RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 RNF215Q9Y6U7 377 aa20.44■□□□□ 0.86
C4orf48-201ENST00000409248 CEP295Q9C0D2 2601 aa20.44■□□□□ 0.86
C4orf48-201ENST00000409248 KCNJ13O60928 360 aa20.43■□□□□ 0.86
C4orf48-201ENST00000409248 SPAG6O75602 509 aa20.43■□□□□ 0.86
C4orf48-201ENST00000409248 ACRV1P26436 265 aa20.43■□□□□ 0.86
C4orf48-201ENST00000409248 CLDN6P56747 220 aa20.43■□□□□ 0.86
C4orf48-201ENST00000409248 RBM44Q6ZP01 1051 aaKnown RBP20.43■□□□□ 0.86
C4orf48-201ENST00000409248 CAPN12Q6ZSI9 719 aa20.43■□□□□ 0.86
C4orf48-201ENST00000409248 MICALCLQ6ZW33 695 aa20.43■□□□□ 0.86
C4orf48-201ENST00000409248 SDCCAG8Q86SQ7 713 aaPredicted RBP20.43■□□□□ 0.86
C4orf48-201ENST00000409248 SERPINA9Q86WD7 417 aa20.43■□□□□ 0.86
C4orf48-201ENST00000409248 ZNF547Q8IVP9 402 aa20.43■□□□□ 0.86
C4orf48-201ENST00000409248 SFTPA2Q8IWL1 248 aa20.43■□□□□ 0.86
C4orf48-201ENST00000409248 LMNTD2Q8IXW0 634 aa20.43■□□□□ 0.86
C4orf48-201ENST00000409248 PIANPQ8IYJ0 282 aa20.43■□□□□ 0.86
C4orf48-201ENST00000409248 ARL14Q8N4G2 192 aa20.43■□□□□ 0.86
C4orf48-201ENST00000409248 RASGEF1AQ8N9B8 481 aa20.43■□□□□ 0.86
C4orf48-201ENST00000409248 CERS2Q96G23 380 aa20.43■□□□□ 0.86
C4orf48-201ENST00000409248 COPS8Q99627 209 aa20.43■□□□□ 0.86
C4orf48-201ENST00000409248 PLAC1Q9HBJ0 212 aa20.43■□□□□ 0.86
C4orf48-201ENST00000409248 IL1RAPL1Q9NZN1 696 aa20.43■□□□□ 0.86
C4orf48-201ENST00000409248 TBC1D29Q9UFV1 150 aa20.43■□□□□ 0.86
C4orf48-201ENST00000409248 KIR2DS5A0A0G2JLQ3 304 aa20.42■□□□□ 0.86
C4orf48-201ENST00000409248 A0A0G2JNG1 304 aa20.42■□□□□ 0.86
C4orf48-201ENST00000409248 OR5K4A6NMS3 321 aa20.42■□□□□ 0.86
C4orf48-201ENST00000409248 GOLGA8KD6RF30 607 aa20.42■□□□□ 0.86
C4orf48-201ENST00000409248 GOLGA8TH3BQL2 631 aa20.42■□□□□ 0.86
C4orf48-201ENST00000409248 KIR2DS3K7RE56 304 aa20.42■□□□□ 0.86
C4orf48-201ENST00000409248 PFDN6O15212 129 aa20.42■□□□□ 0.86
C4orf48-201ENST00000409248 SNX2O60749 519 aa20.42■□□□□ 0.86
C4orf48-201ENST00000409248 PRSS56P0CW18 603 aa20.42■□□□□ 0.86
C4orf48-201ENST00000409248 F3P13726 295 aa20.42■□□□□ 0.86
C4orf48-201ENST00000409248 CDKN1CP49918 316 aaPredicted RBP20.42■□□□□ 0.86
C4orf48-201ENST00000409248 TARDBPQ13148 414 aaKnown RBP eCLIP20.42■□□□□ 0.86
C4orf48-201ENST00000409248 KIR2DS5Q14953 304 aa20.42■□□□□ 0.86
C4orf48-201ENST00000409248 ZNF438Q7Z4V0 828 aa20.42■□□□□ 0.86
C4orf48-201ENST00000409248 SPRED1Q7Z699 444 aa20.42■□□□□ 0.86
C4orf48-201ENST00000409248 SFRP1Q8N474 314 aa20.42■□□□□ 0.86
C4orf48-201ENST00000409248 GPR150Q8NGU9 434 aa20.42■□□□□ 0.86
C4orf48-201ENST00000409248 SLC37A2Q8TED4 501 aa20.42■□□□□ 0.86
C4orf48-201ENST00000409248 PATE1Q8WXA2 126 aa20.42■□□□□ 0.86
C4orf48-201ENST00000409248 VPS37BQ9H9H4 285 aa20.42■□□□□ 0.86
C4orf48-201ENST00000409248 PPANQ9NQ55 473 aaKnown RBP20.42■□□□□ 0.86
C4orf48-201ENST00000409248 ZDHHC3Q9NYG2 299 aa20.42■□□□□ 0.86
C4orf48-201ENST00000409248 MARCH4Q9P2E8 410 aaPredicted RBP20.42■□□□□ 0.86
C4orf48-201ENST00000409248 RABGEF1Q9UJ41 708 aa20.42■□□□□ 0.86
C4orf48-201ENST00000409248 DNAJC16Q9Y2G8 782 aa20.42■□□□□ 0.86
C4orf48-201ENST00000409248 DNMT3AQ9Y6K1 912 aaPredicted RBP20.42■□□□□ 0.86
C4orf48-201ENST00000409248 KLHL33A6NCF5 533 aa20.41■□□□□ 0.86
C4orf48-201ENST00000409248 A6NCN8 305 aa20.41■□□□□ 0.86
C4orf48-201ENST00000409248 TMEM8BA6NDV4 472 aa20.41■□□□□ 0.86
C4orf48-201ENST00000409248 OR2AG2A6NM03 316 aa20.41■□□□□ 0.86
C4orf48-201ENST00000409248 CSO75390 466 aaKnown RBP20.41■□□□□ 0.86
C4orf48-201ENST00000409248 RPLP0P05388 317 aaKnown RBP20.41■□□□□ 0.86
C4orf48-201ENST00000409248 MYBL2P10244 700 aa20.41■□□□□ 0.86
C4orf48-201ENST00000409248 ERVK-10P10266 1014 aa20.41■□□□□ 0.86
C4orf48-201ENST00000409248 OGNP20774 298 aaKnown RBP20.41■□□□□ 0.86
C4orf48-201ENST00000409248 SSTR1P30872 391 aa20.41■□□□□ 0.86
C4orf48-201ENST00000409248 CA5AP35218 305 aa20.41■□□□□ 0.86
C4orf48-201ENST00000409248 FASLGP48023 281 aa20.41■□□□□ 0.86
C4orf48-201ENST00000409248 TTPAP49638 278 aa20.41■□□□□ 0.86
C4orf48-201ENST00000409248 CTSCP53634 463 aa20.41■□□□□ 0.86
C4orf48-201ENST00000409248 ITIH4Q14624 930 aa20.41■□□□□ 0.86
C4orf48-201ENST00000409248 NR1D2Q14995 579 aa20.41■□□□□ 0.86
C4orf48-201ENST00000409248 DBN1Q16643 649 aa20.41■□□□□ 0.86
C4orf48-201ENST00000409248 HSP90AA5PQ58FG0 334 aa20.41■□□□□ 0.86
C4orf48-201ENST00000409248 RNF187Q5TA31 235 aaPredicted RBP20.41■□□□□ 0.86
C4orf48-201ENST00000409248 ZNF470Q6ECI4 717 aa20.41■□□□□ 0.86
C4orf48-201ENST00000409248 TMEM220Q6QAJ8 160 aa20.41■□□□□ 0.86
C4orf48-201ENST00000409248 C3orf62Q6ZUJ4 267 aa20.41■□□□□ 0.86
C4orf48-201ENST00000409248 AMZ2Q86W34 360 aa20.41■□□□□ 0.86
C4orf48-201ENST00000409248 GRAMD1AQ96CP6 724 aa20.41■□□□□ 0.86
C4orf48-201ENST00000409248 NXPE2Q96DL1 559 aa20.41■□□□□ 0.86
C4orf48-201ENST00000409248 GFM1Q96RP9 751 aaKnown RBP20.41■□□□□ 0.86
C4orf48-201ENST00000409248 TMEM121BQ9BXQ6 578 aaPredicted RBP20.41■□□□□ 0.86
C4orf48-201ENST00000409248 PARD6BQ9BYG5 372 aa20.41■□□□□ 0.86
C4orf48-201ENST00000409248 CDC42EP4Q9H3Q1 356 aaKnown RBP20.41■□□□□ 0.86
C4orf48-201ENST00000409248 LRRC4CQ9HCJ2 640 aa20.41■□□□□ 0.86
C4orf48-201ENST00000409248 IARS2Q9NSE4 1012 aaKnown RBP20.41■□□□□ 0.86
C4orf48-201ENST00000409248 NINJ2Q9NZG7 142 aa20.41■□□□□ 0.86
C4orf48-201ENST00000409248 SLC23A2Q9UGH3 650 aa20.41■□□□□ 0.86
C4orf48-201ENST00000409248 COL27A1Q8IZC6 1860 aaPredicted RBP20.41■□□□□ 0.86
C4orf48-201ENST00000409248 PDZK1P1A8MUH7 402 aa20.4■□□□□ 0.86
C4orf48-201ENST00000409248 NTN3O00634 580 aaPredicted RBP20.4■□□□□ 0.86
C4orf48-201ENST00000409248 FAM153BP0C7A2 387 aa20.4■□□□□ 0.86
C4orf48-201ENST00000409248 IDSP22304 550 aa20.4■□□□□ 0.86
C4orf48-201ENST00000409248 STX2P32856 288 aa20.4■□□□□ 0.86
C4orf48-201ENST00000409248 PHBP35232 272 aa20.4■□□□□ 0.86
C4orf48-201ENST00000409248 GPR3P46089 330 aa20.4■□□□□ 0.86
C4orf48-201ENST00000409248 GPX6P59796 221 aa20.4■□□□□ 0.86
C4orf48-201ENST00000409248 DMPKQ09013 629 aa20.4■□□□□ 0.86
C4orf48-201ENST00000409248 MGAT5Q09328 741 aa20.4■□□□□ 0.86
C4orf48-201ENST00000409248 SEMA3AQ14563 771 aa20.4■□□□□ 0.86
C4orf48-201ENST00000409248 KYNUQ16719 465 aa20.4■□□□□ 0.86
C4orf48-201ENST00000409248 FAM153CQ494X1 144 aa20.4■□□□□ 0.86
C4orf48-201ENST00000409248 BCL7AQ4VC05 210 aa20.4■□□□□ 0.86
C4orf48-201ENST00000409248 ZNF449Q6P9G9 518 aa20.4■□□□□ 0.86
C4orf48-201ENST00000409248 TRMT10BQ6PF06 316 aaKnown RBP20.4■□□□□ 0.86
C4orf48-201ENST00000409248 IYDQ6PHW0 289 aa20.4■□□□□ 0.86
C4orf48-201ENST00000409248 DET1Q7L5Y6 550 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms