aaKnown RBP17.34■□□□□ 0.37
LSM5-204ENST00000409909 BOD1L1Q8NFC6 3051 aa17.33■□□□□ 0.37
LSM5-204ENST00000409909 IGLV3-16A0A075B6K0 115 aa17.33■□□□□ 0.36
LSM5-204ENST00000409909 CAPN5O15484 640 aaPredicted RBP17.33■□□□□ 0.36
LSM5-204ENST00000409909 KIF1CO43896 1103 aaKnown RBP17.33■□□□□ 0.36
LSM5-204ENST00000409909 ATP1B2P14415 290 aaPredicted RBP17.33■□□□□ 0.36
LSM5-204ENST00000409909 PSMA3P25788 255 aa17.33■□□□□ 0.36
LSM5-204ENST00000409909 GRIA1P42261 906 aa17.33■□□□□ 0.36
LSM5-204ENST00000409909 CAPZBP47756 277 aa17.33■□□□□ 0.36
LSM5-204ENST00000409909 GPR33Q49SQ1 333 aa17.33■□□□□ 0.36
LSM5-204ENST00000409909 CCDC38Q502W7 563 aa17.33■□□□□ 0.36
LSM5-204ENST00000409909 KIAA1614Q5VZ46 1190 aa17.33■□□□□ 0.36
LSM5-204ENST00000409909 LINC00523Q86TU6 105 aa17.33■□□□□ 0.36
LSM5-204ENST00000409909 PIANPQ8IYJ0 282 aa17.33■□□□□ 0.36
LSM5-204ENST00000409909 SPDYE1Q8NFV5 336 aaPredicted RBP17.33■□□□□ 0.36
LSM5-204ENST00000409909 STYXQ8WUJ0 223 aa17.33■□□□□ 0.36
LSM5-204ENST00000409909 DCUN1D1Q96GG9 259 aa17.33■□□□□ 0.36
LSM5-204ENST00000409909 ALS2CR12Q96Q35 445 aa17.33■□□□□ 0.36
LSM5-204ENST00000409909 COPS8Q99627 209 aa17.33■□□□□ 0.36
LSM5-204ENST00000409909 CTRCQ99895 268 aa17.33■□□□□ 0.36
LSM5-204ENST00000409909 ASPSCR1Q9BZE9 553 aa17.33■□□□□ 0.36
LSM5-204ENST00000409909 WWP1Q9H0M0 922 aa17.33■□□□□ 0.36
LSM5-204ENST00000409909 APMAPQ9HDC9 416 aa17.33■□□□□ 0.36
LSM5-204ENST00000409909 FBXO8Q9NRD0 319 aa17.33■□□□□ 0.36
LSM5-204ENST00000409909 FAM8A1Q9UBU6 413 aa17.33■□□□□ 0.36
LSM5-204ENST00000409909 CCDC78A2IDD5 438 aa17.32■□□□□ 0.36
LSM5-204ENST00000409909 ERI2A8K979 691 aaKnown RBP17.32■□□□□ 0.36
LSM5-204ENST00000409909 STMND1H3BQB6 276 aa17.32■□□□□ 0.36
LSM5-204ENST00000409909 SUN1O94901 812 aa17.32■□□□□ 0.36
LSM5-204ENST00000409909 PRB1P04280 392 aa17.32■□□□□ 0.36
LSM5-204ENST00000409909 ANKRD34CP0C6C1 535 aa17.32■□□□□ 0.36
LSM5-204ENST00000409909 ZSCAN5DPP0CG00 497 aa17.32■□□□□ 0.36
LSM5-204ENST00000409909 MTHFD1P11586 935 aaKnown RBP17.32■□□□□ 0.36
LSM5-204ENST00000409909 WT1P19544 449 aaPredicted RBP17.32■□□□□ 0.36
LSM5-204ENST00000409909 ACRV1P26436 265 aa17.32■□□□□ 0.36
LSM5-204ENST00000409909 PRLHRP49683 370 aa17.32■□□□□ 0.36
LSM5-204ENST00000409909 RAB15P59190 212 aa17.32■□□□□ 0.36
LSM5-204ENST00000409909 CCNG2Q16589 344 aa17.32■□□□□ 0.36
LSM5-204ENST00000409909 ZRANB3Q5FWF4 1079 aa17.32■□□□□ 0.36
LSM5-204ENST00000409909 DCAF12Q5T6F0 453 aa17.32■□□□□ 0.36
LSM5-204ENST00000409909 SERPINA9Q86WD7 417 aa17.32■□□□□ 0.36
LSM5-204ENST00000409909 CFAP206Q8IYR0 622 aa17.32■□□□□ 0.36
LSM5-204ENST00000409909 SLC39A7Q92504 469 aa17.32■□□□□ 0.36
LSM5-204ENST00000409909 TTC9Q92623 222 aa17.32■□□□□ 0.36
LSM5-204ENST00000409909 NKD1Q969G9 470 aa17.32■□□□□ 0.36
LSM5-204ENST00000409909 SPRY4Q9C004 299 aa17.32■□□□□ 0.36
LSM5-204ENST00000409909 SIDT1Q9NXL6 827 aaKnown RBP17.32■□□□□ 0.36
LSM5-204ENST00000409909 ZDHHC3Q9NYG2 299 aa17.32■□□□□ 0.36
LSM5-204ENST00000409909 ACSL5Q9ULC5 683 aa17.32■□□□□ 0.36
LSM5-204ENST00000409909 PPP2R2CQ9Y2T4 447 aa17.32■□□□□ 0.36
LSM5-204ENST00000409909 PCDHB11Q9Y5F2 797 aa17.32■□□□□ 0.36
LSM5-204ENST00000409909 KLHL33A6NCF5 533 aa17.31■□□□□ 0.36
LSM5-204ENST00000409909 ERVH48-1M5A8F1 160 aa17.31■□□□□ 0.36
LSM5-204ENST00000409909 POLBP06746 335 aa17.31■□□□□ 0.36
LSM5-204ENST00000409909 RALBP11234 206 aa17.31■□□□□ 0.36
LSM5-204ENST00000409909 FDFT1P37268 417 aa17.31■□□□□ 0.36
LSM5-204ENST00000409909 PPP1CAP62136 330 aa17.31■□□□□ 0.36
LSM5-204ENST00000409909 RHDQ02161 417 aa17.31■□□□□ 0.36
LSM5-204ENST00000409909 CDH17Q12864 832 aa17.31■□□□□ 0.36
LSM5-204ENST00000409909 SEMA5AQ13591 1074 aa17.31■□□□□ 0.36
LSM5-204ENST00000409909 ZNF658BQ4V348 819 aaPredicted RBP17.31■□□□□ 0.36
LSM5-204ENST00000409909 MANEAQ5SRI9 462 aa17.31■□□□□ 0.36
LSM5-204ENST00000409909 DUS1LQ6P1R4 473 aaKnown RBP17.31■□□□□ 0.36
LSM5-204ENST00000409909 TAS2R42Q7RTR8 314 aa17.31■□□□□ 0.36
LSM5-204ENST00000409909 LSM14AQ8ND56 463 aaKnown RBP17.31■□□□□ 0.36
LSM5-204ENST00000409909 HEXDCQ8WVB3 486 aa17.31■□□□□ 0.36
LSM5-204ENST00000409909 RAB6BQ9NRW1 208 aa17.31■□□□□ 0.36
LSM5-204ENST00000409909 IMP3Q9NV31 184 aaKnown RBP17.31■□□□□ 0.36
LSM5-204ENST00000409909 EPHA6Q9UF33 1036 aa17.31■□□□□ 0.36
LSM5-204ENST00000409909 OR51F1A6NGY5 319 aa17.3■□□□□ 0.36
LSM5-204ENST00000409909 CFAP99D6REC4 459 aa17.3■□□□□ 0.36
LSM5-204ENST00000409909 TK2O00142 265 aa17.3■□□□□ 0.36
LSM5-204ENST00000409909 TOX3O15405 576 aaPredicted RBP17.3■□□□□ 0.36
LSM5-204ENST00000409909 FGGP02679 453 aa17.3■□□□□ 0.36
LSM5-204ENST00000409909 RPL22P35268 128 aaKnown RBP17.3■□□□□ 0.36
LSM5-204ENST00000409909 SEPHS1P49903 392 aa17.3■□□□□ 0.36
LSM5-204ENST00000409909 CACNG1Q06432 222 aa17.3■□□□□ 0.36
LSM5-204ENST00000409909 DBN1Q16643 649 aa17.3■□□□□ 0.36
LSM5-204ENST00000409909 CAPRIN2Q6IMN6 1127 aaKnown RBP17.3■□□□□ 0.36
LSM5-204ENST00000409909 DRICH1Q6PGQ1 229 aaPredicted RBP17.3■□□□□ 0.36
LSM5-204ENST00000409909 FAM92BQ6ZTR7 304 aa17.3■□□□□ 0.36
LSM5-204ENST00000409909 CLDN19Q8N6F1 224 aa17.3■□□□□ 0.36
LSM5-204ENST00000409909 DNAAF3Q8N9W5 541 aa17.3■□□□□ 0.36
LSM5-204ENST00000409909 TRIM58Q8NG06 486 aa17.3■□□□□ 0.36
LSM5-204ENST00000409909 OR13J1Q8NGT2 312 aa17.3■□□□□ 0.36
LSM5-204ENST00000409909 RMDN2Q96LZ7 410 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms