RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 PAPD7Q5XG87 772 aaKnown RBP17.36■□□□□ 0.37
PDLIM4-202ENST00000379018 HGSNATQ68CP4 663 aa17.36■□□□□ 0.37
PDLIM4-202ENST00000379018 TMEM220Q6QAJ8 160 aa17.36■□□□□ 0.37
PDLIM4-202ENST00000379018 NPNTQ6UXI9 565 aa17.36■□□□□ 0.37
PDLIM4-202ENST00000379018 FAM151BQ6UXP7 276 aa17.36■□□□□ 0.37
PDLIM4-202ENST00000379018 DET1Q7L5Y6 550 aa17.36■□□□□ 0.37
PDLIM4-202ENST00000379018 BPHLQ86WA6 291 aaPredicted RBP17.36■□□□□ 0.37
PDLIM4-202ENST00000379018 KMT5CQ86Y97 462 aa17.36■□□□□ 0.37
PDLIM4-202ENST00000379018 RASGEF1AQ8N9B8 481 aa17.36■□□□□ 0.37
PDLIM4-202ENST00000379018 RAPGEF5Q92565 580 aa17.36■□□□□ 0.37
PDLIM4-202ENST00000379018 FAF2Q96CS3 445 aa17.36■□□□□ 0.37
PDLIM4-202ENST00000379018 TCTN2Q96GX1 697 aa17.36■□□□□ 0.37
PDLIM4-202ENST00000379018 C12orf66Q96MD2 445 aa17.36■□□□□ 0.37
PDLIM4-202ENST00000379018 VPS35Q96QK1 796 aa17.36■□□□□ 0.37
PDLIM4-202ENST00000379018 GPR83Q9NYM4 423 aa17.36■□□□□ 0.37
PDLIM4-202ENST00000379018 SEMA5BQ9P283 1151 aa17.36■□□□□ 0.37
PDLIM4-202ENST00000379018 PIKFYVEQ9Y2I7 2098 aa17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 A0A087X0T9 212 aa17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 BUD23O43709 281 aaKnown RBP17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 UGT1A9O60656 530 aa17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 ZBTB11O95625 1053 aaPredicted RBP17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 NDST3O95803 873 aa17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 FAM228BP0C875 321 aa17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 MTHFD1P11586 935 aaKnown RBP17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 UGT1A6P19224 532 aa17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 UGT1A1P22309 533 aa17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 UGT1A4P22310 534 aa17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 ITGA1P56199 1179 aa17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 ATP1A4Q13733 1029 aa17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 PLD5Q8N7P1 536 aa17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 BEND7Q8N7W2 519 aaPredicted RBP17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 ADAMTS17Q8TE56 1095 aa17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 CPLX3Q8WVH0 158 aa17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 PNPLA2Q96AD5 504 aa17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 ZNF501Q96CX3 271 aaPredicted RBP17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 RNF157Q96PX1 679 aa17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 CD180Q99467 661 aa17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 ZCCHC2Q9C0B9 1178 aaKnown RBP17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 SLC7A5P2Q9GIP4 190 aa17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 NAT10Q9H0A0 1025 aaKnown RBP17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 WWP1Q9H0M0 922 aa17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 SLC25A51Q9H1U9 297 aa17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 UGT1A7Q9HAW7 530 aa17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 UGT1A10Q9HAW8 530 aa17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 UGT1A8Q9HAW9 530 aa17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 FANCEQ9HB96 536 aa17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 TCFL5Q9UL49 500 aa17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 CRYBG3Q68DQ2 2970 aa17.35■□□□□ 0.37
PDLIM4-202ENST00000379018 TMEM150CB9EJG8 249 aa17.34■□□□□ 0.37
PDLIM4-202ENST00000379018 MEN1O00255 615 aa17.34■□□□□ 0.37
PDLIM4-202ENST00000379018 CEACAM4O75871 244 aa17.34■□□□□ 0.37
PDLIM4-202ENST00000379018 PROSCO94903 275 aa17.34■□□□□ 0.37
PDLIM4-202ENST00000379018 SERPINC1P01008 464 aa17.34■□□□□ 0.37
PDLIM4-202ENST00000379018 POLR2CP19387 275 aaPredicted RBP17.34■□□□□ 0.37
PDLIM4-202ENST00000379018 KDELR1P24390 212 aa17.34■□□□□ 0.37
PDLIM4-202ENST00000379018 AKT1P31749 480 aa17.34■□□□□ 0.37
PDLIM4-202ENST00000379018 KPNA2P52292 529 aaKnown RBP17.34■□□□□ 0.37
PDLIM4-202ENST00000379018 VAV2P52735 878 aa17.34■□□□□ 0.37
PDLIM4-202ENST00000379018 GSDMDP57764 484 aa17.34■□□□□ 0.37
PDLIM4-202ENST00000379018 DYNLT1P63172 113 aa17.34■□□□□ 0.37
PDLIM4-202ENST00000379018 ABRQ12979 859 aa17.34■□□□□ 0.37
PDLIM4-202ENST00000379018 PTCHD3Q3KNS1 767 aa17.34■□□□□ 0.37
PDLIM4-202ENST00000379018 PLEKHS1Q5SXH7 462 aa17.34■□□□□ 0.37
PDLIM4-202ENST00000379018 FNBP1LQ5T0N5 605 aa17.34■□□□□ 0.37
PDLIM4-202ENST00000379018 IZUMO3Q5VZ72 239 aa17.34■□□□□ 0.37
PDLIM4-202ENST00000379018 ALKBH5Q6P6C2 394 aaKnown RBP17.34■□□□□ 0.37
PDLIM4-202ENST00000379018 DSELQ8IZU8 1212 aa17.34■□□□□ 0.37
PDLIM4-202ENST00000379018 SLC25A41Q8N5S1 370 aa17.34■□□□□ 0.37
PDLIM4-202ENST00000379018 BRSK1Q8TDC3 778 aa17.34■□□□□ 0.37
PDLIM4-202ENST00000379018 CPT1BQ92523 772 aa17.34■□□□□ 0.37
PDLIM4-202ENST00000379018 INSM2Q96T92 566 aaPredicted RBP17.34■□□□□ 0.37
PDLIM4-202ENST00000379018 PCDHGB7Q9Y5F8 929 aa17.34■□□□□ 0.37
PDLIM4-202ENST00000379018 TEP1Q99973 2627 aaKnown RBP17.33■□□□□ 0.36
PDLIM4-202ENST00000379018 A0A1B0GTH6 734 aa17.33■□□□□ 0.36
PDLIM4-202ENST00000379018 SSU72P8A0A1W2PR75 194 aa17.33■□□□□ 0.36
PDLIM4-202ENST00000379018 APOL1O14791 398 aa17.33■□□□□ 0.36
PDLIM4-202ENST00000379018 SERPING1P05155 500 aa17.33■□□□□ 0.36
PDLIM4-202ENST00000379018 CYP2A7P20853 494 aa17.33■□□□□ 0.36
PDLIM4-202ENST00000379018 CDH3P22223 829 aa17.33■□□□□ 0.36
PDLIM4-202ENST00000379018 OTX2P32243 289 aa17.33■□□□□ 0.36
PDLIM4-202ENST00000379018 CA5AP35218 305 aa17.33■□□□□ 0.36
PDLIM4-202ENST00000379018 SPAM1P38567 509 aa17.33■□□□□ 0.36
PDLIM4-202ENST00000379018 GSE1Q14687 1217 aa17.33■□□□□ 0.36
PDLIM4-202ENST00000379018 CISD2Q8N5K1 135 aaKnown RBP17.33■□□□□ 0.36
PDLIM4-202ENST00000379018 ZBTB2Q8N680 514 aa17.33■□□□□ 0.36
PDLIM4-202ENST00000379018 SPDYE1Q8NFV5 336 aaPredicted RBP17.33■□□□□ 0.36
PDLIM4-202ENST00000379018 SNRNP40Q96DI7 357 aaKnown RBP17.33■□□□□ 0.36
PDLIM4-202ENST00000379018 C5orf34Q96MH7 638 aa17.33■□□□□ 0.36
PDLIM4-202ENST00000379018 MAK16Q9BXY0 300 aaKnown RBP17.33■□□□□ 0.36
PDLIM4-202ENST00000379018 GLOD4Q9HC38 313 aa17.33■□□□□ 0.36
PDLIM4-202ENST00000379018 IL26Q9NPH9 171 aa17.33■□□□□ 0.36
PDLIM4-202ENST00000379018 ASF1BQ9NVP2 202 aa17.33■□□□□ 0.36
PDLIM4-202ENST00000379018 BZW2Q9Y6E2 419 aaKnown RBP17.33■□□□□ 0.36
PDLIM4-202ENST00000379018 DOPEY1Q5JWR5 2465 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 A0A0A6YYK5 440 aaPredicted RBP17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 GSAPA4D1B5 854 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 SLC9B1P1A6NJY1 282 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 SMTNL1A8MU46 457 aa17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 PPP1R12AO14974 1030 aaPredicted RBP17.32■□□□□ 0.36
PDLIM4-202ENST00000379018 KCNJ13O60928 360 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms