RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 KDELR3O43731 214 aa15.45■□□□□ 0.06
GNE-202ENST00000396594 ERAL1O75616 437 aaKnown RBP15.45■□□□□ 0.06
GNE-202ENST00000396594 ADH5P11766 374 aa15.45■□□□□ 0.06
GNE-202ENST00000396594 ATP4BP51164 291 aa15.45■□□□□ 0.06
GNE-202ENST00000396594 CRADDP78560 199 aa15.45■□□□□ 0.06
GNE-202ENST00000396594 MCEMP1Q8IX19 187 aa15.45■□□□□ 0.06
GNE-202ENST00000396594 TRPV1Q8NER1 839 aa15.45■□□□□ 0.06
GNE-202ENST00000396594 CLPTM1LQ96KA5 538 aa15.45■□□□□ 0.06
GNE-202ENST00000396594 IL12RB2Q99665 862 aa15.45■□□□□ 0.06
GNE-202ENST00000396594 FAM83CQ9BQN1 747 aa15.45■□□□□ 0.06
GNE-202ENST00000396594 APOBEC3GQ9HC16 384 aaKnown RBP15.45■□□□□ 0.06
GNE-202ENST00000396594 VEGFDO43915 354 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 VNN1O95497 513 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 TCF4P15884 667 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 GSTM3P21266 225 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 AP3S2P59780 193 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 VN1R5Q7Z5H4 357 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 DBF4BQ8NFT6 615 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 C9orf43Q8TAL5 461 aaPredicted RBP15.44■□□□□ 0.06
GNE-202ENST00000396594 IPCEF1Q8WWN9 437 aaPredicted RBP15.44■□□□□ 0.06
GNE-202ENST00000396594 ACOT12Q8WYK0 555 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 HAVCR1Q96D42 359 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 C6orf62Q9GZU0 229 aaPredicted RBP15.44■□□□□ 0.06
GNE-202ENST00000396594 COMMD9Q9P000 198 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 ZNF623O75123 536 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 TRIM3O75382 744 aaPredicted RBP15.44■□□□□ 0.06
GNE-202ENST00000396594 GSRP00390 522 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 C2orf80Q0P641 193 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 ZNF563Q8TA94 476 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 DNAJB14Q8TBM8 379 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 CENPNQ96H22 339 aaPredicted RBP15.44■□□□□ 0.06
GNE-202ENST00000396594 VIRMAQ69YN4 1812 aaKnown RBP15.44■□□□□ 0.06
GNE-202ENST00000396594 SHOX2O60902 331 aaPredicted RBP15.44■□□□□ 0.06
GNE-202ENST00000396594 REM1O75628 298 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 SERPINA3P01011 423 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 IMPDH1P20839 514 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 CDH3P22223 829 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 NR4A1P22736 598 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 IDH2P48735 452 aaKnown RBP15.44■□□□□ 0.06
GNE-202ENST00000396594 SLC7A2P52569 658 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 UBXN11Q5T124 520 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 PPP2R2DQ66LE6 453 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 SLC9A4Q6AI14 798 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 PTCHD4Q6ZW05 846 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 KRT77Q7Z794 578 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 UBR7Q8N806 425 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.44■□□□□ 0.06
GNE-202ENST00000396594 BTRCQ9Y297 605 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 PDPK1O15530 556 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 TNFP01375 233 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 ERVK-8P63133 956 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 ZNF155Q12901 538 aaPredicted RBP15.44■□□□□ 0.06
GNE-202ENST00000396594 VITQ6UXI7 678 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 TAF8Q7Z7C8 310 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 ZNF527Q8NB42 609 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 TSGA13Q96PP4 275 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 SRMSQ9H3Y6 488 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 KLHL31Q9H511 634 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 DTLQ9NZJ0 730 aa15.44■□□□□ 0.06
GNE-202ENST00000396594 TMEM150CB9EJG8 249 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 PRKAR1AP10644 381 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 CD247P20963 164 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 HKDC1Q2TB90 917 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 DCST1Q5T197 706 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 SDHAF4Q5VUM1 108 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 GPR156Q8NFN8 814 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 ZBTB10Q96DT7 871 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 S100A14Q9HCY8 104 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 HAT1O14929 419 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 NTRK1P04629 796 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 HERVK_113P63132 956 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 GALNT2Q10471 571 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 NAE1Q13564 534 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 NPY5RQ15761 445 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 IFI44LQ53G44 452 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 OR2AP1Q8NGE2 309 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 OR10G6Q8NH81 332 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 PCDH19Q8TAB3 1148 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 GPATCH1Q9BRR8 931 aaKnown RBP15.43■□□□□ 0.06
GNE-202ENST00000396594 ERVK-6Q9BXR3 956 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 ZCWPW1Q9H0M4 648 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 WDR26Q9H7D7 661 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 SDHAF3Q9NRP4 125 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 MKS1Q9NXB0 559 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 CASRP41180 1078 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 ERFP50548 548 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 GLYATQ6IB77 296 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 ARHGAP36Q6ZRI8 547 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 THAP5Q7Z6K1 395 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 CMTM7Q96FZ5 175 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 NECTIN4Q96NY8 510 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 GMLQ99445 158 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 UNKQ9C0B0 810 aaKnown RBP15.43■□□□□ 0.06
GNE-202ENST00000396594 ACP6Q9NPH0 428 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 MOCS1Q9NZB8 636 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 WBP11Q9Y2W2 641 aaKnown RBP15.43■□□□□ 0.06
GNE-202ENST00000396594 SPIN1Q9Y657 262 aaPredicted RBP15.43■□□□□ 0.06
GNE-202ENST00000396594 MYBPHLA2RUH7 354 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 STX16-NPEPL1H3BU86 382 aa15.43■□□□□ 0.06
GNE-202ENST00000396594 STX16O14662 325 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms