RNA–Protein interactions for RNA: ENST00000407418.7

CBX6-202, Transcript of chromobox 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBX6, Length 6,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-202ENST00000407418 HNRNPLP14866 589 aaKnown RBP eCLIP16.29■□□□□ 0.2
CBX6-202ENST00000407418 TMEM126BQ8IUX1 230 aa16.29■□□□□ 0.2
CBX6-202ENST00000407418 VANGL1Q8TAA9 524 aaPredicted RBP16.29■□□□□ 0.2
CBX6-202ENST00000407418 XAGE5Q8WWM1 108 aa16.29■□□□□ 0.2
CBX6-202ENST00000407418 NSUN3Q9H649 340 aaKnown RBP16.29■□□□□ 0.2
CBX6-202ENST00000407418 SDHAF3Q9NRP4 125 aa16.29■□□□□ 0.2
CBX6-202ENST00000407418 GMPPBQ9Y5P6 360 aa16.29■□□□□ 0.2
CBX6-202ENST00000407418 PDK4Q16654 411 aa16.29■□□□□ 0.2
CBX6-202ENST00000407418 EIPR1Q53HC9 387 aa16.29■□□□□ 0.2
CBX6-202ENST00000407418 RNF148Q8N7C7 305 aa16.29■□□□□ 0.2
CBX6-202ENST00000407418 COX18Q8N8Q8 333 aa16.29■□□□□ 0.2
CBX6-202ENST00000407418 IGSF21Q96ID5 467 aa16.29■□□□□ 0.2
CBX6-202ENST00000407418 RIOK2Q9BVS4 552 aaKnown RBP16.29■□□□□ 0.2
CBX6-202ENST00000407418 CYP8B1Q9UNU6 501 aa16.29■□□□□ 0.2
CBX6-202ENST00000407418 TRAF6Q9Y4K3 522 aa16.29■□□□□ 0.2
CBX6-202ENST00000407418 FAM221BA6H8Z2 402 aa16.29■□□□□ 0.2
CBX6-202ENST00000407418 F2P00734 622 aa16.29■□□□□ 0.2
CBX6-202ENST00000407418 ZNF8P17098 575 aaPredicted RBP16.29■□□□□ 0.2
CBX6-202ENST00000407418 PACS2Q86VP3 889 aa16.29■□□□□ 0.2
CBX6-202ENST00000407418 SIDT2Q8NBJ9 832 aaKnown RBP16.29■□□□□ 0.2
CBX6-202ENST00000407418 TMEM145Q8NBT3 493 aa16.29■□□□□ 0.2
CBX6-202ENST00000407418 BAP1Q92560 729 aa16.29■□□□□ 0.2
CBX6-202ENST00000407418 GPER1Q99527 375 aa16.29■□□□□ 0.2
CBX6-202ENST00000407418 CCM2Q9BSQ5 444 aa16.29■□□□□ 0.2
CBX6-202ENST00000407418 IPPKQ9H8X2 491 aa16.29■□□□□ 0.2
CBX6-202ENST00000407418 CAB39LQ9H9S4 337 aa16.29■□□□□ 0.2
CBX6-202ENST00000407418 B3GAT2Q9NPZ5 323 aa16.29■□□□□ 0.2
CBX6-202ENST00000407418 CFL2Q9Y281 166 aa16.29■□□□□ 0.2
CBX6-202ENST00000407418 IQCF5A8MTL0 148 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 CSF2RAP15509 400 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 RABGGTBP53611 331 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 MPP5Q8N3R9 675 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 ZNF527Q8NB42 609 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 TOR4AQ9NXH8 423 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 SAMD4AQ9UPU9 718 aaKnown RBP16.28■□□□□ 0.2
CBX6-202ENST00000407418 UPK3BL1B0FP48 263 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 UPK3BL2E5RIL1 263 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 HDAC3O15379 428 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 ZNF30P17039 623 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 MAPK10P53779 464 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 CHIT1Q13231 466 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 ZSWIM7Q19AV6 140 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 CLEC20AQ6ZU45 233 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 KRT74Q7RTS7 529 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 C4orf32Q8N8J7 132 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 RASSF5Q8WWW0 418 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 MIPEPQ99797 713 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 KIFC1Q9BW19 673 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 KNDC1Q76NI1 1749 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 NFAT5O94916 1531 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 CYB5AP00167 134 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 COX4I1P13073 169 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 RBMS1P29558 406 aaKnown RBP16.28■□□□□ 0.2
CBX6-202ENST00000407418 KIR3DL1P43629 444 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 PKNOX1P55347 436 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 SOWAHAQ2M3V2 549 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 GPR33Q49SQ1 333 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 PLD5Q8N7P1 536 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 ZNF461Q8TAF7 563 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 HDAC7Q8WUI4 952 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 FAM84AQ96KN4 292 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 FAM83CQ9BQN1 747 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 TXNRD2Q9NNW7 524 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 A6NCN8 305 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 SIN3BO75182 1162 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 CLEC3AO75596 197 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 IFI35P80217 286 aaPredicted RBP16.28■□□□□ 0.2
CBX6-202ENST00000407418 PIK3R6Q5UE93 754 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 C10orf107Q8IVU9 208 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 ACSS3Q9H6R3 686 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 CCSER2Q9H7U1 834 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.28■□□□□ 0.2
CBX6-202ENST00000407418 WASHC1A8K0Z3 465 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 WASH3PC4AMC7 463 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 PSME3P61289 254 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 SNTA1Q13424 505 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 WASH2PQ6VEQ5 465 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 NOL11Q9H8H0 719 aaKnown RBP16.28■□□□□ 0.2
CBX6-202ENST00000407418 LRCH1Q9Y2L9 728 aa16.28■□□□□ 0.2
CBX6-202ENST00000407418 SAMHD1Q9Y3Z3 626 aaKnown RBP16.28■□□□□ 0.2
CBX6-202ENST00000407418 RGSL1A5PLK6 1076 aa16.27■□□□□ 0.2
CBX6-202ENST00000407418 RGS8P57771 180 aaPredicted RBP16.27■□□□□ 0.2
CBX6-202ENST00000407418 GPR17Q13304 367 aa16.27■□□□□ 0.2
CBX6-202ENST00000407418 MYLK3Q32MK0 819 aa16.27■□□□□ 0.2
CBX6-202ENST00000407418 MLIPQ5VWP3 458 aa16.27■□□□□ 0.2
CBX6-202ENST00000407418 TMEM156Q8N614 296 aa16.27■□□□□ 0.2
CBX6-202ENST00000407418 RASSF1Q9NS23 344 aa16.27■□□□□ 0.2
CBX6-202ENST00000407418 HCAR3P49019 387 aa16.27■□□□□ 0.2
CBX6-202ENST00000407418 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.27■□□□□ 0.2
CBX6-202ENST00000407418 OR2AJ1Q8NGZ0 328 aa16.27■□□□□ 0.2
CBX6-202ENST00000407418 PCDHB18PQ96TA0 734 aa16.27■□□□□ 0.2
CBX6-202ENST00000407418 ZDHHC3Q9NYG2 299 aa16.27■□□□□ 0.2
CBX6-202ENST00000407418 ARMCX1Q9P291 453 aa16.27■□□□□ 0.2
CBX6-202ENST00000407418 YJEFN3A6XGL0 299 aa16.27■□□□□ 0.2
CBX6-202ENST00000407418 CST1P01037 141 aa16.27■□□□□ 0.2
CBX6-202ENST00000407418 PROCP04070 461 aa16.27■□□□□ 0.2
CBX6-202ENST00000407418 HSPA7P48741 367 aa16.27■□□□□ 0.2
CBX6-202ENST00000407418 RALGPS1Q5JS13 557 aa16.27■□□□□ 0.2
CBX6-202ENST00000407418 TSSK3Q96PN8 268 aa16.27■□□□□ 0.2
CBX6-202ENST00000407418 FAM192AQ9GZU8 254 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms