RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 SPINT3P49223 89 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 POLR2LP62875 67 aaKnown RBP19.81■□□□□ 0.76
USP39-204ENST00000409766 GRIK2Q13002 908 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 RPS6KA2Q15349 733 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 VPS26BQ4G0F5 336 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 GRASPQ7Z6J2 395 aaPredicted RBP19.81■□□□□ 0.76
USP39-204ENST00000409766 AHI1Q8N157 1196 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 PQLC1Q8N2U9 271 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 HERVK_113Q902F9 699 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 OTUB2Q96DC9 234 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 AIG1Q9NVV5 245 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 C6orf203Q9P0P8 240 aaPredicted RBP19.81■□□□□ 0.76
USP39-204ENST00000409766 NDUFAF1Q9Y375 327 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 CHD9Q3L8U1 2897 aa19.81■□□□□ 0.76
USP39-204ENST00000409766 LIN7AO14910 233 aaPredicted RBP19.8■□□□□ 0.76
USP39-204ENST00000409766 GUCA1CO95843 209 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 EN2P19622 333 aaPredicted RBP19.8■□□□□ 0.76
USP39-204ENST00000409766 PEX2P28328 305 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 LRRC36Q1X8D7 754 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 TTLL9Q3SXZ7 439 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 IRGCQ6NXR0 463 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 BLOC1S3Q6QNY0 202 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 NAT16Q8N8M0 369 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 FRS2Q8WU20 508 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 MRGPRX3Q96LB0 322 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 GPATCH1Q9BRR8 931 aaKnown RBP19.8■□□□□ 0.76
USP39-204ENST00000409766 KLHL4Q9C0H6 718 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 VCX3BQ9H321 246 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 KLHL42Q9P2K6 505 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 RWDD3Q9Y3V2 267 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 CAPN1P07384 714 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 VCLP18206 1134 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 POLR2EP19388 210 aaKnown RBP19.8■□□□□ 0.76
USP39-204ENST00000409766 HSPA7P48741 367 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 ATXN3P54252 364 aaPredicted RBP19.8■□□□□ 0.76
USP39-204ENST00000409766 CBX2Q14781 532 aaPredicted RBP19.8■□□□□ 0.76
USP39-204ENST00000409766 TRIP10Q15642 601 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 ZNF697Q5TEC3 545 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 BRAT1Q6PJG6 821 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 Q6ZSR9 355 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 PDSS2Q86YH6 399 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 OR4F6Q8NGB9 312 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 METTL6Q8TCB7 284 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 SLC39A3Q9BRY0 314 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 APOL5Q9BWW9 433 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 SLC2A11Q9BYW1 496 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 BRINP2Q9C0B6 783 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 ABCG8Q9H221 673 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 IPPKQ9H8X2 491 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 RIC8BQ9NVN3 520 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 ZDHHC7Q9NXF8 308 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 KCTD5Q9NXV2 234 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 TMPRSS11EQ9UL52 423 aa19.8■□□□□ 0.76
USP39-204ENST00000409766 C5orf67F2Z3F1 127 aa19.79■□□□□ 0.76
USP39-204ENST00000409766 OTCP00480 354 aa19.79■□□□□ 0.76
USP39-204ENST00000409766 CBSLP0DN79 551 aa19.79■□□□□ 0.76
USP39-204ENST00000409766 CEBPBP17676 345 aa19.79■□□□□ 0.76
USP39-204ENST00000409766 CBSP35520 551 aa19.79■□□□□ 0.76
USP39-204ENST00000409766 RECQLP46063 649 aaPredicted RBP19.79■□□□□ 0.76
USP39-204ENST00000409766 ERVK-8P63133 956 aa19.79■□□□□ 0.76
USP39-204ENST00000409766 KLC1Q07866 573 aa19.79■□□□□ 0.76
USP39-204ENST00000409766 RALGDSQ12967 914 aa19.79■□□□□ 0.76
USP39-204ENST00000409766 TRAF3Q13114 568 aa19.79■□□□□ 0.76
USP39-204ENST00000409766 SAMD4BQ5PRF9 694 aaKnown RBP19.79■□□□□ 0.76
USP39-204ENST00000409766 C6orf136Q5SQH8 315 aa19.79■□□□□ 0.76
USP39-204ENST00000409766 TSPEARQ8WU66 669 aa19.79■□□□□ 0.76
USP39-204ENST00000409766 SORCS1Q8WY21 1168 aa19.79■□□□□ 0.76
USP39-204ENST00000409766 ING5Q8WYH8 240 aa19.79■□□□□ 0.76
USP39-204ENST00000409766 ULK4Q96C45 1275 aa19.79■□□□□ 0.76
USP39-204ENST00000409766 RHBDF1Q96CC6 855 aa19.79■□□□□ 0.76
USP39-204ENST00000409766 PCDHAC1Q9H158 963 aa19.79■□□□□ 0.76
USP39-204ENST00000409766 RDH14Q9HBH5 336 aa19.79■□□□□ 0.76
USP39-204ENST00000409766 ZMYM5Q9UJ78 669 aa19.79■□□□□ 0.76
USP39-204ENST00000409766 C9JVG2 144 aa19.78■□□□□ 0.76
USP39-204ENST00000409766 ANGPT2O15123 496 aa19.78■□□□□ 0.76
USP39-204ENST00000409766 PEX1O43933 1283 aa19.78■□□□□ 0.76
USP39-204ENST00000409766 ZFP36L2P47974 494 aaKnown RBP19.78■□□□□ 0.76
USP39-204ENST00000409766 TRAP1Q12931 704 aaKnown RBP19.78■□□□□ 0.76
USP39-204ENST00000409766 COQ5Q5HYK3 327 aa19.78■□□□□ 0.76
USP39-204ENST00000409766 SULT1C3Q6IMI6 304 aa19.78■□□□□ 0.76
USP39-204ENST00000409766 CYB5D2Q8WUJ1 264 aa19.78■□□□□ 0.76
USP39-204ENST00000409766 LRCH3Q96II8 777 aa19.78■□□□□ 0.76
USP39-204ENST00000409766 TEX37Q96LM6 180 aa19.78■□□□□ 0.76
USP39-204ENST00000409766 HOPXQ9BPY8 73 aaPredicted RBP19.78■□□□□ 0.76
USP39-204ENST00000409766 HEPHQ9BQS7 1158 aa19.78■□□□□ 0.76
USP39-204ENST00000409766 TMEM79Q9BSE2 394 aa19.78■□□□□ 0.76
USP39-204ENST00000409766 CD244Q9BZW8 370 aa19.78■□□□□ 0.76
USP39-204ENST00000409766 EPS15L1Q9UBC2 864 aa19.78■□□□□ 0.76
USP39-204ENST00000409766 TTC34A8MYJ7 566 aa19.78■□□□□ 0.76
USP39-204ENST00000409766 ARHGEF15O94989 841 aa19.78■□□□□ 0.76
USP39-204ENST00000409766 CCR7P32248 378 aa19.78■□□□□ 0.76
USP39-204ENST00000409766 ARL1P40616 181 aaPredicted RBP19.78■□□□□ 0.76
USP39-204ENST00000409766 SLC7A2P52569 658 aa19.78■□□□□ 0.76
USP39-204ENST00000409766 RCAN2Q14206 197 aa19.78■□□□□ 0.76
USP39-204ENST00000409766 SFT2D3Q587I9 215 aa19.78■□□□□ 0.76
USP39-204ENST00000409766 OGFRL1Q5TC84 451 aaPredicted RBP19.78■□□□□ 0.76
USP39-204ENST00000409766 CHCHD4Q8N4Q1 142 aa19.78■□□□□ 0.76
USP39-204ENST00000409766 UBTD2Q8WUN7 234 aa19.78■□□□□ 0.76
USP39-204ENST00000409766 ZNF707Q96C28 371 aaPredicted RBP19.78■□□□□ 0.76
USP39-204ENST00000409766 SLC45A3Q96JT2 553 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms