RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 CSRP3P50461 194 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 EIF3EP60228 445 aaKnown RBP14.44□□□□□ -0.1
CBX3-203ENST00000409747 SH3BP2P78314 561 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 NFE2L1Q14494 772 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.44□□□□□ -0.1
CBX3-203ENST00000409747 ANKRD20A2Q5SQ80 823 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 ANKRD20A1Q5TYW2 823 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 ANKRD20A3Q5VUR7 823 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 METRNLQ641Q3 311 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 RANBP10Q6VN20 620 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 PPP1R3BQ86XI6 285 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 GPR150Q8NGU9 434 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 ZFPM2Q8WW38 1151 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 ULK4Q96C45 1275 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 MRFAP1L1Q96HT8 127 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 CD180Q99467 661 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 ASB8Q9H765 288 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 PDE7BQ9NP56 450 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 IMP3Q9NV31 184 aaKnown RBP14.44□□□□□ -0.1
CBX3-203ENST00000409747 FEZ2Q9UHY8 353 aaPredicted RBP14.44□□□□□ -0.1
CBX3-203ENST00000409747 ACSL5Q9ULC5 683 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 PSMD13Q9UNM6 376 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 PCDHB3Q9Y5E6 796 aa14.44□□□□□ -0.1
CBX3-203ENST00000409747 SPTA1P02549 2419 aa14.43□□□□□ -0.1
CBX3-203ENST00000409747 GOLGA6L3A6NEY3 463 aa14.43□□□□□ -0.1
CBX3-203ENST00000409747 MGAT4DA6NG13 374 aa14.43□□□□□ -0.1
CBX3-203ENST00000409747 SOWAHDA6NJG2 315 aa14.43□□□□□ -0.1
CBX3-203ENST00000409747 NKX2-8O15522 239 aa14.43□□□□□ -0.1
CBX3-203ENST00000409747 KCNN4O15554 427 aa14.43□□□□□ -0.1
CBX3-203ENST00000409747 KIF1CO43896 1103 aaKnown RBP14.43□□□□□ -0.1
CBX3-203ENST00000409747 TCN2P20062 427 aa14.43□□□□□ -0.1
CBX3-203ENST00000409747 PSMB4P28070 264 aa14.43□□□□□ -0.1
CBX3-203ENST00000409747 PBLDP30039 288 aaPredicted RBP14.43□□□□□ -0.1
CBX3-203ENST00000409747 ADRA1AP35348 466 aa14.43□□□□□ -0.1
CBX3-203ENST00000409747 BCL7AQ4VC05 210 aa14.43□□□□□ -0.1
CBX3-203ENST00000409747 DARS2Q6PI48 645 aaKnown RBP14.43□□□□□ -0.1
CBX3-203ENST00000409747 FAM83HQ6ZRV2 1179 aaPredicted RBP14.43□□□□□ -0.1
CBX3-203ENST00000409747 BPHLQ86WA6 291 aaPredicted RBP14.43□□□□□ -0.1
CBX3-203ENST00000409747 KMT5CQ86Y97 462 aa14.43□□□□□ -0.1
CBX3-203ENST00000409747 OR4K2Q8NGD2 314 aa14.43□□□□□ -0.1
CBX3-203ENST00000409747 OR2L2Q8NH16 312 aa14.43□□□□□ -0.1
CBX3-203ENST00000409747 HEXDCQ8WVB3 486 aa14.43□□□□□ -0.1
CBX3-203ENST00000409747 APOBEC4Q8WW27 367 aaKnown RBP14.43□□□□□ -0.1
CBX3-203ENST00000409747 DCUN1D1Q96GG9 259 aa14.43□□□□□ -0.1
CBX3-203ENST00000409747 SPATA13Q96N96 652 aa14.43□□□□□ -0.1
CBX3-203ENST00000409747 GORASP1Q9BQQ3 440 aa14.43□□□□□ -0.1
CBX3-203ENST00000409747 SEMA5BQ9P283 1151 aa14.43□□□□□ -0.1
CBX3-203ENST00000409747 IL17BQ9UHF5 180 aa14.43□□□□□ -0.1
CBX3-203ENST00000409747 LNPEPQ9UIQ6 1025 aa14.43□□□□□ -0.1
CBX3-203ENST00000409747 KCND3Q9UK17 655 aa14.43□□□□□ -0.1
CBX3-203ENST00000409747 CFAP99D6REC4 459 aa14.42□□□□□ -0.1
CBX3-203ENST00000409747 TERTO14746 1132 aaKnown RBP14.42□□□□□ -0.1
CBX3-203ENST00000409747 KIAA0754O94854 1291 aa14.42□□□□□ -0.1
CBX3-203ENST00000409747 PTMAP06454 111 aaKnown RBP14.42□□□□□ -0.1
CBX3-203ENST00000409747 SLC35G4P0C7Q5 338 aa14.42□□□□□ -0.1
CBX3-203ENST00000409747 CCNYL3P0C7X3 344 aa14.42□□□□□ -0.1
CBX3-203ENST00000409747 DLSTP36957 453 aa14.42□□□□□ -0.1
CBX3-203ENST00000409747 HADHAP40939 763 aa14.42□□□□□ -0.1
CBX3-203ENST00000409747 ARL4DP49703 201 aa14.42□□□□□ -0.1
CBX3-203ENST00000409747 ACY1Q03154 408 aa14.42□□□□□ -0.1
CBX3-203ENST00000409747 SEPT6Q14141 434 aa14.42□□□□□ -0.1
CBX3-203ENST00000409747 DET1Q7L5Y6 550 aa14.42□□□□□ -0.1
CBX3-203ENST00000409747 OOSP2Q86WS3 158 aa14.42□□□□□ -0.1
CBX3-203ENST00000409747 SIDT2Q8NBJ9 832 aaKnown RBP14.42□□□□□ -0.1
CBX3-203ENST00000409747 GALNT6Q8NCL4 622 aa14.42□□□□□ -0.1
CBX3-203ENST00000409747 SLC41A2Q96JW4 573 aa14.42□□□□□ -0.1
CBX3-203ENST00000409747 LINC00615Q96LM1 132 aaPredicted RBP14.42□□□□□ -0.1
CBX3-203ENST00000409747 FCRL4Q96PJ5 515 aa14.42□□□□□ -0.1
CBX3-203ENST00000409747 C10orf88Q9H8K7 445 aa14.42□□□□□ -0.1
CBX3-203ENST00000409747 FKBPLQ9UIM3 349 aa14.42□□□□□ -0.1
CBX3-203ENST00000409747 CRLS1Q9UJA2 301 aa14.42□□□□□ -0.1
CBX3-203ENST00000409747 KCTD3Q9Y597 815 aa14.42□□□□□ -0.1
CBX3-203ENST00000409747 FLNBO75369 2602 aaKnown RBP14.41□□□□□ -0.1
CBX3-203ENST00000409747 GOLGA6L9A6NEM1 432 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 TLCD2A6NGC4 264 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 ZNF28P17035 718 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 ITGALP20701 1170 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 ZNF75DP51815 510 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 NFKB2Q00653 900 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 TUBB3Q13509 450 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 DNTTIP2Q5QJE6 756 aaKnown RBP14.41□□□□□ -0.1
CBX3-203ENST00000409747 CARFQ8N187 725 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 TXLNBQ8N3L3 684 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 C9orf43Q8TAL5 461 aaPredicted RBP14.41□□□□□ -0.1
CBX3-203ENST00000409747 C12orf66Q96MD2 445 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 TBL1YQ9BQ87 522 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 APOL2Q9BQE5 337 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 WWP1Q9H0M0 922 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 CROTQ9UKG9 612 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 RARRES3Q9UL19 164 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 HEBP2Q9Y5Z4 205 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 COLEC10Q9Y6Z7 277 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 MYO18BQ8IUG5 2567 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 UBA6A0AVT1 1052 aaPredicted RBP14.41□□□□□ -0.1
CBX3-203ENST00000409747 OR5K3A6NET4 321 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 SPAG6O75602 509 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 NDUFS1P28331 727 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 OAS2P29728 719 aaKnown RBP14.41□□□□□ -0.1
CBX3-203ENST00000409747 CA5AP35218 305 aa14.41□□□□□ -0.1
CBX3-203ENST00000409747 PTPRCAPQ14761 206 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms