RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 EOGTQ5NDL2 527 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 ARCQ7LC44 396 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 C17orf64Q86WR6 236 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 EFHD1Q9BUP0 239 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 CFHR5Q9BXR6 569 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 KCNK12Q9HB15 430 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 EIF2B3Q9NR50 452 aaKnown RBP11.24□□□□□ -0.61
SNX13-202ENST00000409604 OR1F1O43749 312 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 RNGTTO60942 597 aaKnown RBP11.24□□□□□ -0.61
SNX13-202ENST00000409604 SLC7A9P82251 487 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 MINDY4Q4G0A6 757 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 NCEH1Q6PIU2 408 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 FAM20CQ8IXL6 584 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 NRSN1Q8IZ57 195 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 TFGQ92734 400 aaPredicted RBP11.24□□□□□ -0.61
SNX13-202ENST00000409604 ASB16Q96NS5 453 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 OLFM3Q96PB7 478 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 EBF4Q9BQW3 602 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 UBE2ZQ9H832 354 aaPredicted RBP11.24□□□□□ -0.61
SNX13-202ENST00000409604 CAAP1Q9H8G2 361 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 ZNF490Q9ULM2 529 aaPredicted RBP11.24□□□□□ -0.61
SNX13-202ENST00000409604 PLXNB2O15031 1838 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 ARFGEF1Q9Y6D6 1849 aa11.24□□□□□ -0.61
SNX13-202ENST00000409604 MYOCOSA0A1B0GUC4 107 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 ANTXRLA6NF34 631 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 SNX3O60493 162 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 ATP1B2P14415 290 aaPredicted RBP11.23□□□□□ -0.61
SNX13-202ENST00000409604 ECHS1P30084 290 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 HYAL1Q12794 435 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 RANBP10Q6VN20 620 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 SFTPA1Q8IWL2 248 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 MDGA1Q8NFP4 955 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 FOXJ1Q92949 421 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 FAM162AQ96A26 154 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 TRMT2BQ96GJ1 504 aaKnown RBP11.23□□□□□ -0.61
SNX13-202ENST00000409604 TUBB6Q9BUF5 446 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 TTLL2Q9BWV7 592 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 ZDHHC3Q9NYG2 299 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 POLR3HQ9Y535 204 aaPredicted RBP11.23□□□□□ -0.61
SNX13-202ENST00000409604 A0A0J9YVX5 310 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 GRID2O43424 1007 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 TGFB1P01137 390 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 COX7A2P14406 83 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 EPORP19235 508 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 PRKCHP24723 683 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 STC1P52823 247 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 C18orf21Q32NC0 220 aaPredicted RBP11.23□□□□□ -0.61
SNX13-202ENST00000409604 DUS1LQ6P1R4 473 aaKnown RBP11.23□□□□□ -0.61
SNX13-202ENST00000409604 GPR149Q86SP6 731 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 GPR26Q8NDV2 337 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 SLCO2A1Q92959 643 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 SHDQ96IW2 340 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 BBS4Q96RK4 519 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 IL26Q9NPH9 171 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 MRPL40Q9NQ50 206 aaKnown RBP11.23□□□□□ -0.61
SNX13-202ENST00000409604 NFS1Q9Y697 457 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 RGSL1A5PLK6 1076 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 RHPN2P1A8MT19 583 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 ADRB3P13945 408 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 AQP1P29972 269 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 ATP6V0D1P61421 351 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 CLCQ05315 142 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 MAPRE2Q15555 327 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 DUSP6Q16828 381 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 PARS2Q7L3T8 475 aaKnown RBP11.23□□□□□ -0.61
SNX13-202ENST00000409604 RRM2BQ7LG56 351 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 HSD11B1LQ7Z5J1 315 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 C12orf40Q86WS4 652 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 NXPE1Q8N323 547 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 CDRT15Q96T59 188 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 MIPEPQ99797 713 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 EQTNQ9NQ60 294 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 PCDHB1Q9Y5F3 818 aa11.23□□□□□ -0.61
SNX13-202ENST00000409604 PRR5-ARHGAP8B1AHC4 643 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 HDAC3O15379 428 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 ECI2O75521 394 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 CRHR1P34998 444 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 ARHGAP8P85298 464 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 NFE2L1Q14494 772 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 TCEAL1Q15170 157 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 CXorf57Q6NSI4 855 aaKnown RBP11.22□□□□□ -0.61
SNX13-202ENST00000409604 TSSK4Q6SA08 328 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 SUGP1Q8IWZ8 645 aaKnown RBP11.22□□□□□ -0.61
SNX13-202ENST00000409604 MAGEC3Q8TD91 643 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 FIG4Q92562 907 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 NSUN5Q96P11 429 aaKnown RBP11.22□□□□□ -0.61
SNX13-202ENST00000409604 NMUR2Q9GZQ4 415 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 NOL6Q9H6R4 1146 aaKnown RBP11.22□□□□□ -0.61
SNX13-202ENST00000409604 ACTR5Q9H9F9 607 aaPredicted RBP11.22□□□□□ -0.61
SNX13-202ENST00000409604 EFCAB1Q9HAE3 211 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 RXFP1Q9HBX9 757 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 GIMAP4Q9NUV9 329 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 INTS6Q9UL03 887 aaKnown RBP11.22□□□□□ -0.61
SNX13-202ENST00000409604 ATXN2Q99700 1313 aaKnown RBP11.22□□□□□ -0.61
SNX13-202ENST00000409604 OR52A4PA6NMU1 304 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 SERPINI2O75830 405 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 TCEA1P23193 301 aaKnown RBP11.22□□□□□ -0.61
SNX13-202ENST00000409604 SSR2P43308 183 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 NAB1Q13506 487 aa11.22□□□□□ -0.61
SNX13-202ENST00000409604 FLOT2Q14254 428 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms