RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 DMXL1Q9Y485 3027 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 SPTA1P02549 2419 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 TECTAO75443 2155 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 CYP3A7-CYP3A51PA0A087WV96 503 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 VWA3AA6NCI4 1184 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 USP17L23D6RBM5 183 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 ZNF195O14628 629 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 OGTO15294 1046 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 KRT14P02533 472 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 VIL1P09327 827 aaKnown RBP-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 FAM200BP0CF97 657 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 GP1BBP13224 206 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 NPR1P16066 1061 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 RRM1P23921 792 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 CYP3A7P24462 503 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 CTSCP53634 463 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 TAS2R50P59544 299 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 IRX3P78415 501 aaPredicted RBP-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 SRPXP78539 464 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 EMX1Q04741 257 aaPredicted RBP-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 STRN3Q13033 797 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 SQSTM1Q13501 440 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 ACVR2BQ13705 512 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 P2RY6Q15077 328 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 PTGES3Q15185 160 aaKnown RBP-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 PRR4Q16378 134 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 ASPRV1Q53RT3 343 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 FAM182AQ5T1J6 154 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 GALNT17Q6IS24 598 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 ZNF544Q6NX49 715 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 SPATA8Q6RVD6 105 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 ZNF704Q6ZNC4 412 aaPredicted RBP-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 PLEKHM3Q6ZWE6 761 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 NET1Q7Z628 596 aaPredicted RBP-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 MICU3Q86XE3 530 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 DENND1CQ8IV53 801 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 FOXRED2Q8IWF2 684 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 NIM1KQ8IY84 436 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 MYOCDQ8IZQ8 938 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 ZCCHC24Q8N2G6 241 aaKnown RBP-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 ZNF433Q8N7K0 673 aaPredicted RBP-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 ZMIZ2Q8NF64 920 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 OR5AP2Q8NGF4 316 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 MORC4Q8TE76 937 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 TEKT5Q96M29 485 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 TEFMQ96QE5 360 aaKnown RBP-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 ZNF382Q96SR6 550 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 YME1L1Q96TA2 773 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 PCYT2Q99447 389 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 ATF6BQ99941 703 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 KATNAL1Q9BW62 490 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 RAB33BQ9H082 229 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 SLC12A5Q9H2X9 1139 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 PRDM11Q9NQV5 511 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 INTS9Q9NV88 658 aaKnown RBP-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 SLC38A7Q9NVC3 462 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 MKS1Q9NXB0 559 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 VNN3Q9NY84 501 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 GLS2Q9UI32 602 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 SLC25A13Q9UJS0 675 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 SPATA2Q9UM82 520 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 RFNGQ9Y644 331 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 ZFHX4Q86UP3 3567 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 CADP27708 2225 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 FREM2Q5SZK8 3169 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 LAMB4A4D0S4 1761 aa-0.88□□□□□ -2.55
RNU6-540P-201ENST00000384622 SPTAN1Q13813 2472 aaKnown RBP-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 RELNP78509 3460 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 C15orf61A6NNL5 157 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 TFECO14948 347 aaPredicted RBP-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 XPOTO43592 962 aaKnown RBP-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 RNASEH2AO75792 299 aaKnown RBP-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 NDUFB4O95168 129 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 STBD1O95210 358 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 TNFP01375 233 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 ZNF286BP0CG31 522 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 UMPSP11172 480 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 SLC12A3P55017 1021 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 PAX9P55771 341 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 ERVPABLB-1P60509 514 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 KRT85P78386 507 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 TLE3Q04726 772 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 MGAT3Q09327 533 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 PSG7Q13046 419 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 FGL2Q14314 439 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 KCTD2Q14681 263 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 ISXQ2M1V0 245 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 ANKRD40Q6AI12 368 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 KIF6Q6ZMV9 814 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 GDPGP1Q6ZNW5 385 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 KRTAP8-1Q8IUC2 63 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 CERS5Q8N5B7 392 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 SLC44A1Q8WWI5 657 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 SMARCD2Q92925 531 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 IGSF8Q969P0 613 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 TRIM63Q969Q1 353 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 AZIN2Q96A70 460 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 IFT74Q96LB3 600 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 GMLQ99445 158 aa-0.89□□□□□ -2.55
RNU6-540P-201ENST00000384622 ACAD9Q9H845 621 aa-0.89□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms