RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 FAM90A26D6RGX4 464 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 TRIM77I1YAP6 450 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 TNFRSF13BO14836 293 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 SPINT2O43291 252 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 HTATSF1O43719 755 aaKnown RBP4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 VNN2O95498 520 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 GBAP04062 536 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 LCATP04180 440 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 PDGFRAP16234 1089 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 PRKCIP41743 596 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 RFX2P48378 723 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 ZP1P60852 638 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 UBXN1Q04323 297 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 TRAF1Q13077 416 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 CTTNQ14247 550 aaKnown RBP4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 MELKQ14680 651 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 MEP1AQ16819 746 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 GLIPR1L2Q4G1C9 344 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 FAM109BQ6ICB4 259 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 TATDN1Q6P1N9 297 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 ZNF534Q76KX8 674 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 MON1BQ7L1V2 547 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 ATAD1Q8NBU5 361 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 EXD1Q8NHP7 514 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 OCC1Q8TAD7 63 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 TBC1D16Q8TBP0 767 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 GRAPLQ8TC17 118 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 ROBO4Q8WZ75 1007 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 LPAR1Q92633 364 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 ERLEC1Q96DZ1 483 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 FZD8Q9H461 694 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 CNGB3Q9NQW8 809 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 ADPRHL2Q9NX46 363 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 LEF1Q9UJU2 399 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 TINAGQ9UJW2 476 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 ZNF580Q9UK33 172 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 CDH7Q9ULB5 785 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 CDC14AQ9UNH5 594 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 KLHL20Q9Y2M5 609 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 KCNK7Q9Y2U2 307 aa4.81□□□□□ -1.64
HMGB1P13-201ENST00000406019 I6L893 689 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 J3QR06 171 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 SLC30A4O14863 429 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 IFIT3O14879 490 aaKnown RBP4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 TIMM23O14925 209 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 TO15178 435 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 KCNN4O15554 427 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 SLC22A3O75751 556 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 MT-ND3P03897 115 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 FAM58BPP0C7Q3 252 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 TNFRSF8P28908 595 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 CDC25CP30307 473 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 CCKBRP32239 447 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 CLK1P49759 484 aaKnown RBP4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 HNRNPH2P55795 449 aaKnown RBP4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 CDK3Q00526 305 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 HSPB3Q12988 150 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 GAGE2BQ13066 116 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 NR1D2Q14995 579 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 GAGE2EQ4V326 116 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 KRTCAP3Q53RY4 240 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 WASHC2DQ5SRD0 308 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 RNASEH2BQ5TBB1 312 aaKnown RBP4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 DCAF12L2Q5VW00 463 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 KRT39Q6A163 491 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 GAGE2AQ6NT46 116 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 DUS1LQ6P1R4 473 aaKnown RBP4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 KCTD18Q6PI47 426 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 FIGLAQ6QHK4 219 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 Q6ZSV7 163 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 BHLHA9Q7RTU4 235 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 CTU1Q7Z7A3 348 aaKnown RBP4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 TMEM173Q86WV6 379 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 GCSAMQ8N6F7 178 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 PCDH20Q8N6Y1 951 aaKnown RBP4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 C7orf57Q8NEG2 295 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 ATL1Q8WXF7 558 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 MIB2Q96AX9 1013 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 SPSB1Q96BD6 273 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 ORAI1Q96D31 301 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 CABS1Q96KC9 395 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 APOLD1Q96LR9 279 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 LRFN5Q96NI6 719 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 MUS81Q96NY9 551 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 PI4K2AQ9BTU6 479 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 MOV10L1Q9BXT6 1211 aaKnown RBP4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 MMADHCQ9H3L0 296 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 GAGE2DQ9UEU5 116 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 SLC24A2Q9UI40 661 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 PCDHA7Q9UN72 937 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 LRP12Q9Y561 859 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 NFS1Q9Y697 457 aa4.8□□□□□ -1.64
HMGB1P13-201ENST00000406019 IGKV2D-30A0A075B6S6 120 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 GTPBP10A4D1E9 387 aaKnown RBP4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 TMEM221A6NGB7 291 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 MS4A18H0YCH9 400 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 ZIC3O60481 467 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 PLA2G2AP14555 144 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 CYP11B2P19099 503 aa4.79□□□□□ -1.64
HMGB1P13-201ENST00000406019 ITGB8P26012 769 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms