RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 GCNT3O95395 438 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 IGKV3-11P04433 115 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 CKMT2P17540 419 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 HOXC9P31274 260 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 ACTR2P61160 394 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 LGALS3BPQ08380 585 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 CDC16Q13042 620 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 COL28A1Q2UY09 1125 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 DCAF10Q5QP82 559 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 C6orf141Q5SZD1 244 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 XRRA1Q6P2D8 792 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 CCBE1Q6UXH8 406 aaPredicted RBP0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 SLC25A42Q86VD7 318 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 C2CD5Q86YS7 1000 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 PM20D2Q8IYS1 436 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 CACNA2D3Q8IZS8 1091 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 NGEFQ8N5V2 710 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 SLC5A8Q8N695 610 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 KCNG4Q8TDN1 519 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 SMPDL3BQ92485 455 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 RUBCNQ92622 972 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 DYRK2Q92630 601 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 IGSF8Q969P0 613 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 ARSGQ96EG1 525 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 SLC45A3Q96JT2 553 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 TNIP3Q96KP6 325 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 LBHD1Q9BQE6 289 aaPredicted RBP0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 WDR12Q9GZL7 423 aaKnown RBP0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 ZNF700Q9H0M5 742 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 LAS1LQ9Y4W2 734 aaKnown RBP0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 HIVEP2P31629 2446 aa0.98□□□□□ -2.25
RNU6-239P-201ENST00000390990 SHISA7A6NL88 538 aa0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 C15orf61A6NNL5 157 aa0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 SHISA9B4DS77 424 aa0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 B9A039 149 aa0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 KLF11O14901 512 aa0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 PHF1O43189 567 aaPredicted RBP0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 IRF1P10914 325 aa0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 PRKACGP22612 351 aa0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 PIK3CAP42336 1068 aa0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 NEK3P51956 506 aa0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 TMEM50BP56557 158 aa0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 CD81P60033 236 aa0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 C2orf83Q53S99 150 aa0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 NSUN5P2Q63ZY6 315 aa0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 DENND5BQ6ZUT9 1274 aa0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 CD177Q8N6Q3 437 aa0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 TNIP2Q8NFZ5 429 aa0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 LRRC15Q8TF66 581 aa0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 CHPT1Q8WUD6 406 aa0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 SDHCQ99643 169 aaPredicted RBP0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 TMEM47Q9BQJ4 181 aa0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 H2AFJQ9BTM1 129 aa0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 YTHDF1Q9BYJ9 559 aaKnown RBP0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 OR14J1Q9UGF5 321 aa0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 SLC7A7Q9UM01 511 aa0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 A4GNTQ9UNA3 340 aa0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 SCINQ9Y6U3 715 aa0.97□□□□□ -2.25
RNU6-239P-201ENST00000390990 A0A087WWV3 80 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 HAT1O14929 419 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 LY6G6DO95868 133 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 CSTBP04080 98 aaKnown RBP0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 CNPP09543 421 aaKnown RBP0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 FDPSP14324 419 aaKnown RBP0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 ETV5P41161 510 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 GABRB2P47870 512 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 LEPRP48357 1165 aaKnown RBP0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 GNAQP50148 359 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 PAX9P55771 341 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 ICA1Q05084 483 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 TDGQ13569 410 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 ALG11Q2TAA5 492 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 BAIAP2L2Q6UXY1 529 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 KSR2Q6VAB6 950 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 ZNF841Q6ZN19 808 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 FMNL3Q8IVF7 1028 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 GPALPP1Q8IXQ4 340 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 C1orf52Q8N6N3 182 aaKnown RBP0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 EMC1Q8N766 993 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 SLC38A9Q8NBW4 561 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 C11orf45Q8TAV5 145 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 PPP4R1Q8TF05 950 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 ATP8B4Q8TF62 1192 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 HSD17B8Q92506 261 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 ARHGAP45Q92619 1136 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 AGAP4Q96P64 663 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 SEMA3CQ99985 751 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 TEX13BQ9BXU2 312 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 HEXA-AS1Q9H8Q6 139 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 SLC28A3Q9HAS3 691 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 MBNL1Q9NR56 388 aaKnown RBP0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 STK39Q9UEW8 545 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 TSPAN16Q9UKR8 245 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 RIPK3Q9Y572 518 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 STYXL1Q9Y6J8 313 aa0.96□□□□□ -2.26
RNU6-239P-201ENST00000390990 GOLGA6L10A0A0M3HER8 536 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 EIF4E1BA6NMX2 242 aaKnown RBP0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 A8MXK9 166 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 PI4K2BG5E9Z4 385 aa0.95□□□□□ -2.26
RNU6-239P-201ENST00000390990 SLCO2B1O94956 709 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms