RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 GALNT13Q8IUC8 556 aa13.99□□□□□ -0.17
SKA1-202ENST00000398452 CEP97Q8IW35 865 aa13.99□□□□□ -0.17
SKA1-202ENST00000398452 KIAA2013Q8IYS2 634 aa13.99□□□□□ -0.17
SKA1-202ENST00000398452 MAML2Q8IZL2 1156 aaPredicted RBP13.99□□□□□ -0.17
SKA1-202ENST00000398452 PELI3Q8N2H9 469 aa13.99□□□□□ -0.17
SKA1-202ENST00000398452 DEFB119Q8N690 84 aa13.99□□□□□ -0.17
SKA1-202ENST00000398452 BANPQ8N9N5 519 aa13.99□□□□□ -0.17
SKA1-202ENST00000398452 SIDT2Q8NBJ9 832 aaKnown RBP13.99□□□□□ -0.17
SKA1-202ENST00000398452 ASZ1Q8WWH4 475 aa13.99□□□□□ -0.17
SKA1-202ENST00000398452 FUBP1Q96AE4 644 aaKnown RBP13.99□□□□□ -0.17
SKA1-202ENST00000398452 HSPA12BQ96MM6 686 aa13.99□□□□□ -0.17
SKA1-202ENST00000398452 WDR92Q96MX6 357 aa13.99□□□□□ -0.17
SKA1-202ENST00000398452 PAIP2Q9BPZ3 127 aaKnown RBP13.99□□□□□ -0.17
SKA1-202ENST00000398452 MKS1Q9NXB0 559 aa13.99□□□□□ -0.17
SKA1-202ENST00000398452 ZNHIT2Q9UHR6 403 aa13.99□□□□□ -0.17
SKA1-202ENST00000398452 RUVBL2Q9Y230 463 aaKnown RBP13.99□□□□□ -0.17
SKA1-202ENST00000398452 DHRS7Q9Y394 339 aa13.99□□□□□ -0.17
SKA1-202ENST00000398452 DNMT3AQ9Y6K1 912 aaPredicted RBP13.99□□□□□ -0.17
SKA1-202ENST00000398452 OAS3Q9Y6K5 1087 aaKnown RBP13.99□□□□□ -0.17
SKA1-202ENST00000398452 PLXNA2O75051 1894 aa13.99□□□□□ -0.17
SKA1-202ENST00000398452 EIF3FO00303 357 aaPredicted RBP13.98□□□□□ -0.17
SKA1-202ENST00000398452 KMOO15229 486 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 POLR3GO15318 223 aaPredicted RBP13.98□□□□□ -0.17
SKA1-202ENST00000398452 GRID2O43424 1007 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 NUAK1O60285 661 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 KLHL2O95198 593 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 RBP1P09455 135 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 SLC35E2BP0CK96 405 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 ENO3P13929 434 aaPredicted RBP13.98□□□□□ -0.17
SKA1-202ENST00000398452 ZNF37AP17032 561 aaPredicted RBP13.98□□□□□ -0.17
SKA1-202ENST00000398452 ZNF8P17098 575 aaPredicted RBP13.98□□□□□ -0.17
SKA1-202ENST00000398452 PBLDP30039 288 aaPredicted RBP13.98□□□□□ -0.17
SKA1-202ENST00000398452 CA5AP35218 305 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 HSPA14Q0VDF9 509 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 PLEKHS1Q5SXH7 462 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 PAQR3Q6TCH7 311 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 CRTC3Q6UUV7 619 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 Q6ZSR6 202 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 PIM3Q86V86 326 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 FRMD1Q8N878 549 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 ACVR1CQ8NER5 493 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 OR56A4Q8NGH8 313 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 MGARPQ8TDB4 240 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 TCP10LQ8TDR4 215 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 KCTD4Q8WVF5 259 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 LINGO1Q96FE5 620 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 KLHDC7BQ96G42 594 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 FOPNLQ96NB1 174 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 LATS2Q9NRM7 1088 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 INTS9Q9NV88 658 aaKnown RBP13.98□□□□□ -0.17
SKA1-202ENST00000398452 FAM8A1Q9UBU6 413 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 KLQ9UEF7 1012 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 EIF2B4Q9UI10 523 aaKnown RBP13.98□□□□□ -0.17
SKA1-202ENST00000398452 MYO15AQ9UKN7 3530 aa13.98□□□□□ -0.17
SKA1-202ENST00000398452 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.97□□□□□ -0.17
SKA1-202ENST00000398452 POM121BA6NF01 834 aa13.97□□□□□ -0.17
SKA1-202ENST00000398452 LIN7AO14910 233 aaPredicted RBP13.97□□□□□ -0.17
SKA1-202ENST00000398452 KCNJ13O60928 360 aa13.97□□□□□ -0.17
SKA1-202ENST00000398452 POP7O75817 140 aaKnown RBP13.97□□□□□ -0.17
SKA1-202ENST00000398452 THEGLP0DJG4 465 aa13.97□□□□□ -0.17
SKA1-202ENST00000398452 GNSP15586 552 aa13.97□□□□□ -0.17
SKA1-202ENST00000398452 TAC1P20366 129 aa13.97□□□□□ -0.17
SKA1-202ENST00000398452 CNR2P34972 360 aa13.97□□□□□ -0.17
SKA1-202ENST00000398452 MAPK9P45984 424 aa13.97□□□□□ -0.17
SKA1-202ENST00000398452 ATP1A2P50993 1020 aa13.97□□□□□ -0.17
SKA1-202ENST00000398452 CLCN7P51798 805 aa13.97□□□□□ -0.17
SKA1-202ENST00000398452 CTSCP53634 463 aa13.97□□□□□ -0.17
SKA1-202ENST00000398452 SLC18A1P54219 525 aa13.97□□□□□ -0.17
SKA1-202ENST00000398452 RACK1P63244 317 aaKnown RBP13.97□□□□□ -0.17
SKA1-202ENST00000398452 ACAP2Q15057 778 aa13.97□□□□□ -0.17
SKA1-202ENST00000398452 KHDC1Q4VXA5 237 aaKnown RBP13.97□□□□□ -0.17
SKA1-202ENST00000398452 N4BP2L1Q5TBK1 243 aaPredicted RBP13.97□□□□□ -0.17
SKA1-202ENST00000398452 KDM7AQ6ZMT4 941 aa13.97□□□□□ -0.17
SKA1-202ENST00000398452 GCNT7Q6ZNI0 430 aa13.97□□□□□ -0.17
SKA1-202ENST00000398452 FRA10AC1Q70Z53 315 aa13.97□□□□□ -0.17
SKA1-202ENST00000398452 AMZ2Q86W34 360 aa13.97□□□□□ -0.17
SKA1-202ENST00000398452 CPNE9Q8IYJ1 553 aa13.97□□□□□ -0.17
SKA1-202ENST00000398452 TMEFF1Q8IYR6 380 aa13.97□□□□□ -0.17
SKA1-202ENST00000398452 BEND7Q8N7W2 519 aaPredicted RBP13.97□□□□□ -0.17
SKA1-202ENST00000398452 HM13Q8TCT9 377 aa13.97□□□□□ -0.17
SKA1-202ENST00000398452 CD200R1Q8TD46 325 aa13.97□□□□□ -0.17
SKA1-202ENST00000398452 GAB3Q8WWW8 586 aa13.97□□□□□ -0.17
SKA1-202ENST00000398452 LGR4Q9BXB1 951 aa13.97□□□□□ -0.17
SKA1-202ENST00000398452 DUSP15Q9H1R2 295 aaPredicted RBP13.97□□□□□ -0.17
SKA1-202ENST00000398452 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.97□□□□□ -0.17
SKA1-202ENST00000398452 MBD1Q9UIS9 605 aaPredicted RBP13.97□□□□□ -0.17
SKA1-202ENST00000398452 GPSM3Q9Y4H4 160 aa13.97□□□□□ -0.17
SKA1-202ENST00000398452 WDR87Q6ZQQ6 2873 aa13.96□□□□□ -0.17
SKA1-202ENST00000398452 C17orf113A0A1B0GUU1 675 aa13.96□□□□□ -0.17
SKA1-202ENST00000398452 MGAT4DA6NG13 374 aa13.96□□□□□ -0.17
SKA1-202ENST00000398452 PRR5-ARHGAP8B1AHC4 643 aa13.96□□□□□ -0.17
SKA1-202ENST00000398452 TNFRSF10CO14798 259 aa13.96□□□□□ -0.17
SKA1-202ENST00000398452 TYROBPO43914 113 aa13.96□□□□□ -0.17
SKA1-202ENST00000398452 CREB1P16220 341 aa13.96□□□□□ -0.17
SKA1-202ENST00000398452 CD38P28907 300 aa13.96□□□□□ -0.17
SKA1-202ENST00000398452 RPA3P35244 121 aaPredicted RBP13.96□□□□□ -0.17
SKA1-202ENST00000398452 GNPDA1P46926 289 aa13.96□□□□□ -0.17
SKA1-202ENST00000398452 GLRBP48167 497 aa13.96□□□□□ -0.17
SKA1-202ENST00000398452 DHPSP49366 369 aaPredicted RBP13.96□□□□□ -0.17
SKA1-202ENST00000398452 BLKP51451 505 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms