RNA–Protein interactions for RNA: ENST00000390457.2

TRAV27-201, Transcript of T cell receptor alpha variable 27, humanhuman

APPRIS P1 BASIC

Gene TRAV27, Length 425 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27-201ENST00000390457 PCNX1Q96RV3 2341 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 CCDC88CQ9P219 2028 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 LOC285095A0A1B0GVY8 99 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 SSU72P8A0A1W2PR75 194 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 OR5K3A6NET4 321 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 TLCD2A6NGC4 264 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 ARGFXA6NJG6 315 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 C3orf70A6NLC5 250 aaPredicted RBP6.85□□□□□ -1.31
TRAV27-201ENST00000390457 ZNF487B1APH4 448 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 GAPDHSO14556 408 aaPredicted RBP6.85□□□□□ -1.31
TRAV27-201ENST00000390457 NDST3O95803 873 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 CLDN1O95832 211 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 RAB40ALP0C0E4 278 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 KDELR1P24390 212 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 COL8A1P27658 744 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 RORAP35398 523 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 HMGCLP35914 325 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 PBX1P40424 430 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 CTSCP53634 463 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 ITGA1P56199 1179 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 RPS15P62841 145 aaKnown RBP6.85□□□□□ -1.31
TRAV27-201ENST00000390457 TUBB4BP68371 445 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 HSD11B2P80365 405 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 MRPL49Q13405 166 aaKnown RBP6.85□□□□□ -1.31
TRAV27-201ENST00000390457 TUBB2AQ13885 445 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 CHRNA6Q15825 494 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 ZNF789Q5FWF6 425 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 CRB2Q5IJ48 1285 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 METRNLQ641Q3 311 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 SLC6A19Q695T7 634 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 SLC9A4Q6AI14 798 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 ALKBH5Q6P6C2 394 aaKnown RBP6.85□□□□□ -1.31
TRAV27-201ENST00000390457 CYB5D1Q6P9G0 228 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 NT5DC3Q86UY8 548 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 HPS6Q86YV9 775 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 TICAM1Q8IUC6 712 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 DSELQ8IZU8 1212 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 CARFQ8N187 725 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 ZBTB2Q8N680 514 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 RASGEF1AQ8N9B8 481 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 KCTD6Q8NC69 237 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 CCNYQ8ND76 341 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 FDCSPQ8NFU4 85 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 OR8K5Q8NH50 307 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 SPATA22Q8NHS9 363 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 RAPGEF5Q92565 580 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 CXorf40BQ96DE9 158 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 PPM1MQ96MI6 270 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 SMAD5Q99717 465 aaKnown RBP6.85□□□□□ -1.31
TRAV27-201ENST00000390457 BARD1Q99728 777 aaKnown RBP6.85□□□□□ -1.31
TRAV27-201ENST00000390457 BPIFA3Q9BQP9 254 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 TUBB2BQ9BVA1 445 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 NUDT9Q9BW91 350 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 CHST8Q9H2A9 424 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 LATS2Q9NRM7 1088 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 KCND1Q9NSA2 647 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 HAUS2Q9NVX0 235 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 TRIM10Q9UDY6 481 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 ERRFI1Q9UJM3 462 aaPredicted RBP6.85□□□□□ -1.31
TRAV27-201ENST00000390457 BTRCQ9Y297 605 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 ZNF451Q9Y4E5 1061 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 BZW2Q9Y6E2 419 aaKnown RBP6.85□□□□□ -1.31
TRAV27-201ENST00000390457 DNMT3AQ9Y6K1 912 aaPredicted RBP6.85□□□□□ -1.31
TRAV27-201ENST00000390457 DOCK10Q96BY6 2186 aa6.85□□□□□ -1.31
TRAV27-201ENST00000390457 A0A1W2PQJ5 194 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 A1L4Q6 167 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 MEN1O00255 615 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 GPR39O43194 453 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 UGT1A9O60656 530 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 CPNE3O75131 537 aaKnown RBP6.84□□□□□ -1.31
TRAV27-201ENST00000390457 SCRG1O75711 98 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 POP7O75817 140 aaKnown RBP6.84□□□□□ -1.31
TRAV27-201ENST00000390457 CBX6O95503 412 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 ZBTB11O95625 1053 aaPredicted RBP6.84□□□□□ -1.31
TRAV27-201ENST00000390457 MT-CYBP00156 380 aaPredicted RBP6.84□□□□□ -1.31
TRAV27-201ENST00000390457 MSL3P1P0C860 447 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 UGT1A6P19224 532 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 UGT1A1P22309 533 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 UGT1A4P22310 534 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 CD68P34810 354 aaPredicted RBP6.84□□□□□ -1.31
TRAV27-201ENST00000390457 DCTP40126 519 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 KPNA2P52292 529 aaKnown RBP6.84□□□□□ -1.31
TRAV27-201ENST00000390457 TYRO3Q06418 890 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 ABRQ12979 859 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 NFE2L1Q14494 772 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 GPR19Q15760 415 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 TEX44Q53QW1 395 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 PRAMEF17Q5VTA0 474 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 FAM69BQ5VUD6 431 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 ZNF385CQ66K41 422 aaPredicted RBP6.84□□□□□ -1.31
TRAV27-201ENST00000390457 KLHL35Q6PF15 583 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 KDELC1Q6UW63 502 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 FAM198BQ6UWH4 519 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 MAMDC2Q7Z304 686 aaPredicted RBP6.84□□□□□ -1.31
TRAV27-201ENST00000390457 AMZ2Q86W34 360 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 VSIG1Q86XK7 387 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 TRAPPC5Q8IUR0 188 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 MAP7D3Q8IWC1 876 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 DDHD1Q8NEL9 900 aa6.84□□□□□ -1.31
TRAV27-201ENST00000390457 BRSK1Q8TDC3 778 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms