RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 NCF2P19878 526 aaPredicted RBP8.5□□□□□ -1.05
TDP1-203ENST00000393454 COL9A1P20849 921 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 TARSP26639 723 aaKnown RBP8.5□□□□□ -1.05
TDP1-203ENST00000393454 PBLDP30039 288 aaPredicted RBP8.5□□□□□ -1.05
TDP1-203ENST00000393454 HK2P52789 917 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 COPAP53621 1224 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 CORO7P57737 925 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 MLLT1Q03111 559 aaPredicted RBP8.5□□□□□ -1.05
TDP1-203ENST00000393454 BNIP1Q12981 228 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 SYTL3Q4VX76 610 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 PLEKHS1Q5SXH7 462 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 NXNQ6DKJ4 435 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 SBSNQ6UWP8 590 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 TMPRSS6Q8IU80 811 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 MAPK15Q8TD08 544 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 KCNV2Q8TDN2 545 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 HLA-CQ95604 372 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 FAR2Q96K12 515 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 NSUN5Q96P11 429 aaKnown RBP8.5□□□□□ -1.05
TDP1-203ENST00000393454 GABRG3Q99928 467 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 ZCCHC2Q9C0B9 1178 aaKnown RBP8.5□□□□□ -1.05
TDP1-203ENST00000393454 NMUR2Q9GZQ4 415 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 MKRN2Q9H000 416 aaKnown RBP8.5□□□□□ -1.05
TDP1-203ENST00000393454 OR2AG1Q9H205 316 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 SEMA4BQ9NPR2 832 aaPredicted RBP8.5□□□□□ -1.05
TDP1-203ENST00000393454 TXLNGQ9NUQ3 528 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 ARMCX1Q9P291 453 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 KLHL42Q9P2K6 505 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 HAO1Q9UJM8 370 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 CNOT6Q9ULM6 557 aaKnown RBP8.5□□□□□ -1.05
TDP1-203ENST00000393454 TRPM6Q9BX84 2022 aa8.5□□□□□ -1.05
TDP1-203ENST00000393454 PABPN1LA6NDY0 278 aaKnown RBP8.49□□□□□ -1.05
TDP1-203ENST00000393454 STX16-NPEPL1H3BU86 382 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 UBFD1O14562 309 aaKnown RBP8.49□□□□□ -1.05
TDP1-203ENST00000393454 STX16O14662 325 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 FFAR2O15552 330 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 AP1G1O43747 822 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 SKAP2O75563 359 aaPredicted RBP8.49□□□□□ -1.05
TDP1-203ENST00000393454 CRCPO75575 148 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 CDK14O94921 469 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 ENO3P13929 434 aaPredicted RBP8.49□□□□□ -1.05
TDP1-203ENST00000393454 CD72P21854 359 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 CTSCP53634 463 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 TAS2R38P59533 333 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 MRPS21P82921 87 aaKnown RBP8.49□□□□□ -1.05
TDP1-203ENST00000393454 CLCQ05315 142 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 DPTQ07507 201 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 GTF2H3Q13889 308 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 RBBP7Q16576 425 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 C18orf21Q32NC0 220 aaPredicted RBP8.49□□□□□ -1.05
TDP1-203ENST00000393454 CYHR1Q6ZMK1 362 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 ACAD11Q709F0 780 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 Q7L0L9 218 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 OR14C36Q8NHC7 312 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 RPLP0P6Q8NHW5 317 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 ASZ1Q8WWH4 475 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 KLK6Q92876 244 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 ASB2Q96Q27 587 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 HGH1Q9BTY7 390 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 WDR55Q9H6Y2 383 aaPredicted RBP8.49□□□□□ -1.05
TDP1-203ENST00000393454 MID1IP1Q9NPA3 183 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 EIF2B4Q9UI10 523 aaKnown RBP8.49□□□□□ -1.05
TDP1-203ENST00000393454 SLC12A4Q9UP95 1085 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 CDYLQ9Y232 598 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 TRAF6Q9Y4K3 522 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 OARD1Q9Y530 152 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 A0A1W2PQF6 199 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 TRPC5OSA6NMA1 111 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 E9PBE3 544 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 PPP6CO00743 305 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 SGTAO43765 313 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 KLK8O60259 260 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 KLHL41O60662 606 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 ATP5HO75947 161 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 CBX6O95503 412 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 SOD1P00441 154 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 SERPINA6P08185 405 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 ACADMP11310 421 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 FOSL2P15408 326 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 VCLP18206 1134 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 EPHA3P29320 983 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 ARL1P40616 181 aaPredicted RBP8.49□□□□□ -1.05
TDP1-203ENST00000393454 CREB5Q02930 508 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 ACTN3Q08043 901 aaPredicted RBP8.49□□□□□ -1.05
TDP1-203ENST00000393454 GALNT1Q10472 559 aaPredicted RBP8.49□□□□□ -1.05
TDP1-203ENST00000393454 SGCGQ13326 291 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 TUBB3Q13509 450 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 UBAP2LQ14157 1087 aaKnown RBP8.49□□□□□ -1.05
TDP1-203ENST00000393454 PHKG1Q16816 387 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 TTC31Q49AM3 519 aaPredicted RBP8.49□□□□□ -1.05
TDP1-203ENST00000393454 CLEC6AQ6EIG7 209 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 DOK6Q6PKX4 331 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 UBE2R2Q712K3 238 aaPredicted RBP8.49□□□□□ -1.05
TDP1-203ENST00000393454 FAM124AQ86V42 546 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 TRAPPC5Q8IUR0 188 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 VRK3Q8IV63 474 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 PLA2G15Q8NCC3 412 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 CFAP61Q8NHU2 1237 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 FAM3CQ92520 227 aa8.49□□□□□ -1.05
TDP1-203ENST00000393454 TMEM159Q96B96 161 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms