RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 MARCH4Q9P2E8 410 aaPredicted RBP30.54■■■□□ 2.48
TRAF3IP1-203ENST00000409739 SATB2Q9UPW6 733 aa30.54■■■□□ 2.48
TRAF3IP1-203ENST00000409739 LILRA5A6NI73 299 aa30.53■■■□□ 2.48
TRAF3IP1-203ENST00000409739 MPOP05164 745 aa30.53■■■□□ 2.48
TRAF3IP1-203ENST00000409739 EPHA4P54764 986 aa30.53■■■□□ 2.48
TRAF3IP1-203ENST00000409739 GABREP78334 506 aa30.53■■■□□ 2.48
TRAF3IP1-203ENST00000409739 SQSTM1Q13501 440 aa30.53■■■□□ 2.48
TRAF3IP1-203ENST00000409739 ZNF658BQ4V348 819 aaPredicted RBP30.53■■■□□ 2.48
TRAF3IP1-203ENST00000409739 C3orf38Q5JPI3 329 aa30.53■■■□□ 2.48
TRAF3IP1-203ENST00000409739 SYDE1Q6ZW31 735 aaPredicted RBP30.53■■■□□ 2.48
TRAF3IP1-203ENST00000409739 JAMLQ86YT9 394 aa30.53■■■□□ 2.48
TRAF3IP1-203ENST00000409739 OR10G6Q8NH81 332 aa30.53■■■□□ 2.48
TRAF3IP1-203ENST00000409739 CXorf40BQ96DE9 158 aa30.53■■■□□ 2.48
TRAF3IP1-203ENST00000409739 CCM2Q9BSQ5 444 aa30.53■■■□□ 2.48
TRAF3IP1-203ENST00000409739 TBC1D10AQ9BXI6 508 aa30.53■■■□□ 2.48
TRAF3IP1-203ENST00000409739 VPS37BQ9H9H4 285 aa30.53■■■□□ 2.48
TRAF3IP1-203ENST00000409739 UCK1Q9HA47 277 aa30.53■■■□□ 2.48
TRAF3IP1-203ENST00000409739 EPB41L5Q9HCM4 733 aa30.53■■■□□ 2.48
TRAF3IP1-203ENST00000409739 ACSL5Q9ULC5 683 aa30.53■■■□□ 2.48
TRAF3IP1-203ENST00000409739 AK5Q9Y6K8 562 aa30.53■■■□□ 2.48
TRAF3IP1-203ENST00000409739 PRAMEF33A0A0G2JMD5 474 aa30.52■■■□□ 2.48
TRAF3IP1-203ENST00000409739 C17orf113A0A1B0GUU1 675 aa30.52■■■□□ 2.48
TRAF3IP1-203ENST00000409739 DUX1O43812 170 aa30.52■■■□□ 2.48
TRAF3IP1-203ENST00000409739 OR1I1O60431 355 aa30.52■■■□□ 2.48
TRAF3IP1-203ENST00000409739 IVDP26440 423 aa30.52■■■□□ 2.48
TRAF3IP1-203ENST00000409739 CFHR1Q03591 330 aa30.52■■■□□ 2.48
TRAF3IP1-203ENST00000409739 RPE65Q16518 533 aa30.52■■■□□ 2.48
TRAF3IP1-203ENST00000409739 CASC4Q6P4E1 433 aa30.52■■■□□ 2.48
TRAF3IP1-203ENST00000409739 TMEM26Q6ZUK4 368 aa30.52■■■□□ 2.48
TRAF3IP1-203ENST00000409739 CFAP206Q8IYR0 622 aa30.52■■■□□ 2.48
TRAF3IP1-203ENST00000409739 GPR150Q8NGU9 434 aa30.52■■■□□ 2.48
TRAF3IP1-203ENST00000409739 TTC1Q99614 292 aa30.52■■■□□ 2.48
TRAF3IP1-203ENST00000409739 TRIM56Q9BRZ2 755 aaKnown RBP30.52■■■□□ 2.48
TRAF3IP1-203ENST00000409739 WWP1Q9H0M0 922 aa30.52■■■□□ 2.48
TRAF3IP1-203ENST00000409739 SEMA6CQ9H3T2 930 aa30.52■■■□□ 2.48
TRAF3IP1-203ENST00000409739 COG4Q9H9E3 785 aa30.52■■■□□ 2.48
TRAF3IP1-203ENST00000409739 SLC40A1Q9NP59 571 aa30.52■■■□□ 2.48
TRAF3IP1-203ENST00000409739 SAMD15Q9P1V8 674 aa30.52■■■□□ 2.48
TRAF3IP1-203ENST00000409739 CCDC187A0A096LP49 1063 aa30.51■■■□□ 2.47
TRAF3IP1-203ENST00000409739 SDR42E2A6NKP2 422 aa30.51■■■□□ 2.47
TRAF3IP1-203ENST00000409739 TMX2-CTNND1H3BSU7 103 aa30.51■■■□□ 2.47
TRAF3IP1-203ENST00000409739 CD3EAPO15446 510 aaKnown RBP30.51■■■□□ 2.47
TRAF3IP1-203ENST00000409739 BRINP1O60477 761 aa30.51■■■□□ 2.47
TRAF3IP1-203ENST00000409739 ST3GAL2Q16842 350 aa30.51■■■□□ 2.47
TRAF3IP1-203ENST00000409739 AARS2Q5JTZ9 985 aaKnown RBP30.51■■■□□ 2.47
TRAF3IP1-203ENST00000409739 ZNF574Q6ZN55 896 aaPredicted RBP30.51■■■□□ 2.47
TRAF3IP1-203ENST00000409739 LDB1Q86U70 411 aaPredicted RBP30.51■■■□□ 2.47
TRAF3IP1-203ENST00000409739 AGGF1Q8N302 714 aaeCLIP30.51■■■□□ 2.47
TRAF3IP1-203ENST00000409739 AHCYL2Q96HN2 611 aaKnown RBP30.51■■■□□ 2.47
TRAF3IP1-203ENST00000409739 TRIM51Q9BSJ1 452 aa30.51■■■□□ 2.47
TRAF3IP1-203ENST00000409739 STRADBQ9C0K7 418 aa30.51■■■□□ 2.47
TRAF3IP1-203ENST00000409739 POLR1BQ9H9Y6 1135 aa30.51■■■□□ 2.47
TRAF3IP1-203ENST00000409739 ANAPC5Q9UJX4 755 aa30.51■■■□□ 2.47
TRAF3IP1-203ENST00000409739 ANKRD11Q6UB99 2663 aaPredicted RBP30.5■■■□□ 2.47
TRAF3IP1-203ENST00000409739 PMS2P1A4D2B8 440 aa30.5■■■□□ 2.47
TRAF3IP1-203ENST00000409739 QSOX1O00391 747 aa30.5■■■□□ 2.47
TRAF3IP1-203ENST00000409739 TTI1O43156 1089 aa30.5■■■□□ 2.47
TRAF3IP1-203ENST00000409739 VAPBO95292 243 aa30.5■■■□□ 2.47
TRAF3IP1-203ENST00000409739 HOXB3P14651 431 aaPredicted RBP30.5■■■□□ 2.47
TRAF3IP1-203ENST00000409739 LSSP48449 732 aa30.5■■■□□ 2.47
TRAF3IP1-203ENST00000409739 IZUMO3Q5VZ72 239 aa30.5■■■□□ 2.47
TRAF3IP1-203ENST00000409739 KIAA0930Q6ICG6 404 aaPredicted RBP30.5■■■□□ 2.47
TRAF3IP1-203ENST00000409739 PROSER1Q86XN7 944 aa30.5■■■□□ 2.47
TRAF3IP1-203ENST00000409739 SPDYE1Q8NFV5 336 aaPredicted RBP30.5■■■□□ 2.47
TRAF3IP1-203ENST00000409739 WDR36Q8NI36 951 aaKnown RBP30.5■■■□□ 2.47
TRAF3IP1-203ENST00000409739 RMDN2Q96LZ7 410 aa30.5■■■□□ 2.47
TRAF3IP1-203ENST00000409739 C16orf45Q96MC5 204 aaPredicted RBP30.5■■■□□ 2.47
TRAF3IP1-203ENST00000409739 ZMIZ1Q9ULJ6 1067 aa30.5■■■□□ 2.47
TRAF3IP1-203ENST00000409739 CFAP20Q9Y6A4 193 aaKnown RBP30.5■■■□□ 2.47
TRAF3IP1-203ENST00000409739 FAM237BA0A1B0GVD1 139 aa30.49■■■□□ 2.47
TRAF3IP1-203ENST00000409739 POLBP06746 335 aa30.49■■■□□ 2.47
TRAF3IP1-203ENST00000409739 GSTM1P09488 218 aa30.49■■■□□ 2.47
TRAF3IP1-203ENST00000409739 SLC35G4P0C7Q5 338 aa30.49■■■□□ 2.47
TRAF3IP1-203ENST00000409739 MTHFD1P11586 935 aaKnown RBP30.49■■■□□ 2.47
TRAF3IP1-203ENST00000409739 PPARGP37231 505 aaPredicted RBP30.49■■■□□ 2.47
TRAF3IP1-203ENST00000409739 MAPK9P45984 424 aa30.49■■■□□ 2.47
TRAF3IP1-203ENST00000409739 PPM1FP49593 454 aaPredicted RBP30.49■■■□□ 2.47
TRAF3IP1-203ENST00000409739 GSTM4Q03013 218 aa30.49■■■□□ 2.47
TRAF3IP1-203ENST00000409739 DHX34Q14147 1143 aaKnown RBP30.49■■■□□ 2.47
TRAF3IP1-203ENST00000409739 GPR18Q14330 331 aa30.49■■■□□ 2.47
TRAF3IP1-203ENST00000409739 PHF19Q5T6S3 580 aa30.49■■■□□ 2.47
TRAF3IP1-203ENST00000409739 PCGF5Q86SE9 256 aa30.49■■■□□ 2.47
TRAF3IP1-203ENST00000409739 HOOK3Q86VS8 718 aa30.49■■■□□ 2.47
TRAF3IP1-203ENST00000409739 RBM12BQ8IXT5 1001 aaKnown RBP30.49■■■□□ 2.47
TRAF3IP1-203ENST00000409739 OR4D9Q8NGE8 314 aa30.49■■■□□ 2.47
TRAF3IP1-203ENST00000409739 C12orf66Q96MD2 445 aa30.49■■■□□ 2.47
TRAF3IP1-203ENST00000409739 INSM2Q96T92 566 aaPredicted RBP30.49■■■□□ 2.47
TRAF3IP1-203ENST00000409739 KRT12Q99456 494 aa30.49■■■□□ 2.47
TRAF3IP1-203ENST00000409739 DPYSL5Q9BPU6 564 aa30.49■■■□□ 2.47
TRAF3IP1-203ENST00000409739 ZMYND15Q9H091 742 aa30.49■■■□□ 2.47
TRAF3IP1-203ENST00000409739 IMP3Q9NV31 184 aaKnown RBP30.49■■■□□ 2.47
TRAF3IP1-203ENST00000409739 TMEM9Q9P0T7 183 aa30.49■■■□□ 2.47
TRAF3IP1-203ENST00000409739 CELSR3Q9NYQ7 3312 aa30.48■■■□□ 2.47
TRAF3IP1-203ENST00000409739 IGHV5-10-1A0A0J9YXX1 117 aa30.48■■■□□ 2.47
TRAF3IP1-203ENST00000409739 TAF4O00268 1085 aa30.48■■■□□ 2.47
TRAF3IP1-203ENST00000409739 FTH1P02794 183 aa30.48■■■□□ 2.47
TRAF3IP1-203ENST00000409739 TTPAP49638 278 aa30.48■■■□□ 2.47
TRAF3IP1-203ENST00000409739 LIMK2P53671 638 aa30.48■■■□□ 2.47
TRAF3IP1-203ENST00000409739 ZNF669Q96BR6 464 aaPredicted RBP30.48■■■□□ 2.47
TRAF3IP1-203ENST00000409739 PRR11Q96HE9 360 aaPredicted RBP30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms