RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 FAM120BQ96EK7 910 aaKnown RBP12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 UROC1Q96N76 676 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 OR52E6Q96RD3 313 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 PARVBQ9HBI1 364 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 OLA1Q9NTK5 396 aaKnown RBP12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 TRPM5Q9NZQ8 1165 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 OPTCQ9UBM4 332 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 CD84Q9UIB8 345 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 PCTPQ9UKL6 214 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 EIF3LQ9Y262 564 aaKnown RBP12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 OAS3Q9Y6K5 1087 aaKnown RBP12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 SLC38A8A6NNN8 435 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 SEPT4O43236 478 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 TBC1D4O60343 1298 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 ULK1O75385 1050 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 B3GALT4O96024 378 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 NTRK1P04629 796 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 WEE1P30291 646 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 POLR2IP36954 125 aaKnown RBP12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 ERVK-8P63133 956 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 PYCR3Q53H96 274 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 RNF180Q86T96 592 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 TBC1D21Q8IYX1 336 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 DTWD1Q8N5C7 304 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 NCSTNQ92542 709 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 NSMCE3Q96MG7 304 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 ZNF599Q96NL3 588 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 MYOCQ99972 504 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 RIBC2Q9H4K1 309 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 STARD7Q9NQZ5 370 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 COMMD8Q9NX08 183 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 HSFX1Q9UBD0 423 aa12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 ZNF490Q9ULM2 529 aaPredicted RBP12.49□□□□□ -0.41
PPP4R1-202ENST00000400555 TYW5A2RUC4 315 aaKnown RBP12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 KLHL33A6NCF5 533 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 C2orf78A6NCI8 922 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 PRMT5O14744 637 aaPredicted RBP12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 PRKD3O94806 890 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 BMP2P12643 396 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 HOXC13P31276 330 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 SLC11A1P49279 550 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 ALDH7A1P49419 539 aaKnown RBP12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 RGS4P49798 205 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 CLCN2P51788 898 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 APOFQ13790 326 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 ITIH5Q86UX2 942 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 IFNL1Q8IU54 200 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 ERI1Q8IV48 349 aaKnown RBP12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 LIX1Q8N485 282 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 WBP2Q969T9 261 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 NRBF2Q96F24 287 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 SCLYQ96I15 445 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 MYRFLQ96LU7 910 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 TDRD1Q9BXT4 1180 aaKnown RBP12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 DERL2Q9GZP9 239 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 ATG10Q9H0Y0 220 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 TBC1D23Q9NUY8 699 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 ARL15Q9NXU5 204 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 ZNF225Q9UK10 706 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 ORC6Q9Y5N6 252 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 MKI67P46013 3256 aaKnown RBP12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 BRCA1P38398 1863 aaKnown RBP12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 G3V2T6 193 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 CLDN7O95471 211 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 FTH1P02794 183 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 ANXA6P08133 673 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 FCGR1AP12314 374 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 ITPKAP23677 461 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 RFC2P35250 354 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 C21orf59P57076 290 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 TIAL1Q01085 375 aaKnown RBP eCLIP12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 MAPK11Q15759 364 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 GOLGA7Q7Z5G4 137 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 TMEM199Q8N511 208 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 MINDY1Q8N5J2 469 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 ANKFN1Q8N957 763 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 PKMYT1Q99640 499 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 CGREF1Q99674 301 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 ANKRD60Q9BZ19 345 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 PCDH12Q9NPG4 1184 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 AGPAT4Q9NRZ5 378 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 AIG1Q9NVV5 245 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 ZFC3H1O60293 1989 aaKnown RBP12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 RAD51BO15315 384 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 FFAR2O15552 330 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 AP1G1O43747 822 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 BCL10O95999 233 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 CKMP06732 381 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 GJA1P17302 382 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 OGNP20774 298 aaKnown RBP12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 HTR7P34969 479 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 FAM189BP81408 668 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 TAF1AQ15573 450 aaPredicted RBP12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 SPATA19Q7Z5L4 167 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 ZC3H7AQ8IWR0 971 aaKnown RBP12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 PROKR1Q8TCW9 393 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 NLE1Q9NVX2 485 aaPredicted RBP12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 WDR90Q96KV7 1748 aa12.48□□□□□ -0.41
PPP4R1-202ENST00000400555 GON4LQ3T8J9 2241 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 MANSC4A6NHS7 340 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms