RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 FMO3P31513 532 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 AFF1P51825 1210 aaKnown RBP13.8□□□□□ -0.2
APOB-202ENST00000399256 GRIK2Q13002 908 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 SLC13A2Q13183 592 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 TOP3AQ13472 1001 aaPredicted RBP13.8□□□□□ -0.2
APOB-202ENST00000399256 CATSPEREQ5SY80 951 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 MARC1Q5VT66 337 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 CST9Q5W186 159 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 BEND5Q7L4P6 421 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 PIK3C3Q8NEB9 887 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 PJA1Q8NG27 643 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 OR6Q1Q8NGQ2 317 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 PSMA8Q8TAA3 256 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 HTRA1Q92743 480 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 RORBQ92753 470 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 KIAA1191Q96A73 305 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 HMCESQ96FZ2 354 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 RDH12Q96NR8 316 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 RBM4BQ9BQ04 359 aaKnown RBP13.8□□□□□ -0.2
APOB-202ENST00000399256 RBM4Q9BWF3 364 aaKnown RBP13.8□□□□□ -0.2
APOB-202ENST00000399256 UGT2B28Q9BY64 529 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 SMOC2Q9H3U7 446 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 EHD1Q9H4M9 534 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 ADGRE2Q9UHX3 823 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 ATP11BQ9Y2G3 1177 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 SLC22A1O15245 554 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 DFNA5O60443 496 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 G6PDP11413 515 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 LHX1P48742 406 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 NKX2-5P52952 324 aaPredicted RBP13.8□□□□□ -0.2
APOB-202ENST00000399256 MRNIPQ6NTE8 343 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 Q8N9G6 341 aaPredicted RBP13.8□□□□□ -0.2
APOB-202ENST00000399256 C3orf58Q8NDZ4 430 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 TTC16Q8NEE8 873 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 MS4A4AQ96JQ5 239 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 ZNF583Q96ND8 569 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 AARSD1Q9BTE6 412 aaKnown RBP13.8□□□□□ -0.2
APOB-202ENST00000399256 TBCDQ9BTW9 1192 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 ACTR8Q9H981 624 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.8□□□□□ -0.22e-38■□□□□ 9.6
APOB-202ENST00000399256 FBXO10Q9UK96 956 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 PNMA8BQ9ULN7 279 aaPredicted RBP13.8□□□□□ -0.2
APOB-202ENST00000399256 ERVK-11Q9UQG0 969 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 HS3ST4Q9Y661 456 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 PTCH2Q9Y6C5 1203 aa13.8□□□□□ -0.2
APOB-202ENST00000399256 BTN3A1O00481 513 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 IGLV3-25P01717 112 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 ATXN1LP0C7T5 689 aaKnown RBP13.79□□□□□ -0.2
APOB-202ENST00000399256 PSMB9P28065 219 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 RENBPP51606 427 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 CLCNKBP51801 687 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 EPS8Q12929 822 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 GALNT3Q14435 633 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 ZNF691Q5VV52 312 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 AFMIDQ63HM1 303 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 TWF2Q6IBS0 349 aaKnown RBP13.79□□□□□ -0.2
APOB-202ENST00000399256 TXNDC11Q6PKC3 985 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 DNAJC14Q6Y2X3 702 aaPredicted RBP13.79□□□□□ -0.2
APOB-202ENST00000399256 NECAB2Q7Z6G3 386 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 GALNT5Q7Z7M9 940 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 OR2T12Q8NG77 320 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 OR10A6Q8NH74 314 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 NUSAP1Q9BXS6 441 aaKnown RBP13.79□□□□□ -0.2
APOB-202ENST00000399256 CATSPERZQ9NTU4 200 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 EIF2B4Q9UI10 523 aaKnown RBP13.79□□□□□ -0.2
APOB-202ENST00000399256 PCTPQ9UKL6 214 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 MGEA5O60502 916 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 TCEA1P23193 301 aaKnown RBP13.79□□□□□ -0.2
APOB-202ENST00000399256 SERPINB1P30740 379 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 SERPINB10P48595 397 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 SUOXP51687 545 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 CDK5R2Q13319 367 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 HIST2H2ACQ16777 129 aaPredicted RBP13.79□□□□□ -0.2
APOB-202ENST00000399256 PAGE2Q7Z2X7 111 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 LGI2Q8N0V4 545 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 DPP10Q8N608 796 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 THUMPD3Q9BV44 507 aaKnown RBP13.79□□□□□ -0.2
APOB-202ENST00000399256 MROH8Q9H579 483 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 RMND5AQ9H871 391 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 FBXO8Q9NRD0 319 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 ABCB10Q9NRK6 738 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 OSER1Q9NX31 292 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 VAPAQ9P0L0 249 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 INTS6Q9UL03 887 aaKnown RBP13.79□□□□□ -0.2
APOB-202ENST00000399256 NAALAD2Q9Y3Q0 740 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 PSMD11O00231 422 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 MITFO75030 526 aaPredicted RBP13.79□□□□□ -0.2
APOB-202ENST00000399256 PRKD3O94806 890 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 SEC24AO95486 1093 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 ANGPTL1O95841 491 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 FTH1P02794 183 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 CYP4B1P13584 511 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 PFKLP17858 780 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 CD40LGP29965 261 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 GRIK1P39086 918 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 MRPL19P49406 292 aaKnown RBP13.79□□□□□ -0.2
APOB-202ENST00000399256 HTR6P50406 440 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 IL1RL1Q01638 556 aa13.79□□□□□ -0.2
APOB-202ENST00000399256 ILF2Q12905 390 aaKnown RBP13.79□□□□□ -0.2
APOB-202ENST00000399256 RAPSNQ13702 412 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms