RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 KRT87PA6NCN2 255 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 UPK3BL1B0FP48 263 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 UPK3BL2E5RIL1 263 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 PRAMEF11O60813 436 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 VPS26AO75436 327 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 NDST3O95803 873 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 TSPAN12O95859 305 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 BCL10O95999 233 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 C1QCP02747 245 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 FUCA1P04066 466 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 THRBP10828 461 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 FCGR1AP12314 374 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 DCKP27707 260 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 ADARB1P78563 741 aaKnown RBP11.81□□□□□ -0.52
RBM39-206ENST00000403542 DUSP4Q13115 394 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 DGCR6Q14129 220 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 CYP2A13Q16696 494 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 AASDHQ4L235 1098 aaPredicted RBP11.81□□□□□ -0.52
RBM39-206ENST00000403542 VARS2Q5ST30 1063 aaKnown RBP11.81□□□□□ -0.52
RBM39-206ENST00000403542 DLEU7Q6UYE1 221 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 Q6ZNX1 250 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 ZDHHC13Q8IUH4 622 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 HID1Q8IV36 788 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 DENND1CQ8IV53 801 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 CENPSQ8N2Z9 138 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 OSCP1Q8WVF1 389 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 ASB2Q96Q27 587 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 CGREF1Q99674 301 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 PRM3Q9NNZ6 103 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 PCDHB3Q9Y5E6 796 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 SYCE1LA8MT33 242 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 G3V2T6 193 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 UPK1AO00322 258 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 GMNNO75496 209 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 DIRAS1O95057 198 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 ALPIP09923 528 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 PKMP14618 531 aaKnown RBP11.81□□□□□ -0.52
RBM39-206ENST00000403542 TACR2P21452 398 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 GSSP48637 474 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 GATMP50440 423 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 SPCS2Q15005 226 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 FAM117BQ6P1L5 589 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 RBM23Q86U06 439 aaKnown RBP11.81□□□□□ -0.52
RBM39-206ENST00000403542 CD200R1Q8TD46 325 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 SLC22A17Q8WUG5 538 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 EGFL8Q99944 293 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 BOCQ9BWV1 1114 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 SLC6A13Q9NSD5 602 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 TUBA8Q9NY65 449 aaPredicted RBP11.81□□□□□ -0.52
RBM39-206ENST00000403542 AFF4Q9UHB7 1163 aaKnown RBP11.81□□□□□ -0.52
RBM39-206ENST00000403542 ADGRE2Q9UHX3 823 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 PTBP2Q9UKA9 531 aaKnown RBP11.81□□□□□ -0.52
RBM39-206ENST00000403542 VPS4AQ9UN37 437 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 DNAH14Q0VDD8 3507 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 C2orf81A6NN90 581 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 WASH4PA8MWX3 477 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 H0Y626 953 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 STX7O15400 261 aaKnown RBP11.81□□□□□ -0.52
RBM39-206ENST00000403542 PRKD3O94806 890 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 INMTO95050 263 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 TRIM16O95361 564 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 ALPLP05186 524 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 HLCSP50747 726 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 ZNF140P52738 457 aaPredicted RBP11.81□□□□□ -0.52
RBM39-206ENST00000403542 PLA2G16P53816 162 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 EMX2Q04743 252 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 CBX3Q13185 183 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 DAG1Q14118 895 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 CTU2Q2VPK5 515 aaKnown RBP11.81□□□□□ -0.52
RBM39-206ENST00000403542 XKR7Q5GH72 579 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 SPRYD7Q5W111 196 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 SPATA19Q7Z5L4 167 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 C10orf111Q8N326 155 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 OR2T12Q8NG77 320 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 CNIH3Q8TBE1 160 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 ZC3H15Q8WU90 426 aaKnown RBP11.81□□□□□ -0.52
RBM39-206ENST00000403542 FAM162AQ96A26 154 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 AMBRA1Q9C0C7 1298 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 IPPKQ9H8X2 491 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 CD320Q9NPF0 282 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 SCUBE2Q9NQ36 999 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.81□□□□□ -0.521e-11■□□□□ 10.9
RBM39-206ENST00000403542 COQ6Q9Y2Z9 468 aa11.81□□□□□ -0.52
RBM39-206ENST00000403542 FAM234BA2RU67 622 aa11.8□□□□□ -0.52
RBM39-206ENST00000403542 F5H5T6 163 aa11.8□□□□□ -0.52
RBM39-206ENST00000403542 MITFO75030 526 aaPredicted RBP11.8□□□□□ -0.52
RBM39-206ENST00000403542 DEAF1O75398 565 aaPredicted RBP11.8□□□□□ -0.52
RBM39-206ENST00000403542 CAPN15O75808 1086 aa11.8□□□□□ -0.52
RBM39-206ENST00000403542 PRLP01236 227 aa11.8□□□□□ -0.52
RBM39-206ENST00000403542 HOXD9P28356 352 aaPredicted RBP11.8□□□□□ -0.52
RBM39-206ENST00000403542 CA5AP35218 305 aa11.8□□□□□ -0.52
RBM39-206ENST00000403542 RXRGP48443 463 aa11.8□□□□□ -0.52
RBM39-206ENST00000403542 SUOXP51687 545 aa11.8□□□□□ -0.52
RBM39-206ENST00000403542 FAM98BQ52LJ0 330 aaKnown RBP11.8□□□□□ -0.52
RBM39-206ENST00000403542 SPANXN4Q5MJ08 99 aa11.8□□□□□ -0.52
RBM39-206ENST00000403542 EGFLAMQ63HQ2 1017 aa11.8□□□□□ -0.52
RBM39-206ENST00000403542 XAF1Q6GPH4 301 aa11.8□□□□□ -0.52
RBM39-206ENST00000403542 FAM151BQ6UXP7 276 aa11.8□□□□□ -0.52
RBM39-206ENST00000403542 RSPO2Q6UXX9 243 aaPredicted RBP11.8□□□□□ -0.52
RBM39-206ENST00000403542 CCDC81Q6ZN84 652 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms