RNA–Protein interactions for RNA: ENST00000390728.2

MIR548U-201, Transcript of microRNA 548u, humanhuman

BASIC

Gene MIR548U, Length 81 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548U-201ENST00000390728 COL28A1Q2UY09 1125 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 KLHL26Q53HC5 615 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 CELF3Q5SZQ8 465 aaKnown RBP-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 ASPHD2Q6ICH7 369 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 LIN54Q6MZP7 749 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 PAMR1Q6UXH9 720 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 FRRS1Q6ZNA5 592 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 BTN2A1Q7KYR7 527 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 RAB11FIP2Q7L804 512 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 DPP9Q86TI2 863 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 LRP11Q86VZ4 500 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 FAM131BQ86XD5 332 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 PTOV1Q86YD1 416 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 GATAD2AQ86YP4 633 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 C2CD5Q86YS7 1000 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 SLC44A2Q8IWA5 706 aaPredicted RBP-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 DHX40Q8IX18 779 aaKnown RBP-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 NUP37Q8NFH4 326 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 KBTBD8Q8NFY9 601 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 LINS1Q8NG48 757 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 RDM1Q8NG50 284 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 FLVCR1-AS1Q8TAF5 88 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 AGAP11Q8TF27 550 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 ATP8B4Q8TF62 1192 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 NPRL2Q8WTW4 380 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 RAB40AQ8WXH6 277 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 BRI3BPQ8WY22 251 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 HSD17B8Q92506 261 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 APBB2Q92870 758 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 ZNF566Q969W8 418 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 ZNF597Q96LX8 424 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 CEP295NLQ96MC4 621 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 MAP3K3Q99759 626 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 SEMA3CQ99985 751 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 FAM110AQ9BQ89 295 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 TDRD1Q9BXT4 1180 aaKnown RBP-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 PANK2Q9BZ23 570 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 NUF2Q9BZD4 464 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 SLC32A1Q9H598 525 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 ELAC1Q9H777 363 aaKnown RBP-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 LTB4R2Q9NPC1 389 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 STARD7Q9NQZ5 370 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 HOMER2Q9NSB8 354 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 ACSS1Q9NUB1 689 aaPredicted RBP-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 CLEC5AQ9NY25 188 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 NDUFAF4Q9P032 175 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 ABCD2Q9UBJ2 740 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 RPS6KB2Q9UBS0 482 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 CTNNAL1Q9UBT7 734 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 SLC39A10Q9ULF5 831 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 PRRC2BQ5JSZ5 2229 aaKnown RBP-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 FER1L5A0AVI2 2057 aa-0.02□□□□□ -2.41
MIR548U-201ENST00000390728 POGZQ7Z3K3 1410 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 LOC105371242A0A075B767 164 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 IGHV4-30-2A0A087WSY4 118 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 FAM90A7PA6NKC0 464 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 FAM90A22PA8MWA6 464 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 FAM90A12PA8MX19 464 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 FAM90A23PA8MXZ1 464 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 G3V2L1 256 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 TAF4O00268 1085 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 VCYO14598 125 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 BUD23O43709 281 aaKnown RBP-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 ACTL6BO94805 426 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 POP4O95707 220 aaKnown RBP-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 MT-CYBP00156 380 aaPredicted RBP-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 KRT19P08727 400 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 AXLP30530 894 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 LMAN1P49257 510 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 CDH15P55291 814 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 B3GALT5-AS1P59052 145 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 YWHAZP63104 245 aaKnown RBP-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 EDRF1Q3B7T1 1238 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 FAM182AQ5T1J6 154 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 NDUFAF5Q5TEU4 345 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 SERTAD4-AS1Q5TG53 156 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 ZSCAN25Q6NSZ9 544 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 ZNF589Q86UQ0 364 aaPredicted RBP-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 FAM160B2Q86V87 743 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 ZFAND4Q86XD8 727 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 CRYBG2Q8N1P7 616 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 MYCT1Q8N699 235 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 MAGEB6Q8N7X4 407 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 FSIP1Q8NA03 581 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 CSNK1G2-AS1Q8NCQ2 148 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 SMPDL3BQ92485 455 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 EID2BQ96D98 161 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 ZNF486Q96H40 463 aaPredicted RBP-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 TNIP3Q96KP6 325 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 FNBP1Q96RU3 617 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 SIN3AQ96ST3 1273 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 PABPC3Q9H361 631 aaKnown RBP-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 MED20Q9H944 212 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 DDX21Q9NR30 783 aaKnown RBP eCLIP-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 PLSCR3Q9NRY6 295 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 RIPK3Q9Y572 518 aa-0.03□□□□□ -2.41
MIR548U-201ENST00000390728 IGLV4-3A0A075B6K6 122 aa-0.04□□□□□ -2.42
MIR548U-201ENST00000390728 PINLYPA6NC86 204 aa-0.04□□□□□ -2.42
MIR548U-201ENST00000390728 TRIM49BA6NDI0 452 aa-0.04□□□□□ -2.42
MIR548U-201ENST00000390728 PER2O15055 1255 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms