RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 USP53Q70EK8 1073 aa18.82■□□□□ 0.6
RTN4-207ENST00000402434 TMEM135Q86UB9 458 aa18.82■□□□□ 0.6
RTN4-207ENST00000402434 ZNF761Q86XN6 746 aaPredicted RBP18.82■□□□□ 0.6
RTN4-207ENST00000402434 SLITRK4Q8IW52 837 aa18.82■□□□□ 0.6
RTN4-207ENST00000402434 LIN37Q96GY3 246 aaPredicted RBP18.82■□□□□ 0.6
RTN4-207ENST00000402434 SIGLEC10Q96LC7 697 aa18.82■□□□□ 0.6
RTN4-207ENST00000402434 VPS37BQ9H9H4 285 aa18.82■□□□□ 0.6
RTN4-207ENST00000402434 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.82■□□□□ 0.6
RTN4-207ENST00000402434 MARCH4Q9P2E8 410 aaPredicted RBP18.82■□□□□ 0.6
RTN4-207ENST00000402434 ANAPC5Q9UJX4 755 aa18.82■□□□□ 0.6
RTN4-207ENST00000402434 PRSS21Q9Y6M0 314 aa18.82■□□□□ 0.6
RTN4-207ENST00000402434 A0A1W2PNU3 283 aaPredicted RBP18.81■□□□□ 0.6
RTN4-207ENST00000402434 CD3EAPO15446 510 aaKnown RBP18.81■□□□□ 0.6
RTN4-207ENST00000402434 OR1I1O60431 355 aa18.81■□□□□ 0.6
RTN4-207ENST00000402434 VAPBO95292 243 aa18.81■□□□□ 0.6
RTN4-207ENST00000402434 VIPP01282 170 aa18.81■□□□□ 0.6
RTN4-207ENST00000402434 ARCN1P48444 511 aaKnown RBP18.81■□□□□ 0.6
RTN4-207ENST00000402434 LSSP48449 732 aa18.81■□□□□ 0.6
RTN4-207ENST00000402434 INHBCP55103 352 aa18.81■□□□□ 0.6
RTN4-207ENST00000402434 CYP4F3Q08477 520 aa18.81■□□□□ 0.6
RTN4-207ENST00000402434 DHX34Q14147 1143 aaKnown RBP18.81■□□□□ 0.6
RTN4-207ENST00000402434 KIAA0930Q6ICG6 404 aaPredicted RBP18.81■□□□□ 0.6
RTN4-207ENST00000402434 ZNF574Q6ZN55 896 aaPredicted RBP18.81■□□□□ 0.6
RTN4-207ENST00000402434 TMEM26Q6ZUK4 368 aa18.81■□□□□ 0.6
RTN4-207ENST00000402434 TRIM48Q8IWZ4 208 aa18.81■□□□□ 0.6
RTN4-207ENST00000402434 RBM12BQ8IXT5 1001 aaKnown RBP18.81■□□□□ 0.6
RTN4-207ENST00000402434 CFAP206Q8IYR0 622 aa18.81■□□□□ 0.6
RTN4-207ENST00000402434 AGGF1Q8N302 714 aaeCLIP18.81■□□□□ 0.6
RTN4-207ENST00000402434 SPATA4Q8NEY3 305 aa18.81■□□□□ 0.6
RTN4-207ENST00000402434 OR10G6Q8NH81 332 aa18.81■□□□□ 0.6
RTN4-207ENST00000402434 DPYSL5Q9BPU6 564 aa18.81■□□□□ 0.6
RTN4-207ENST00000402434 NUDT22Q9BRQ3 303 aa18.81■□□□□ 0.6
RTN4-207ENST00000402434 FOXP3Q9BZS1 431 aa18.81■□□□□ 0.6
RTN4-207ENST00000402434 EPB41L1Q9H4G0 881 aa18.81■□□□□ 0.6
RTN4-207ENST00000402434 CCDC86Q9H6F5 360 aaKnown RBP18.81■□□□□ 0.6
RTN4-207ENST00000402434 POLR1BQ9H9Y6 1135 aa18.81■□□□□ 0.6
RTN4-207ENST00000402434 SAMD15Q9P1V8 674 aa18.81■□□□□ 0.6
RTN4-207ENST00000402434 PSMD13Q9UNM6 376 aa18.81■□□□□ 0.6
RTN4-207ENST00000402434 TTI1O43156 1089 aa18.8■□□□□ 0.6
RTN4-207ENST00000402434 TTPAP49638 278 aa18.8■□□□□ 0.6
RTN4-207ENST00000402434 RPE65Q16518 533 aa18.8■□□□□ 0.6
RTN4-207ENST00000402434 MAP9Q49MG5 647 aa18.8■□□□□ 0.6
RTN4-207ENST00000402434 NKAIN2Q5VXU1 208 aa18.8■□□□□ 0.6
RTN4-207ENST00000402434 IZUMO3Q5VZ72 239 aa18.8■□□□□ 0.6
RTN4-207ENST00000402434 CAPRIN2Q6IMN6 1127 aaKnown RBP18.8■□□□□ 0.6
RTN4-207ENST00000402434 CASC4Q6P4E1 433 aa18.8■□□□□ 0.6
RTN4-207ENST00000402434 WDR74Q6RFH5 385 aaPredicted RBP18.8■□□□□ 0.6
RTN4-207ENST00000402434 LILRA3Q8N6C8 439 aaPredicted RBP18.8■□□□□ 0.6
RTN4-207ENST00000402434 OR4D9Q8NGE8 314 aa18.8■□□□□ 0.6
RTN4-207ENST00000402434 MDM1Q8TC05 714 aa18.8■□□□□ 0.6
RTN4-207ENST00000402434 CXorf40BQ96DE9 158 aa18.8■□□□□ 0.6
RTN4-207ENST00000402434 PDP2Q9P2J9 529 aa18.8■□□□□ 0.6
RTN4-207ENST00000402434 DMXL2Q8TDJ6 3036 aa18.8■□□□□ 0.6
RTN4-207ENST00000402434 CCDC187A0A096LP49 1063 aa18.79■□□□□ 0.6
RTN4-207ENST00000402434 PRAMEF33A0A0G2JMD5 474 aa18.79■□□□□ 0.6
RTN4-207ENST00000402434 DXOO77932 396 aaKnown RBP18.79■□□□□ 0.6
RTN4-207ENST00000402434 MPOP05164 745 aa18.79■□□□□ 0.6
RTN4-207ENST00000402434 OR56A5P0C7T3 313 aa18.79■□□□□ 0.6
RTN4-207ENST00000402434 HOXB3P14651 431 aaPredicted RBP18.79■□□□□ 0.6
RTN4-207ENST00000402434 CSF2RBP32927 897 aa18.79■□□□□ 0.6
RTN4-207ENST00000402434 RPA4Q13156 261 aa18.79■□□□□ 0.6
RTN4-207ENST00000402434 ANKRD20A4Q4UJ75 823 aa18.79■□□□□ 0.6
RTN4-207ENST00000402434 IGF2-ASQ6U949 168 aa18.79■□□□□ 0.6
RTN4-207ENST00000402434 SPDYE1Q8NFV5 336 aaPredicted RBP18.79■□□□□ 0.6
RTN4-207ENST00000402434 ZCCHC14Q8WYQ9 949 aaKnown RBP18.79■□□□□ 0.6
RTN4-207ENST00000402434 AHCYL2Q96HN2 611 aaKnown RBP18.79■□□□□ 0.6
RTN4-207ENST00000402434 C16orf45Q96MC5 204 aaPredicted RBP18.79■□□□□ 0.6
RTN4-207ENST00000402434 FCRL3Q96P31 734 aaPredicted RBP18.79■□□□□ 0.6
RTN4-207ENST00000402434 INSM2Q96T92 566 aaPredicted RBP18.79■□□□□ 0.6
RTN4-207ENST00000402434 KRT12Q99456 494 aa18.79■□□□□ 0.6
RTN4-207ENST00000402434 STRADBQ9C0K7 418 aa18.79■□□□□ 0.6
RTN4-207ENST00000402434 WWP1Q9H0M0 922 aa18.79■□□□□ 0.6
RTN4-207ENST00000402434 SEMA6CQ9H3T2 930 aa18.79■□□□□ 0.6
RTN4-207ENST00000402434 COG4Q9H9E3 785 aa18.79■□□□□ 0.6
RTN4-207ENST00000402434 FAM8A1Q9UBU6 413 aa18.79■□□□□ 0.6
RTN4-207ENST00000402434 PCDHGA8Q9Y5G5 932 aa18.79■□□□□ 0.6
RTN4-207ENST00000402434 AK5Q9Y6K8 562 aa18.79■□□□□ 0.6
RTN4-207ENST00000402434 ZCWPW2A0A1B0GU75 182 aa18.78■□□□□ 0.6
RTN4-207ENST00000402434 SMAPO00193 183 aa18.78■□□□□ 0.6
RTN4-207ENST00000402434 DUX1O43812 170 aa18.78■□□□□ 0.6
RTN4-207ENST00000402434 FTH1P02794 183 aa18.78■□□□□ 0.6
RTN4-207ENST00000402434 POLBP06746 335 aa18.78■□□□□ 0.6
RTN4-207ENST00000402434 MTHFD1P11586 935 aaKnown RBP18.78■□□□□ 0.6
RTN4-207ENST00000402434 PAMP19021 973 aa18.78■□□□□ 0.6
RTN4-207ENST00000402434 LIMK2P53671 638 aa18.78■□□□□ 0.6
RTN4-207ENST00000402434 EIF3IQ13347 325 aaKnown RBP18.78■□□□□ 0.6
RTN4-207ENST00000402434 GPR18Q14330 331 aa18.78■□□□□ 0.6
RTN4-207ENST00000402434 MORF4L2Q15014 288 aa18.78■□□□□ 0.6
RTN4-207ENST00000402434 TMEM71Q6P5X7 295 aa18.78■□□□□ 0.6
RTN4-207ENST00000402434 ZNF572Q7Z3I7 529 aaPredicted RBP18.78■□□□□ 0.6
RTN4-207ENST00000402434 LDB1Q86U70 411 aaPredicted RBP18.78■□□□□ 0.6
RTN4-207ENST00000402434 GPR150Q8NGU9 434 aa18.78■□□□□ 0.6
RTN4-207ENST00000402434 WDR36Q8NI36 951 aaKnown RBP18.78■□□□□ 0.6
RTN4-207ENST00000402434 ZFPM2Q8WW38 1151 aa18.78■□□□□ 0.6
RTN4-207ENST00000402434 PRR11Q96HE9 360 aaPredicted RBP18.78■□□□□ 0.6
RTN4-207ENST00000402434 TRIM56Q9BRZ2 755 aaKnown RBP18.78■□□□□ 0.6
RTN4-207ENST00000402434 TRIM51Q9BSJ1 452 aa18.78■□□□□ 0.6
RTN4-207ENST00000402434 TBC1D10AQ9BXI6 508 aa18.78■□□□□ 0.6
RTN4-207ENST00000402434 OR52A5Q9H2C5 316 aa18.78■□□□□ 0.6
RTN4-207ENST00000402434 SATB2Q9UPW6 733 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms