RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 NEPROQ6NW34 567 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 SDCCAG8Q86SQ7 713 aaPredicted RBP20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 ZNF761Q86XN6 746 aaPredicted RBP20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 TRIM48Q8IWZ4 208 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 CFAP206Q8IYR0 622 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 AVL9Q8NBF6 648 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 WDR48Q8TAF3 677 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 NAT9Q9BTE0 207 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 GRHL1Q9NZI5 618 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 CPNE7Q9UBL6 633 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 CLCA2Q9UQC9 943 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 CHMP2BQ9UQN3 213 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 NEUROG3Q9Y4Z2 214 aa20.78■□□□□ 0.92
TSPAN4-206ENST00000397408 C17orf113A0A1B0GUU1 675 aa20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 A0A1W2PQM1 296 aa20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 CTAGE15A4D2H0 777 aa20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 PRMT5O14744 637 aaPredicted RBP20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 CTAGE8P0CG41 777 aa20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 JUPP14923 745 aa20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 OGNP20774 298 aaKnown RBP20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 ALDH4A1P30038 563 aa20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 SLC19A1P41440 591 aa20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 ELK3P41970 407 aa20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 OR1D5P58170 312 aa20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 THOC5Q13769 683 aaKnown RBP20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 SPIDRQ14159 915 aa20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 CLCA4Q14CN2 919 aa20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 TYSND1Q2T9J0 566 aa20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 ZNF470Q6ECI4 717 aa20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 CTAGE6Q86UF2 777 aa20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 IGDCC3Q8IVU1 814 aa20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 CTAGE4Q8IX94 777 aa20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 GPR150Q8NGU9 434 aa20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 CXorf40BQ96DE9 158 aa20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 SLC38A3Q99624 504 aa20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 WDR83Q9BRX9 315 aaKnown RBP20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 WWP1Q9H0M0 922 aa20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 LRRN3Q9H3W5 708 aa20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 COG4Q9H9E3 785 aa20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 C20orf96Q9NUD7 363 aaPredicted RBP20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 ZNF624Q9P2J8 865 aaPredicted RBP20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 ACSL5Q9ULC5 683 aa20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 FAM169AQ9Y6X4 670 aa20.77■□□□□ 0.91
TSPAN4-206ENST00000397408 UNC13CQ8NB66 2214 aa20.76■□□□□ 0.91
TSPAN4-206ENST00000397408 F8W8V4 182 aa20.76■□□□□ 0.91
TSPAN4-206ENST00000397408 NTN3O00634 580 aaPredicted RBP20.76■□□□□ 0.91
TSPAN4-206ENST00000397408 TTC4O95801 387 aa20.76■□□□□ 0.91
TSPAN4-206ENST00000397408 VIPP01282 170 aa20.76■□□□□ 0.91
TSPAN4-206ENST00000397408 GSTM1P09488 218 aa20.76■□□□□ 0.91
TSPAN4-206ENST00000397408 SLC35G4P0C7Q5 338 aa20.76■□□□□ 0.91
TSPAN4-206ENST00000397408 GPR3P46089 330 aa20.76■□□□□ 0.91
TSPAN4-206ENST00000397408 SLC7A5Q01650 507 aa20.76■□□□□ 0.91
TSPAN4-206ENST00000397408 GSTM4Q03013 218 aa20.76■□□□□ 0.91
TSPAN4-206ENST00000397408 AMZ1Q400G9 498 aa20.76■□□□□ 0.91
TSPAN4-206ENST00000397408 ZNF658BQ4V348 819 aaPredicted RBP20.76■□□□□ 0.91
TSPAN4-206ENST00000397408 RNF187Q5TA31 235 aaPredicted RBP20.76■□□□□ 0.91
TSPAN4-206ENST00000397408 RBM44Q6ZP01 1051 aaKnown RBP20.76■□□□□ 0.91
TSPAN4-206ENST00000397408 DCBLD1Q8N8Z6 715 aa20.76■□□□□ 0.91
TSPAN4-206ENST00000397408 ELMO1Q92556 727 aa20.76■□□□□ 0.91
TSPAN4-206ENST00000397408 LRRC39Q96DD0 335 aa20.76■□□□□ 0.91
TSPAN4-206ENST00000397408 GFM1Q96RP9 751 aaKnown RBP20.76■□□□□ 0.91
TSPAN4-206ENST00000397408 LRRC1Q9BTT6 524 aa20.76■□□□□ 0.91
TSPAN4-206ENST00000397408 POT1Q9NUX5 634 aa20.76■□□□□ 0.91
TSPAN4-206ENST00000397408 KCNK4Q9NYG8 393 aa20.76■□□□□ 0.91
TSPAN4-206ENST00000397408 UBA6A0AVT1 1052 aaPredicted RBP20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 PFDN6O15212 129 aa20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 TCEA3O75764 348 aa20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 ITGB6P18564 788 aa20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 XRCC1P18887 633 aaPredicted RBP20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 PDIA2Q13087 525 aaKnown RBP20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 TARDBPQ13148 414 aaKnown RBP eCLIP20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 SPANXN3Q5MJ09 141 aa20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 PTRHD1Q6GMV3 140 aaKnown RBP20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 CILP2Q8IUL8 1156 aa20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 UNC5BQ8IZJ1 945 aa20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 MMGT1Q8N4V1 131 aa20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 NOA1Q8NC60 698 aaKnown RBP20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 SPDYE1Q8NFV5 336 aaPredicted RBP20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 LKAAEAR1Q8TD35 194 aa20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 LPGAT1Q92604 370 aa20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 SH3KBP1Q96B97 665 aa20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 CFAP36Q96G28 342 aa20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 RMDN2Q96LZ7 410 aa20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 DEPDC7Q96QD5 511 aa20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 TCF12Q99081 682 aa20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 P2RY12Q9H244 342 aa20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 IMP3Q9NV31 184 aaKnown RBP20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 ZC3H7BQ9UGR2 993 aaKnown RBP20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 GNPTGQ9UJJ9 305 aa20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 ATXN7L1Q9ULK2 861 aaPredicted RBP20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 MSRB2Q9Y3D2 182 aa20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 TEX264Q9Y6I9 313 aa20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 COL27A1Q8IZC6 1860 aaPredicted RBP20.75■□□□□ 0.91
TSPAN4-206ENST00000397408 FAM221BA6H8Z2 402 aa20.74■□□□□ 0.91
TSPAN4-206ENST00000397408 D6RAR5 112 aa20.74■□□□□ 0.91
TSPAN4-206ENST00000397408 ZW10O43264 779 aa20.74■□□□□ 0.91
TSPAN4-206ENST00000397408 B4GAT1O43505 415 aa20.74■□□□□ 0.91
TSPAN4-206ENST00000397408 RPS3P23396 243 aaKnown RBP eCLIP20.74■□□□□ 0.916e-8■■■■■ 37.4
TSPAN4-206ENST00000397408 PREPP48147 710 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms