RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 CTSKP43235 329 aa17.24■□□□□ 0.35
MCF2L-208ENST00000397030 RPL6Q02878 288 aaKnown RBP17.24■□□□□ 0.35
MCF2L-208ENST00000397030 TIGD2Q4W5G0 525 aa17.24■□□□□ 0.35
MCF2L-208ENST00000397030 CTPS2Q9NRF8 586 aa17.24■□□□□ 0.35
MCF2L-208ENST00000397030 PCDHGA6Q9Y5G7 932 aa17.24■□□□□ 0.35
MCF2L-208ENST00000397030 ZC3H13Q5T200 1668 aaKnown RBP17.24■□□□□ 0.35
MCF2L-208ENST00000397030 FADS2O95864 444 aaKnown RBP17.24■□□□□ 0.35
MCF2L-208ENST00000397030 HEXBP07686 556 aa17.24■□□□□ 0.35
MCF2L-208ENST00000397030 IDO1P14902 403 aa17.24■□□□□ 0.35
MCF2L-208ENST00000397030 FMO1Q01740 532 aa17.24■□□□□ 0.35
MCF2L-208ENST00000397030 AUHQ13825 339 aaKnown RBP17.24■□□□□ 0.35
MCF2L-208ENST00000397030 LDLRAP1Q5SW96 308 aa17.24■□□□□ 0.35
MCF2L-208ENST00000397030 NT5DC1Q5TFE4 455 aa17.24■□□□□ 0.35
MCF2L-208ENST00000397030 CTU1Q7Z7A3 348 aaKnown RBP17.24■□□□□ 0.35
MCF2L-208ENST00000397030 CUZD1Q86UP6 607 aa17.24■□□□□ 0.35
MCF2L-208ENST00000397030 DQX1Q8TE96 717 aaKnown RBP17.24■□□□□ 0.35
MCF2L-208ENST00000397030 TRIM63Q969Q1 353 aa17.24■□□□□ 0.35
MCF2L-208ENST00000397030 PSMG2Q969U7 264 aa17.24■□□□□ 0.35
MCF2L-208ENST00000397030 EBF3Q9H4W6 596 aa17.24■□□□□ 0.35
MCF2L-208ENST00000397030 KDM4FA0A1W2PPD8 638 aa17.24■□□□□ 0.35
MCF2L-208ENST00000397030 NEMP2A6NFY4 417 aa17.24■□□□□ 0.35
MCF2L-208ENST00000397030 EOMESO95936 686 aa17.24■□□□□ 0.35
MCF2L-208ENST00000397030 PRLRP16471 622 aa17.24■□□□□ 0.35
MCF2L-208ENST00000397030 PRR5P85299 388 aa17.24■□□□□ 0.35
MCF2L-208ENST00000397030 MPP1Q00013 466 aa17.24■□□□□ 0.35
MCF2L-208ENST00000397030 HSF2Q03933 536 aa17.24■□□□□ 0.35
MCF2L-208ENST00000397030 GK5Q6ZS86 529 aa17.24■□□□□ 0.35
MCF2L-208ENST00000397030 PYROXD2Q8N2H3 581 aa17.24■□□□□ 0.35
MCF2L-208ENST00000397030 IPPKQ9H8X2 491 aa17.24■□□□□ 0.35
MCF2L-208ENST00000397030 SEC61A2Q9H9S3 476 aa17.24■□□□□ 0.35
MCF2L-208ENST00000397030 MIOSQ9NXC5 875 aa17.24■□□□□ 0.35
MCF2L-208ENST00000397030 H3BSH0 61 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 PEX14O75381 377 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 CHRNA1P02708 482 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 ECT2LQ008S8 904 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 CHIT1Q13231 466 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 ANKRD46Q86W74 232 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 SLC22A8Q8TCC7 542 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 GORASP1Q9BQQ3 440 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 CRNNQ9UBG3 495 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-208ENST00000397030 FTSJ1Q9UET6 329 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 FKBPLQ9UIM3 349 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 PLAGL1Q9UM63 463 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 TRIM64BA6NI03 449 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 UROSP10746 265 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 HSD3B2P26439 372 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 BTN3A2P78410 334 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 TAC4Q86UU9 113 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 WDR77Q9BQA1 342 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-208ENST00000397030 MFHAS1Q9Y4C4 1052 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 ARL5AQ9Y689 179 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 FRMPD1Q5SYB0 1578 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 EIF1AYO14602 144 aaKnown RBP17.23■□□□□ 0.35
MCF2L-208ENST00000397030 ATP5A1P25705 553 aaKnown RBP17.23■□□□□ 0.35
MCF2L-208ENST00000397030 HSD11B1P28845 292 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 ARRB1P49407 418 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-208ENST00000397030 ALDH3A2P51648 485 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 HBEGFQ99075 208 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 OR51V1Q9H2C8 321 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 ABCB9Q9NP78 766 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 BATF3Q9NR55 127 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 CDC40O60508 579 aaKnown RBP eCLIP17.23■□□□□ 0.35
MCF2L-208ENST00000397030 CPNE6O95741 557 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 NDST3O95803 873 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 SHBGP04278 402 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 IL7RP16871 459 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 NOMO3P69849 1222 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 COL9A2Q14055 689 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-208ENST00000397030 DNAJB7Q7Z6W7 309 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-208ENST00000397030 AMIGO2Q86SJ2 522 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 IKZF4Q9H2S9 585 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 B4GALT2O60909 372 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 TNFAIP8O95379 198 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 CXCR1P25024 350 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 HNRNPH1P31943 449 aaKnown RBP17.23■□□□□ 0.35
MCF2L-208ENST00000397030 RIPK1Q13546 671 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 TBATAQ96M53 351 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 ABCB10Q9NRK6 738 aa17.23■□□□□ 0.35
MCF2L-208ENST00000397030 SETBP1Q9Y6X0 1596 aa17.22■□□□□ 0.35
MCF2L-208ENST00000397030 KCNU1A8MYU2 1149 aa17.22■□□□□ 0.35
MCF2L-208ENST00000397030 BTN3A3O00478 584 aa17.22■□□□□ 0.35
MCF2L-208ENST00000397030 SLC34A1Q06495 639 aa17.22■□□□□ 0.35
MCF2L-208ENST00000397030 BMT2Q1RMZ1 405 aa17.22■□□□□ 0.35
MCF2L-208ENST00000397030 MBLAC2Q68D91 279 aa17.22■□□□□ 0.35
MCF2L-208ENST00000397030 NOXRED1Q6NXP6 359 aa17.22■□□□□ 0.35
MCF2L-208ENST00000397030 TMPRSS11AQ6ZMR5 421 aa17.22■□□□□ 0.35
MCF2L-208ENST00000397030 DHDDSQ86SQ9 333 aa17.22■□□□□ 0.35
MCF2L-208ENST00000397030 IQCHQ86VS3 1027 aa17.22■□□□□ 0.35
MCF2L-208ENST00000397030 XYLT1Q86Y38 959 aa17.22■□□□□ 0.35
MCF2L-208ENST00000397030 CELF5Q8N6W0 485 aaKnown RBP17.22■□□□□ 0.35
MCF2L-208ENST00000397030 STYXQ8WUJ0 223 aa17.22■□□□□ 0.35
MCF2L-208ENST00000397030 AZIN2Q96A70 460 aa17.22■□□□□ 0.35
MCF2L-208ENST00000397030 RCN3Q96D15 328 aa17.22■□□□□ 0.35
MCF2L-208ENST00000397030 C1GALT1C1Q96EU7 318 aa17.22■□□□□ 0.35
MCF2L-208ENST00000397030 ELOA3DA6NLF2 546 aaPredicted RBP17.22■□□□□ 0.35
MCF2L-208ENST00000397030 ZNF20P17024 532 aa17.22■□□□□ 0.35
MCF2L-208ENST00000397030 CCR10P46092 362 aa17.22■□□□□ 0.35
MCF2L-208ENST00000397030 ZMYND11Q15326 602 aa17.22■□□□□ 0.35
MCF2L-208ENST00000397030 ELOA3BQ3SY89 546 aa17.22■□□□□ 0.35
MCF2L-208ENST00000397030 CDKAL1Q5VV42 579 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms