RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 AGO1Q9UL18 857 aaKnown RBP9.71□□□□□ -0.86
MSH2-202ENST00000406134 PCDHB3Q9Y5E6 796 aa9.71□□□□□ -0.86
MSH2-202ENST00000406134 ARNTLO00327 626 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 MAGEB3O15480 346 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 COQ9O75208 318 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 MLYCDO95822 493 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 LPOP22079 712 aaPredicted RBP9.7□□□□□ -0.86
MSH2-202ENST00000406134 CAPGP40121 348 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 GZMMP51124 257 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 MYBPC3Q14896 1274 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 TMTC4Q5T4D3 741 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 ACBD5Q5T8D3 534 aaPredicted RBP9.7□□□□□ -0.86
MSH2-202ENST00000406134 MBOAT4Q96T53 435 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 HAUS8Q9BT25 410 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 C9orf16Q9BUW7 83 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 TMEM161AQ9NX61 479 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 CHCHD3Q9NX63 227 aaKnown RBP9.7□□□□□ -0.86
MSH2-202ENST00000406134 RNF186Q9NXI6 227 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 ILVBLA1L0T0 632 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 GRXCR2A6NFK2 248 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 NRG2O14511 850 aaPredicted RBP9.7□□□□□ -0.86
MSH2-202ENST00000406134 FOXD2O60548 495 aaPredicted RBP9.7□□□□□ -0.86
MSH2-202ENST00000406134 ZNF821O75541 412 aaPredicted RBP9.7□□□□□ -0.86
MSH2-202ENST00000406134 ALPLP05186 524 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 CAPN1P07384 714 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 MZF1P28698 734 aaPredicted RBP9.7□□□□□ -0.86
MSH2-202ENST00000406134 MAP7Q14244 749 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 INPP5AQ14642 412 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 MFSD4BQ5TF39 518 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 RGMBQ6NW40 437 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 PATL1Q86TB9 770 aaKnown RBP9.7□□□□□ -0.86
MSH2-202ENST00000406134 IFNEQ86WN2 208 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 FAM81AQ8TBF8 368 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 EFHD1Q9BUP0 239 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 SCUBE2Q9NQ36 999 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 SMPD3Q9NY59 655 aaPredicted RBP9.7□□□□□ -0.86
MSH2-202ENST00000406134 LEF1Q9UJU2 399 aaPredicted RBP9.7□□□□□ -0.86
MSH2-202ENST00000406134 STOML2Q9UJZ1 356 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 ARIH1Q9Y4X5 557 aaPredicted RBP9.7□□□□□ -0.86
MSH2-202ENST00000406134 MTCL1Q9Y4B5 1905 aaKnown RBP9.7□□□□□ -0.86
MSH2-202ENST00000406134 MYOFQ9NZM1 2061 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 C2orf78A6NCI8 922 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 CCDC160A6NGH7 325 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 SYCE1LA8MT33 242 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 ZNF701M0R085 212 aaPredicted RBP9.7□□□□□ -0.86
MSH2-202ENST00000406134 CNPP09543 421 aaKnown RBP9.7□□□□□ -0.86
MSH2-202ENST00000406134 GGT1P19440 569 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 JAK1P23458 1154 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 ELK4P28324 431 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 RPS9P46781 194 aaKnown RBP9.7□□□□□ -0.86
MSH2-202ENST00000406134 PHC1P78364 1004 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 GEN1Q17RS7 908 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 ANKDD1AQ495B1 522 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 KRT80Q6KB66 452 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 CYP20A1Q6UW02 462 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 ZNF551Q7Z340 670 aaPredicted RBP9.7□□□□□ -0.86
MSH2-202ENST00000406134 ZSWIM9Q86XI8 627 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 GPSM1Q86YR5 675 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 HID1Q8IV36 788 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 ZNF786Q8N393 782 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 PIH1D2Q8WWB5 315 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 CHID1Q9BWS9 393 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 LRRC3Q9BY71 257 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 TMEM45AQ9NWC5 275 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 ZNHIT2Q9UHR6 403 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 DHRS7Q9Y394 339 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 FADS3Q9Y5Q0 445 aa9.7□□□□□ -0.86
MSH2-202ENST00000406134 NDUFS3O75489 264 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 ALPIP09923 528 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 RPL17P18621 184 aaKnown RBP9.69□□□□□ -0.86
MSH2-202ENST00000406134 PTPN6P29350 595 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 CORO1AP31146 461 aaKnown RBP9.69□□□□□ -0.86
MSH2-202ENST00000406134 OXCT1P55809 520 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 KCNK10P57789 538 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 RBBP7Q16576 425 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 ENPP6Q6UWR7 440 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 C16orf59Q7L2K0 433 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 TMEM179BQ7Z7N9 219 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 TRIML2Q8N7C3 387 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 ZNF548Q8NEK5 533 aaPredicted RBP9.69□□□□□ -0.86
MSH2-202ENST00000406134 SLC22A17Q8WUG5 538 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 RHBDF1Q96CC6 855 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 RMDN1Q96DB5 314 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 CCDC115Q96NT0 180 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 CSF3RQ99062 836 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 KLF16Q9BXK1 252 aaPredicted RBP9.69□□□□□ -0.86
MSH2-202ENST00000406134 TMEM165Q9HC07 324 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 SMPD4Q9NXE4 827 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 DNMT3LQ9UJW3 386 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 ANAPC2Q9UJX6 822 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 V9GYQ6 96 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 LRRK1Q38SD2 2015 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 DFNA5O60443 496 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 SNX2O60749 519 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 B3GALT4O96024 378 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 MATN1P21941 496 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 PIGAP37287 484 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 TM4SF4P48230 202 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 TTPAP49638 278 aa9.69□□□□□ -0.86
MSH2-202ENST00000406134 MLLT10P55197 1068 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms