RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 ERVK-18Q9QC07 812 aa12.81□□□□□ -0.36
PTPRN-202ENST00000409251 ADAM28Q9UKQ2 775 aa12.81□□□□□ -0.36
PTPRN-202ENST00000409251 CDH9Q9ULB4 789 aa12.81□□□□□ -0.36
PTPRN-202ENST00000409251 SPO11Q9Y5K1 396 aa12.81□□□□□ -0.36
PTPRN-202ENST00000409251 STAU1O95793 577 aaKnown RBP12.8□□□□□ -0.36
PTPRN-202ENST00000409251 MLNP12872 115 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 SLC6A2P23975 617 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 HADHAP40939 763 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 CCT8P50990 548 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 DGKEP52429 567 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 KCNAB2Q13303 367 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 PSMD5Q16401 504 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 TCTN1Q2MV58 587 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 SMU1Q2TAY7 513 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 PAGE3Q5JUK9 113 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 DCLRE1AQ6PJP8 1040 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 TXNDC11Q6PKC3 985 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 RAB44Q7Z6P3 723 aaPredicted RBP12.8□□□□□ -0.36
PTPRN-202ENST00000409251 MFSD6LQ8IWD5 586 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 TERB1Q8NA31 727 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 OR13F1Q8NGS4 319 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 OLFM1Q99784 485 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 MRPL57Q9BQC6 102 aaKnown RBP12.8□□□□□ -0.36
PTPRN-202ENST00000409251 MLPHQ9BV36 600 aaPredicted RBP12.8□□□□□ -0.36
PTPRN-202ENST00000409251 WDR12Q9GZL7 423 aaKnown RBP12.8□□□□□ -0.36
PTPRN-202ENST00000409251 TNKS2Q9H2K2 1166 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 WDR6Q9NNW5 1121 aaKnown RBP12.8□□□□□ -0.36
PTPRN-202ENST00000409251 SLC30A1Q9Y6M5 507 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 ACRP10323 421 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 RFC2P35250 354 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 MASP1P48740 699 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 SOWAHCQ53LP3 525 aaPredicted RBP12.8□□□□□ -0.36
PTPRN-202ENST00000409251 VARS2Q5ST30 1063 aaKnown RBP12.8□□□□□ -0.36
PTPRN-202ENST00000409251 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.8□□□□□ -0.36
PTPRN-202ENST00000409251 GALNT10Q86SR1 603 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 FAM126BQ8IXS8 530 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 CDYL2Q8N8U2 506 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 RTP4Q96DX8 246 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 OMA1Q96E52 524 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 TEX37Q96LM6 180 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 NPY6RQ99463 290 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 IL37Q9NZH6 218 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 GMIPQ9P107 970 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 CNOT11Q9UKZ1 510 aaKnown RBP12.8□□□□□ -0.36
PTPRN-202ENST00000409251 URB1O60287 2271 aaKnown RBP12.8□□□□□ -0.36
PTPRN-202ENST00000409251 KNL1Q8NG31 2342 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 ABCB7O75027 752 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 RASAL1O95294 804 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 KPNA2P52292 529 aaKnown RBP12.8□□□□□ -0.36
PTPRN-202ENST00000409251 CD47Q08722 323 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 UGP2Q16851 508 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 C10orf120Q5SQS8 335 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 LHX8Q68G74 356 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 DESI1Q6ICB0 168 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 NEK5Q6P3R8 708 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 C4orf22Q6V702 233 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 KIAA0408Q6ZU52 694 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 ARMC8Q8IUR7 673 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 FAM86B1Q8N7N1 296 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 CELF2-AS1Q8N7Q2 184 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 BLOC1S5Q8TDH9 187 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 GPR78Q96P69 363 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 GPR22Q99680 433 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 MAGEE1Q9HCI5 957 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 OSER1Q9NX31 292 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 TMEM181Q9P2C4 612 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 ACTL7AQ9Y615 435 aa12.8□□□□□ -0.36
PTPRN-202ENST00000409251 ZFC3H1O60293 1989 aaKnown RBP12.79□□□□□ -0.36
PTPRN-202ENST00000409251 ADAM12O43184 909 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 CLASP2O75122 1294 aaKnown RBP12.79□□□□□ -0.36
PTPRN-202ENST00000409251 IL12AP29459 219 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 KCNC1P48547 511 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 TAF12Q16514 161 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 XKR4Q5GH76 650 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 CCSAPQ6IQ19 270 aaPredicted RBP12.79□□□□□ -0.36
PTPRN-202ENST00000409251 P2RY8Q86VZ1 359 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 OSCP1Q8WVF1 389 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 PROX1Q92786 737 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 IL22Q9GZX6 179 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 IRF2BPLQ9H1B7 796 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 CRISPLD1Q9H336 500 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 PTBP2Q9UKA9 531 aaKnown RBP12.79□□□□□ -0.36
PTPRN-202ENST00000409251 SMIM30A4D0T7 59 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 UBFD1O14562 309 aaKnown RBP12.79□□□□□ -0.36
PTPRN-202ENST00000409251 FAM20BO75063 409 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 ANGPTL1O95841 491 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 S100A5P33763 92 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 NPY2RP49146 381 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 HK2P52789 917 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 TRAP1Q12931 704 aaKnown RBP12.79□□□□□ -0.36
PTPRN-202ENST00000409251 ARL13BQ3SXY8 428 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 RSPO2Q6UXX9 243 aaPredicted RBP12.79□□□□□ -0.36
PTPRN-202ENST00000409251 GCNT7Q6ZNI0 430 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 CPSF7Q8N684 471 aaKnown RBP12.79□□□□□ -0.36
PTPRN-202ENST00000409251 FCRL2Q96LA5 508 aaPredicted RBP12.79□□□□□ -0.36
PTPRN-202ENST00000409251 PRDM16Q9HAZ2 1276 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 ENPP3O14638 875 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 PAGE1O75459 146 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 APOA1P02647 267 aa12.79□□□□□ -0.36
PTPRN-202ENST00000409251 CYBBP04839 570 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms