RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 ZNF106Q9H2Y7 1883 aaKnown RBP14.31□□□□□ -0.12
SEC13-208ENST00000397109 LILRA5A6NI73 299 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 CFAP99D6REC4 459 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 H7C0S8 307 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 HGSO14964 777 aaPredicted RBP14.31□□□□□ -0.12
SEC13-208ENST00000397109 GPR39O43194 453 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 SUN1O94901 812 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 VIPP01282 170 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 TPH1P17752 444 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 HALP42357 657 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 ABCG1P45844 678 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 PPM1FP49593 454 aaPredicted RBP14.31□□□□□ -0.12
SEC13-208ENST00000397109 CTSCP53634 463 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 LIMK2P53671 638 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 UBE2IP63279 158 aaKnown RBP14.31□□□□□ -0.12
SEC13-208ENST00000397109 TMPRSS15P98073 1019 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 SEMA5AQ13591 1074 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 SEPT6Q14141 434 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 POU6F1Q14863 301 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 SKIDA1Q1XH10 827 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 TMEM71Q6P5X7 295 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 C19orf48Q6RUI8 117 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 TMPRSS9Q7Z410 1059 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 RBM12BQ8IXT5 1001 aaKnown RBP14.31□□□□□ -0.12
SEC13-208ENST00000397109 TAB3Q8N5C8 712 aaPredicted RBP14.31□□□□□ -0.12
SEC13-208ENST00000397109 DNAAF3Q8N9W5 541 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 RAB6BQ9NRW1 208 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 NLE1Q9NVX2 485 aaPredicted RBP14.31□□□□□ -0.12
SEC13-208ENST00000397109 LOXL2Q9Y4K0 774 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 PCDHGA7Q9Y5G6 932 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 AHCTF1Q8WYP5 2266 aa14.31□□□□□ -0.12
SEC13-208ENST00000397109 ADAMTS20P59510 1910 aa14.3□□□□□ -0.12
SEC13-208ENST00000397109 IGHV5-10-1A0A0J9YXX1 117 aa14.3□□□□□ -0.12
SEC13-208ENST00000397109 MYBL2P10244 700 aa14.3□□□□□ -0.12
SEC13-208ENST00000397109 PSMA3P25788 255 aa14.3□□□□□ -0.12
SEC13-208ENST00000397109 CA5AP35218 305 aa14.3□□□□□ -0.12
SEC13-208ENST00000397109 SLC19A1P41440 591 aa14.3□□□□□ -0.12
SEC13-208ENST00000397109 CARSP49589 748 aaKnown RBP14.3□□□□□ -0.12
SEC13-208ENST00000397109 HSP90B2PQ58FF3 399 aa14.3□□□□□ -0.12
SEC13-208ENST00000397109 NKAIN2Q5VXU1 208 aa14.3□□□□□ -0.12
SEC13-208ENST00000397109 DUPD1Q68J44 220 aa14.3□□□□□ -0.12
SEC13-208ENST00000397109 WDR74Q6RFH5 385 aaPredicted RBP14.3□□□□□ -0.12
SEC13-208ENST00000397109 PPP1R21Q6ZMI0 780 aa14.3□□□□□ -0.12
SEC13-208ENST00000397109 ZNF574Q6ZN55 896 aaPredicted RBP14.3□□□□□ -0.12
SEC13-208ENST00000397109 ZNF761Q86XN6 746 aaPredicted RBP14.3□□□□□ -0.12
SEC13-208ENST00000397109 NXPE1Q8N323 547 aa14.3□□□□□ -0.12
SEC13-208ENST00000397109 GLIS1Q8NBF1 620 aa14.3□□□□□ -0.12
SEC13-208ENST00000397109 DNAJC1Q96KC8 554 aaKnown RBP14.3□□□□□ -0.12
SEC13-208ENST00000397109 COPS8Q99627 209 aa14.3□□□□□ -0.12
SEC13-208ENST00000397109 DPH1Q9BZG8 443 aa14.3□□□□□ -0.12
SEC13-208ENST00000397109 ZMYND15Q9H091 742 aa14.3□□□□□ -0.12
SEC13-208ENST00000397109 POT1Q9NUX5 634 aa14.3□□□□□ -0.12
SEC13-208ENST00000397109 SCHIP1Q9P0W5 487 aaPredicted RBP14.3□□□□□ -0.12
SEC13-208ENST00000397109 LHX6Q9UPM6 363 aa14.3□□□□□ -0.12
SEC13-208ENST00000397109 CHD6Q8TD26 2715 aa14.3□□□□□ -0.12
SEC13-208ENST00000397109 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.29□□□□□ -0.12
SEC13-208ENST00000397109 MGAT4DA6NG13 374 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 MROH6A6NGR9 719 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 OR2AG2A6NM03 316 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 NDC80O14777 642 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 TTI1O43156 1089 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 HOXB3P14651 431 aaPredicted RBP14.29□□□□□ -0.12
SEC13-208ENST00000397109 RPL10P27635 214 aaKnown RBP14.29□□□□□ -0.12
SEC13-208ENST00000397109 MC4RP32245 332 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 PTGIRP43119 386 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 SEPT7Q16181 437 aaKnown RBP14.29□□□□□ -0.12
SEC13-208ENST00000397109 COL28A1Q2UY09 1125 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 BCL7AQ4VC05 210 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 FNBP1LQ5T0N5 605 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 TMEM26Q6ZUK4 368 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 GSTA5Q7RTV2 222 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 BEND7Q8N7W2 519 aaPredicted RBP14.29□□□□□ -0.12
SEC13-208ENST00000397109 OR52K1Q8NGK4 314 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 KCNE4Q8WWG9 221 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 IFT81Q8WYA0 676 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 NCSTNQ92542 709 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 CXorf40BQ96DE9 158 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 SGF29Q96ES7 293 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 CDKN2AIPNLQ96HQ2 116 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 LINC00615Q96LM1 132 aaPredicted RBP14.29□□□□□ -0.12
SEC13-208ENST00000397109 CCDC74BQ96LY2 380 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 B3GNT4Q9C0J1 378 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 TSPYL1Q9H0U9 437 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 ZDHHC3Q9NYG2 299 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 ZNF624Q9P2J8 865 aaPredicted RBP14.29□□□□□ -0.12
SEC13-208ENST00000397109 PDP2Q9P2J9 529 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 PISDQ9UG56 409 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 RIMKLBQ9ULI2 386 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 NFU1Q9UMS0 254 aa14.29□□□□□ -0.12
SEC13-208ENST00000397109 PTPRQQ9UMZ3 2332 aa14.28□□□□□ -0.12
SEC13-208ENST00000397109 TRBV5-4A0A0C4DH59 114 aa14.28□□□□□ -0.12
SEC13-208ENST00000397109 HEATR9A2RTY3 570 aa14.28□□□□□ -0.12
SEC13-208ENST00000397109 PMS2P1A4D2B8 440 aa14.28□□□□□ -0.12
SEC13-208ENST00000397109 NVLO15381 856 aaKnown RBP14.28□□□□□ -0.12
SEC13-208ENST00000397109 APRTP07741 180 aa14.28□□□□□ -0.12
SEC13-208ENST00000397109 THRAP10827 490 aa14.28□□□□□ -0.12
SEC13-208ENST00000397109 ATP1B2P14415 290 aaPredicted RBP14.28□□□□□ -0.12
SEC13-208ENST00000397109 ETS1P14921 441 aa14.28□□□□□ -0.12
SEC13-208ENST00000397109 BRAFP15056 766 aa14.28□□□□□ -0.12
SEC13-208ENST00000397109 CSF2RBP32927 897 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms