RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 OR51F1A6NGY5 319 aa30.11■■■□□ 2.41
CMTM4-202ENST00000394106 C9orf172C9J069 976 aa30.11■■■□□ 2.41
CMTM4-202ENST00000394106 POLBP06746 335 aa30.11■■■□□ 2.41
CMTM4-202ENST00000394106 LAMB3Q13751 1172 aa30.11■■■□□ 2.41
CMTM4-202ENST00000394106 TMEM164Q5U3C3 297 aa30.11■■■□□ 2.41
CMTM4-202ENST00000394106 C4orf22Q6V702 233 aa30.11■■■□□ 2.41
CMTM4-202ENST00000394106 PLXDC1Q8IUK5 500 aa30.11■■■□□ 2.41
CMTM4-202ENST00000394106 PIANPQ8IYJ0 282 aa30.11■■■□□ 2.41
CMTM4-202ENST00000394106 CFAP206Q8IYR0 622 aa30.11■■■□□ 2.41
CMTM4-202ENST00000394106 SLC35F6Q8N357 371 aa30.11■■■□□ 2.41
CMTM4-202ENST00000394106 GPR150Q8NGU9 434 aa30.11■■■□□ 2.41
CMTM4-202ENST00000394106 MS4A14Q96JA4 679 aa30.11■■■□□ 2.41
CMTM4-202ENST00000394106 PBKQ96KB5 322 aa30.11■■■□□ 2.41
CMTM4-202ENST00000394106 LINC00615Q96LM1 132 aaPredicted RBP30.11■■■□□ 2.41
CMTM4-202ENST00000394106 IMP3Q9NV31 184 aaKnown RBP30.11■■■□□ 2.41
CMTM4-202ENST00000394106 OCIAD1Q9NX40 245 aa30.11■■■□□ 2.41
CMTM4-202ENST00000394106 TRMT1Q9NXH9 659 aaKnown RBP30.11■■■□□ 2.41
CMTM4-202ENST00000394106 SLC2A6Q9UGQ3 507 aa30.11■■■□□ 2.41
CMTM4-202ENST00000394106 IGLV3-16A0A075B6K0 115 aa30.1■■■□□ 2.41
CMTM4-202ENST00000394106 CCDC162PA2VCL2 907 aa30.1■■■□□ 2.41
CMTM4-202ENST00000394106 KLHL33A6NCF5 533 aa30.1■■■□□ 2.41
CMTM4-202ENST00000394106 EFCAB7A8K855 629 aa30.1■■■□□ 2.41
CMTM4-202ENST00000394106 ADRA1DP25100 572 aa30.1■■■□□ 2.41
CMTM4-202ENST00000394106 GFERP55789 205 aa30.1■■■□□ 2.41
CMTM4-202ENST00000394106 CXADRP78310 365 aa30.1■■■□□ 2.41
CMTM4-202ENST00000394106 CLN3Q13286 438 aa30.1■■■□□ 2.41
CMTM4-202ENST00000394106 DBN1Q16643 649 aa30.1■■■□□ 2.41
CMTM4-202ENST00000394106 TSTD2Q5T7W7 516 aa30.1■■■□□ 2.41
CMTM4-202ENST00000394106 FCRL3Q96P31 734 aaPredicted RBP30.1■■■□□ 2.41
CMTM4-202ENST00000394106 RANBP9Q96S59 729 aa30.1■■■□□ 2.41
CMTM4-202ENST00000394106 EIF2B3Q9NR50 452 aaKnown RBP30.1■■■□□ 2.41
CMTM4-202ENST00000394106 ACSL5Q9ULC5 683 aa30.1■■■□□ 2.41
CMTM4-202ENST00000394106 SLC35G4P0C7Q5 338 aa30.09■■■□□ 2.41
CMTM4-202ENST00000394106 MTHFD1P11586 935 aaKnown RBP30.09■■■□□ 2.41
CMTM4-202ENST00000394106 PSMA3P25788 255 aa30.09■■■□□ 2.41
CMTM4-202ENST00000394106 TRIP13Q15645 432 aaPredicted RBP30.09■■■□□ 2.41
CMTM4-202ENST00000394106 ARHGAP22Q7Z5H3 698 aa30.09■■■□□ 2.41
CMTM4-202ENST00000394106 RASGEF1CQ8N431 466 aa30.09■■■□□ 2.41
CMTM4-202ENST00000394106 LILRA3Q8N6C8 439 aaPredicted RBP30.09■■■□□ 2.41
CMTM4-202ENST00000394106 OR13J1Q8NGT2 312 aa30.09■■■□□ 2.41
CMTM4-202ENST00000394106 HM13Q8TCT9 377 aa30.09■■■□□ 2.41
CMTM4-202ENST00000394106 JPH3Q8WXH2 748 aaPredicted RBP30.09■■■□□ 2.41
CMTM4-202ENST00000394106 ART4Q93070 314 aa30.09■■■□□ 2.41
CMTM4-202ENST00000394106 HDAC10Q969S8 669 aa30.09■■■□□ 2.41
CMTM4-202ENST00000394106 C12orf66Q96MD2 445 aa30.09■■■□□ 2.41
CMTM4-202ENST00000394106 TGM7Q96PF1 710 aa30.09■■■□□ 2.41
CMTM4-202ENST00000394106 TAAR9Q96RI9 348 aa30.09■■■□□ 2.41
CMTM4-202ENST00000394106 INSM2Q96T92 566 aaPredicted RBP30.09■■■□□ 2.41
CMTM4-202ENST00000394106 PRORYQ9H606 182 aa30.09■■■□□ 2.41
CMTM4-202ENST00000394106 SMARCAL1Q9NZC9 954 aa30.09■■■□□ 2.41
CMTM4-202ENST00000394106 MN1Q10571 1320 aaPredicted RBP30.08■■■□□ 2.41
CMTM4-202ENST00000394106 SESN2P58004 480 aaPredicted RBP30.08■■■□□ 2.41
CMTM4-202ENST00000394106 DUS1LQ6P1R4 473 aaKnown RBP30.08■■■□□ 2.41
CMTM4-202ENST00000394106 XKR5Q6UX68 686 aa30.08■■■□□ 2.41
CMTM4-202ENST00000394106 ZFAND4Q86XD8 727 aa30.08■■■□□ 2.41
CMTM4-202ENST00000394106 CLDN19Q8N6F1 224 aa30.08■■■□□ 2.41
CMTM4-202ENST00000394106 PPHLN1Q8NEY8 458 aaKnown RBP30.08■■■□□ 2.41
CMTM4-202ENST00000394106 SPDYE1Q8NFV5 336 aaPredicted RBP30.08■■■□□ 2.41
CMTM4-202ENST00000394106 RSC1A1Q92681 617 aa30.08■■■□□ 2.41
CMTM4-202ENST00000394106 PMEPA1Q969W9 287 aa30.08■■■□□ 2.41
CMTM4-202ENST00000394106 ZNF778Q96MU6 729 aa30.08■■■□□ 2.41
CMTM4-202ENST00000394106 AP1M1Q9BXS5 423 aa30.08■■■□□ 2.41
CMTM4-202ENST00000394106 CPNE5Q9HCH3 593 aa30.08■■■□□ 2.41
CMTM4-202ENST00000394106 SLC39A1Q9NY26 324 aa30.08■■■□□ 2.41
CMTM4-202ENST00000394106 ACSL6Q9UKU0 697 aa30.08■■■□□ 2.41
CMTM4-202ENST00000394106 TCAF1Q9Y4C2 921 aa30.08■■■□□ 2.41
CMTM4-202ENST00000394106 FAM208BQ5VWN6 2430 aa30.07■■■□□ 2.4
CMTM4-202ENST00000394106 FOXN2P32314 431 aa30.07■■■□□ 2.4
CMTM4-202ENST00000394106 TERF1P54274 439 aa30.07■■■□□ 2.4
CMTM4-202ENST00000394106 UCNP55089 124 aa30.07■■■□□ 2.4
CMTM4-202ENST00000394106 TMPRSS3P57727 454 aa30.07■■■□□ 2.4
CMTM4-202ENST00000394106 TGIF1Q15583 401 aa30.07■■■□□ 2.4
CMTM4-202ENST00000394106 TBRG4Q969Z0 631 aaKnown RBP eCLIP30.07■■■□□ 2.4
CMTM4-202ENST00000394106 CCM2Q9BSQ5 444 aa30.07■■■□□ 2.4
CMTM4-202ENST00000394106 VPS37BQ9H9H4 285 aa30.07■■■□□ 2.4
CMTM4-202ENST00000394106 TTC7AQ9ULT0 858 aaPredicted RBP30.07■■■□□ 2.4
CMTM4-202ENST00000394106 NBEAQ8NFP9 2946 aa30.06■■■□□ 2.4
CMTM4-202ENST00000394106 CAPN5O15484 640 aaPredicted RBP30.06■■■□□ 2.4
CMTM4-202ENST00000394106 KIF5CO60282 957 aa30.06■■■□□ 2.4
CMTM4-202ENST00000394106 GOT2P00505 430 aaKnown RBP30.06■■■□□ 2.4
CMTM4-202ENST00000394106 CAPZBP47756 277 aa30.06■■■□□ 2.4
CMTM4-202ENST00000394106 LEPRP48357 1165 aaKnown RBP30.06■■■□□ 2.4
CMTM4-202ENST00000394106 VPS41P49754 854 aa30.06■■■□□ 2.4
CMTM4-202ENST00000394106 GSE1Q14687 1217 aa30.06■■■□□ 2.4
CMTM4-202ENST00000394106 PLCL1Q15111 1095 aa30.06■■■□□ 2.4
CMTM4-202ENST00000394106 AFTPHQ6ULP2 937 aa30.06■■■□□ 2.4
CMTM4-202ENST00000394106 NLRP9Q7RTR0 991 aa30.06■■■□□ 2.4
CMTM4-202ENST00000394106 OR6P1Q8NGX9 317 aa30.06■■■□□ 2.4
CMTM4-202ENST00000394106 MAGOHBQ96A72 148 aaKnown RBP30.06■■■□□ 2.4
CMTM4-202ENST00000394106 C9orf72Q96LT7 481 aa30.06■■■□□ 2.4
CMTM4-202ENST00000394106 RMDN2Q96LZ7 410 aa30.06■■■□□ 2.4
CMTM4-202ENST00000394106 RIMKLBQ9ULI2 386 aa30.06■■■□□ 2.4
CMTM4-202ENST00000394106 C9P02748 559 aa30.05■■■□□ 2.4
CMTM4-202ENST00000394106 LIPCP11150 499 aa30.05■■■□□ 2.4
CMTM4-202ENST00000394106 TTC27Q6P3X3 843 aa30.05■■■□□ 2.4
CMTM4-202ENST00000394106 B3GNT4Q9C0J1 378 aa30.05■■■□□ 2.4
CMTM4-202ENST00000394106 COG4Q9H9E3 785 aa30.05■■■□□ 2.4
CMTM4-202ENST00000394106 ZFYVE26Q68DK2 2539 aa30.05■■■□□ 2.4
CMTM4-202ENST00000394106 C17orf113A0A1B0GUU1 675 aa30.04■■■□□ 2.4
CMTM4-202ENST00000394106 B4E171 279 aa30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms