RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 HEY2Q9UBP5 337 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 DUSP12Q9UNI6 340 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 OARD1Q9Y530 152 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 TRPM6Q9BX84 2022 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 PRR23AA6NEV1 266 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 TMEM233B4DJY2 109 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 STX16-NPEPL1H3BU86 382 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 EIF3FO00303 357 aaPredicted RBP13.82□□□□□ -0.2
GPNMB-203ENST00000409458 QSOX1O00391 747 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 UBFD1O14562 309 aaKnown RBP13.82□□□□□ -0.2
GPNMB-203ENST00000409458 STX16O14662 325 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 ATG13O75143 517 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 UBOX5O94941 541 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 RPS17P08708 135 aaKnown RBP13.82□□□□□ -0.2
GPNMB-203ENST00000409458 ENO3P13929 434 aaPredicted RBP13.82□□□□□ -0.2
GPNMB-203ENST00000409458 NDUFV2P19404 249 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 SERPINB3P29508 390 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 AGTR2P50052 363 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 ALDH18A1P54886 795 aaKnown RBP13.82□□□□□ -0.2
GPNMB-203ENST00000409458 SETDB1Q15047 1291 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 PHKG1Q16816 387 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 TTC31Q49AM3 519 aaPredicted RBP13.82□□□□□ -0.2
GPNMB-203ENST00000409458 EOGTQ5NDL2 527 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 SH2D4BQ5SQS7 431 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 PLEKHS1Q5SXH7 462 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 VWA5B1Q5TIE3 1220 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 FAM219BQ5XKK7 198 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 PNCKQ6P2M8 343 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 TMEM220Q6QAJ8 160 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 ADAMTSL4Q6UY14 1074 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 CUZD1Q86UP6 607 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 MAPK15Q8TD08 544 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 DLG3Q92796 817 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 SIPA1Q96FS4 1042 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 PRR11Q96HE9 360 aaPredicted RBP13.82□□□□□ -0.2
GPNMB-203ENST00000409458 MRGPRX1Q96LB2 322 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 LRRC37BQ96QE4 947 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 FAM126AQ9BYI3 521 aaPredicted RBP13.82□□□□□ -0.2
GPNMB-203ENST00000409458 OSBPL6Q9BZF3 934 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 OR2AG1Q9H205 316 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 KDM4CQ9H3R0 1056 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 COG4Q9H9E3 785 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 CD93Q9NPY3 652 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 MMP17Q9ULZ9 603 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 TMCO1Q9UM00 188 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 CDYLQ9Y232 598 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 ASB1Q9Y576 335 aa13.82□□□□□ -0.2
GPNMB-203ENST00000409458 ANKRD12Q6UB98 2062 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 ANKRD65E5RJM6 399 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 MATN2O00339 956 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 FFAR2O15552 330 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 NUAK1O60285 661 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 SNX2O60749 519 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 LILRB5O75023 590 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 SNUPNO95149 360 aaKnown RBP13.81□□□□□ -0.2
GPNMB-203ENST00000409458 C7P10643 843 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 IDH3AP50213 366 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 CDH13P55290 713 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 GALNT1Q10472 559 aaPredicted RBP13.81□□□□□ -0.2
GPNMB-203ENST00000409458 TUBB3Q13509 450 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 AGERQ15109 404 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 IRF4Q15306 451 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 BCL7AQ4VC05 210 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 KIAA1324Q6UXG2 1013 aaKnown RBP13.81□□□□□ -0.2
GPNMB-203ENST00000409458 Q6ZS52 159 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 MTDHQ86UE4 582 aaKnown RBP13.81□□□□□ -0.2
GPNMB-203ENST00000409458 HEATR4Q86WZ0 1026 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 TP53I13Q8NBR0 393 aaPredicted RBP13.81□□□□□ -0.2
GPNMB-203ENST00000409458 PDPRQ8NCN5 879 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 KLK6Q92876 244 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 COX14Q96I36 57 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 HIC2Q96JB3 615 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 CCM2Q9BSQ5 444 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 TRMOQ9BU70 441 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 ZCCHC2Q9C0B9 1178 aaKnown RBP13.81□□□□□ -0.2
GPNMB-203ENST00000409458 STN1Q9H668 368 aaKnown RBP13.81□□□□□ -0.2
GPNMB-203ENST00000409458 EML4Q9HC35 981 aaKnown RBP13.81□□□□□ -0.2
GPNMB-203ENST00000409458 MBNL1Q9NR56 388 aaKnown RBP13.81□□□□□ -0.2
GPNMB-203ENST00000409458 ATXN10Q9UBB4 475 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 FAM8A1Q9UBU6 413 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 CA14Q9ULX7 337 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 SCML1Q9UN30 329 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.81□□□□□ -0.2
GPNMB-203ENST00000409458 DOCK9Q9BZ29 2069 aa13.81□□□□□ -0.2
GPNMB-203ENST00000409458 A0A1W2PQU0 124 aa13.8□□□□□ -0.2
GPNMB-203ENST00000409458 TCRBV21S2A2A0A5A6 115 aa13.8□□□□□ -0.2
GPNMB-203ENST00000409458 KPNA5O15131 536 aa13.8□□□□□ -0.2
GPNMB-203ENST00000409458 RAD51BO15315 384 aa13.8□□□□□ -0.2
GPNMB-203ENST00000409458 GRID2O43424 1007 aa13.8□□□□□ -0.2
GPNMB-203ENST00000409458 RNGTTO60942 597 aaKnown RBP13.8□□□□□ -0.2
GPNMB-203ENST00000409458 GPC4O75487 556 aa13.8□□□□□ -0.2
GPNMB-203ENST00000409458 CDK14O94921 469 aa13.8□□□□□ -0.2
GPNMB-203ENST00000409458 JUNP05412 331 aaKnown RBP13.8□□□□□ -0.2
GPNMB-203ENST00000409458 MPC1LP0DKB6 136 aa13.8□□□□□ -0.2
GPNMB-203ENST00000409458 PBLDP30039 288 aaPredicted RBP13.8□□□□□ -0.2
GPNMB-203ENST00000409458 HK2P52789 917 aa13.8□□□□□ -0.2
GPNMB-203ENST00000409458 RPS21P63220 83 aaKnown RBP13.8□□□□□ -0.2
GPNMB-203ENST00000409458 CDK3Q00526 305 aa13.8□□□□□ -0.2
GPNMB-203ENST00000409458 ZBTB16Q05516 673 aa13.8□□□□□ -0.2
GPNMB-203ENST00000409458 C18orf21Q32NC0 220 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms