RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 WDR74Q6RFH5 385 aaPredicted RBP18.36■□□□□ 0.53
SNCB-202ENST00000393693 ARHGEF18Q6ZSZ5 1173 aa18.36■□□□□ 0.53
SNCB-202ENST00000393693 HOOK3Q86VS8 718 aa18.36■□□□□ 0.53
SNCB-202ENST00000393693 PPIL6Q8IXY8 311 aa18.36■□□□□ 0.53
SNCB-202ENST00000393693 MREGQ8N565 214 aa18.36■□□□□ 0.53
SNCB-202ENST00000393693 GLIS1Q8NBF1 620 aa18.36■□□□□ 0.53
SNCB-202ENST00000393693 LPCAT1Q8NF37 534 aa18.36■□□□□ 0.53
SNCB-202ENST00000393693 ARRDC2Q8TBH0 407 aa18.36■□□□□ 0.53
SNCB-202ENST00000393693 CATSPER2Q96P56 530 aa18.36■□□□□ 0.53
SNCB-202ENST00000393693 TEFMQ96QE5 360 aaKnown RBP18.36■□□□□ 0.53
SNCB-202ENST00000393693 TBC1D10AQ9BXI6 508 aa18.36■□□□□ 0.53
SNCB-202ENST00000393693 TDRD1Q9BXT4 1180 aaKnown RBP18.36■□□□□ 0.53
SNCB-202ENST00000393693 VIPAS39Q9H9C1 493 aa18.36■□□□□ 0.53
SNCB-202ENST00000393693 SARS2Q9NP81 518 aaKnown RBP18.36■□□□□ 0.53
SNCB-202ENST00000393693 RBM22Q9NW64 420 aaKnown RBP eCLIP18.36■□□□□ 0.53
SNCB-202ENST00000393693 TUBD1Q9UJT1 453 aa18.36■□□□□ 0.53
SNCB-202ENST00000393693 SHOC2Q9UQ13 582 aa18.36■□□□□ 0.53
SNCB-202ENST00000393693 TTLL3Q9Y4R7 772 aa18.36■□□□□ 0.53
SNCB-202ENST00000393693 A6NCN8 305 aa18.35■□□□□ 0.53
SNCB-202ENST00000393693 FADS2P1A8MWK0 482 aa18.35■□□□□ 0.53
SNCB-202ENST00000393693 PYGLP06737 847 aa18.35■□□□□ 0.53
SNCB-202ENST00000393693 FAM153BP0C7A2 387 aa18.35■□□□□ 0.53
SNCB-202ENST00000393693 OAS2P29728 719 aaKnown RBP18.35■□□□□ 0.53
SNCB-202ENST00000393693 GARSP41250 739 aaKnown RBP18.35■□□□□ 0.53
SNCB-202ENST00000393693 CDC20Q12834 499 aa18.35■□□□□ 0.53
SNCB-202ENST00000393693 FAM153CQ494X1 144 aa18.35■□□□□ 0.53
SNCB-202ENST00000393693 FAM182AQ5T1J6 154 aa18.35■□□□□ 0.53
SNCB-202ENST00000393693 TIGD7Q6NT04 549 aaPredicted RBP18.35■□□□□ 0.53
SNCB-202ENST00000393693 CEACAM20Q6UY09 585 aa18.35■□□□□ 0.53
SNCB-202ENST00000393693 PPP1R21Q6ZMI0 780 aa18.35■□□□□ 0.53
SNCB-202ENST00000393693 CCDC13Q8IYE1 715 aa18.35■□□□□ 0.53
SNCB-202ENST00000393693 MAML1Q92585 1016 aa18.35■□□□□ 0.53
SNCB-202ENST00000393693 KIAA1143Q96AT1 154 aaPredicted RBP18.35■□□□□ 0.53
SNCB-202ENST00000393693 VAT1Q99536 393 aa18.35■□□□□ 0.53
SNCB-202ENST00000393693 FUT8Q9BYC5 575 aa18.35■□□□□ 0.53
SNCB-202ENST00000393693 FBXO8Q9NRD0 319 aa18.35■□□□□ 0.53
SNCB-202ENST00000393693 VPS18Q9P253 973 aa18.35■□□□□ 0.53
SNCB-202ENST00000393693 FAM153AQ9UHL3 310 aa18.35■□□□□ 0.53
SNCB-202ENST00000393693 PTPN13Q12923 2485 aa18.35■□□□□ 0.53
SNCB-202ENST00000393693 MATN3O15232 486 aa18.34■□□□□ 0.53
SNCB-202ENST00000393693 CAPN5O15484 640 aaPredicted RBP18.34■□□□□ 0.53
SNCB-202ENST00000393693 STK17BO94768 372 aa18.34■□□□□ 0.53
SNCB-202ENST00000393693 CCNCP24863 283 aa18.34■□□□□ 0.53
SNCB-202ENST00000393693 FDFT1P37268 417 aa18.34■□□□□ 0.53
SNCB-202ENST00000393693 BASP1P80723 227 aaKnown RBP18.34■□□□□ 0.53
SNCB-202ENST00000393693 DHX9Q08211 1270 aaKnown RBP18.34■□□□□ 0.53
SNCB-202ENST00000393693 GPS2Q13227 327 aa18.34■□□□□ 0.53
SNCB-202ENST00000393693 DEFB109BQ30KR1 87 aa18.34■□□□□ 0.53
SNCB-202ENST00000393693 ZNF648Q5T619 568 aaPredicted RBP18.34■□□□□ 0.53
SNCB-202ENST00000393693 ALG1LQ6GMV1 187 aa18.34■□□□□ 0.53
SNCB-202ENST00000393693 C16orf46Q6P387 395 aa18.34■□□□□ 0.53
SNCB-202ENST00000393693 B4GALNT4Q76KP1 1039 aa18.34■□□□□ 0.53
SNCB-202ENST00000393693 KDELC2Q7Z4H8 507 aa18.34■□□□□ 0.53
SNCB-202ENST00000393693 PRUNE1Q86TP1 453 aa18.34■□□□□ 0.53
SNCB-202ENST00000393693 C9orf43Q8TAL5 461 aaPredicted RBP18.34■□□□□ 0.53
SNCB-202ENST00000393693 SPATA13Q96N96 652 aa18.34■□□□□ 0.53
SNCB-202ENST00000393693 TSGA13Q96PP4 275 aa18.34■□□□□ 0.53
SNCB-202ENST00000393693 PRDM8Q9NQV8 689 aa18.34■□□□□ 0.53
SNCB-202ENST00000393693 ANKMY1Q9P2S6 941 aa18.34■□□□□ 0.53
SNCB-202ENST00000393693 TRHDEQ9UKU6 1024 aa18.34■□□□□ 0.53
SNCB-202ENST00000393693 TMEM184BQ9Y519 407 aaPredicted RBP18.34■□□□□ 0.53
SNCB-202ENST00000393693 MRPS18BQ9Y676 258 aaKnown RBP18.34■□□□□ 0.53
SNCB-202ENST00000393693 C1orf232A0A0U1RR37 186 aa18.33■□□□□ 0.52
SNCB-202ENST00000393693 HLA-DQB2P05538 268 aa18.33■□□□□ 0.52
SNCB-202ENST00000393693 CASRP41180 1078 aa18.33■□□□□ 0.52
SNCB-202ENST00000393693 SPINT3P49223 89 aa18.33■□□□□ 0.52
SNCB-202ENST00000393693 FOXK1P85037 733 aa18.33■□□□□ 0.52
SNCB-202ENST00000393693 ABHD18Q0P651 414 aa18.33■□□□□ 0.52
SNCB-202ENST00000393693 ANKRD20A2Q5SQ80 823 aa18.33■□□□□ 0.52
SNCB-202ENST00000393693 HENMT1Q5T8I9 393 aaKnown RBP18.33■□□□□ 0.52
SNCB-202ENST00000393693 RNASEH2BQ5TBB1 312 aaKnown RBP18.33■□□□□ 0.52
SNCB-202ENST00000393693 ANKRD20A1Q5TYW2 823 aa18.33■□□□□ 0.52
SNCB-202ENST00000393693 ANKRD20A3Q5VUR7 823 aa18.33■□□□□ 0.52
SNCB-202ENST00000393693 ITPRIPL1Q6GPH6 555 aa18.33■□□□□ 0.52
SNCB-202ENST00000393693 LYSMD3Q7Z3D4 306 aa18.33■□□□□ 0.52
SNCB-202ENST00000393693 SLC9B2Q86UD5 537 aa18.33■□□□□ 0.52
SNCB-202ENST00000393693 SH3KBP1Q96B97 665 aa18.33■□□□□ 0.52
SNCB-202ENST00000393693 ABHD17AQ96GS6 310 aa18.33■□□□□ 0.52
SNCB-202ENST00000393693 FAM83DQ9H4H8 585 aa18.33■□□□□ 0.52
SNCB-202ENST00000393693 STN1Q9H668 368 aaKnown RBP18.33■□□□□ 0.52
SNCB-202ENST00000393693 RAB6BQ9NRW1 208 aa18.33■□□□□ 0.52
SNCB-202ENST00000393693 ZNF446Q9NWS9 450 aa18.33■□□□□ 0.52
SNCB-202ENST00000393693 FLNCQ14315 2725 aa18.33■□□□□ 0.52
SNCB-202ENST00000393693 RELNP78509 3460 aa18.33■□□□□ 0.52
SNCB-202ENST00000393693 MAP2K7O14733 419 aa18.32■□□□□ 0.52
SNCB-202ENST00000393693 POLR1CO15160 346 aaPredicted RBP18.32■□□□□ 0.52
SNCB-202ENST00000393693 DLGAP3O95886 979 aa18.32■□□□□ 0.52
SNCB-202ENST00000393693 F3P13726 295 aa18.32■□□□□ 0.52
SNCB-202ENST00000393693 F8A1P23610 371 aa18.32■□□□□ 0.52
SNCB-202ENST00000393693 GFERP55789 205 aa18.32■□□□□ 0.52
SNCB-202ENST00000393693 UBAP2LQ14157 1087 aaKnown RBP18.32■□□□□ 0.52
SNCB-202ENST00000393693 QPCTQ16769 361 aa18.32■□□□□ 0.52
SNCB-202ENST00000393693 KCTD19Q17RG1 926 aaPredicted RBP18.32■□□□□ 0.52
SNCB-202ENST00000393693 ALS2CLQ60I27 953 aa18.32■□□□□ 0.52
SNCB-202ENST00000393693 TMC3Q7Z5M5 1100 aa18.32■□□□□ 0.52
SNCB-202ENST00000393693 CCDC110Q8TBZ0 833 aa18.32■□□□□ 0.52
SNCB-202ENST00000393693 STARD8Q92502 1023 aa18.32■□□□□ 0.52
SNCB-202ENST00000393693 LYSMD1Q96S90 227 aa18.32■□□□□ 0.52
SNCB-202ENST00000393693 ZPBPQ9BS86 351 aa18.32■□□□□ 0.52
SNCB-202ENST00000393693 PHACTR1Q9C0D0 580 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 502.8 ms