RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 NDNQ99608 321 aa14.71□□□□□ -0.05
CAPN3-207ENST00000397200 ZSCAN5AQ9BUG6 496 aa14.71□□□□□ -0.05
CAPN3-207ENST00000397200 C11orf16Q9NQ32 467 aa14.71□□□□□ -0.05
CAPN3-207ENST00000397200 TAGLN3Q9UI15 199 aa14.71□□□□□ -0.05
CAPN3-207ENST00000397200 MBD1Q9UIS9 605 aaPredicted RBP14.71□□□□□ -0.05
CAPN3-207ENST00000397200 APOBEC2Q9Y235 224 aaKnown RBP14.71□□□□□ -0.05
CAPN3-207ENST00000397200 STK38LQ9Y2H1 464 aa14.71□□□□□ -0.05
CAPN3-207ENST00000397200 PRR33A8MZF0 331 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 LTA4HP09960 611 aaKnown RBP14.7□□□□□ -0.06
CAPN3-207ENST00000397200 ITGALP20701 1170 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 ATP5F1P24539 256 aaPredicted RBP14.7□□□□□ -0.06
CAPN3-207ENST00000397200 GLRBP48167 497 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 RPL6Q02878 288 aaKnown RBP14.7□□□□□ -0.06
CAPN3-207ENST00000397200 CACNG1Q06432 222 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 DPTQ07507 201 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 FGL2Q14314 439 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 SEMA3AQ14563 771 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 CHRNA6Q15825 494 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 FAM83EQ2M2I3 478 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 SETMARQ53H47 684 aaPredicted RBP14.7□□□□□ -0.06
CAPN3-207ENST00000397200 WASHC2DQ5SRD0 308 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 AGAP9Q5VTM2 703 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 MRNIPQ6NTE8 343 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 RINLQ6ZS11 566 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 LSMEM2Q8N112 164 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 TRAM1L1Q8N609 369 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 ASB12Q8WXK4 309 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.7□□□□□ -0.06
CAPN3-207ENST00000397200 RILPQ96NA2 401 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 FAM126AQ9BYI3 521 aaPredicted RBP14.7□□□□□ -0.06
CAPN3-207ENST00000397200 PCED1AQ9H1Q7 454 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 ASB8Q9H765 288 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 CATSPERZQ9NTU4 200 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 INTS10Q9NVR2 710 aaKnown RBP14.7□□□□□ -0.06
CAPN3-207ENST00000397200 TAS2R1Q9NYW7 299 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 BAIAP2L1Q9UHR4 511 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.7□□□□□ -0.06
CAPN3-207ENST00000397200 VWA7Q9Y334 891 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 CEP192Q8TEP8 1941 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 MATN2O00339 956 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 GAPDHSO14556 408 aaPredicted RBP14.7□□□□□ -0.06
CAPN3-207ENST00000397200 SLC31A1O15431 190 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 CD3EAPO15446 510 aaKnown RBP14.7□□□□□ -0.06
CAPN3-207ENST00000397200 GSC2O15499 205 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 LATO43561 262 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 GPR37L1O60883 481 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 TIAL1Q01085 375 aaKnown RBP eCLIP14.7□□□□□ -0.06
CAPN3-207ENST00000397200 PRKAA1Q13131 559 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 NFATC2Q13469 925 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 RAET1GQ6H3X3 334 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 ZNF549Q6P9A3 640 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 TAS2R42Q7RTR8 314 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 PIWIL4Q7Z3Z4 852 aaKnown RBP14.7□□□□□ -0.06
CAPN3-207ENST00000397200 SNX20Q7Z614 316 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 NLRP8Q86W28 1048 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 DTX3LQ8TDB6 740 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 CCDC126Q96EE4 140 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 ILKAPQ9H0C8 392 aaPredicted RBP14.7□□□□□ -0.06
CAPN3-207ENST00000397200 C1orf21Q9H246 121 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 COG4Q9H9E3 785 aa14.7□□□□□ -0.06
CAPN3-207ENST00000397200 PRR5-ARHGAP8B1AHC4 643 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 C10orf142B7Z368 130 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 SLCO1B7G3V0H7 640 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 PCCBP05166 539 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 IGHV4-34P06331 123 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 PYGLP06737 847 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 CHRNGP07510 517 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 RBP1P09455 135 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 BCKDHBP21953 392 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 MPSTP25325 297 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 NUDT1P36639 197 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 GPR1P46091 355 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 ALDH18A1P54886 795 aaKnown RBP14.69□□□□□ -0.06
CAPN3-207ENST00000397200 CDKN2DP55273 166 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 ARHGAP8P85298 464 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 ACAP2Q15057 778 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 IRF4Q15306 451 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 WSCD2Q2TBF2 565 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 ZNF528Q3MIS6 628 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 GPR33Q49SQ1 333 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 ATP13A5Q4VNC0 1218 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 ARL13AQ5H913 290 aaPredicted RBP14.69□□□□□ -0.06
CAPN3-207ENST00000397200 AARS2Q5JTZ9 985 aaKnown RBP14.69□□□□□ -0.06
CAPN3-207ENST00000397200 METTL21CQ5VZV1 264 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 SDCCAG8Q86SQ7 713 aaPredicted RBP14.69□□□□□ -0.06
CAPN3-207ENST00000397200 TEX9Q8N6V9 391 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 TP53I13Q8NBR0 393 aaPredicted RBP14.69□□□□□ -0.06
CAPN3-207ENST00000397200 CADM4Q8NFZ8 388 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 MAPK15Q8TD08 544 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 SNX19Q92543 992 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 ULK4Q96C45 1275 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 BIRC7Q96CA5 298 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 LENG8Q96PV6 779 aaPredicted RBP14.69□□□□□ -0.06
CAPN3-207ENST00000397200 GPAMQ9HCL2 828 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 CRLS1Q9UJA2 301 aa14.69□□□□□ -0.06
CAPN3-207ENST00000397200 PLXNB3Q9ULL4 1909 aa14.68□□□□□ -0.06
CAPN3-207ENST00000397200 HDAC3O15379 428 aa14.68□□□□□ -0.06
CAPN3-207ENST00000397200 GYG2O15488 501 aa14.68□□□□□ -0.06
CAPN3-207ENST00000397200 GPR39O43194 453 aa14.68□□□□□ -0.06
CAPN3-207ENST00000397200 ENO1P06733 434 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms