RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 TDRD1Q9BXT4 1180 aaKnown RBP14□□□□□ -0.17
SHROOM1-203ENST00000378679 MRM3Q9HC36 420 aaKnown RBP14□□□□□ -0.17
SHROOM1-203ENST00000378679 OSER1Q9NX31 292 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 RPL26L1Q9UNX3 145 aaKnown RBP14□□□□□ -0.17
SHROOM1-203ENST00000378679 LRRC37AA6NMS7 1700 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 PGLSO95336 258 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 IFNA14P01570 189 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 EIF2S1P05198 315 aaKnown RBP14□□□□□ -0.17
SHROOM1-203ENST00000378679 CA3P07451 260 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 ATF6P18850 670 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 KELP23276 732 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 STEAP4Q687X5 459 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 RINLQ6ZS11 566 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 HDDC3Q8N4P3 179 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 CPSF7Q8N684 471 aaKnown RBP14□□□□□ -0.17
SHROOM1-203ENST00000378679 SORCS1Q8WY21 1168 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 HERVK_113Q902F9 699 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 OTUB2Q96DC9 234 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 TPD52L3Q96J77 140 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 ZFYVE19Q96K21 471 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 SGK2Q9HBY8 427 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 ANAPC2Q9UJX6 822 aa14□□□□□ -0.17
SHROOM1-203ENST00000378679 NDRG2Q9UN36 371 aaKnown RBP14□□□□□ -0.17
SHROOM1-203ENST00000378679 CHRM1P11229 460 aaPredicted RBP13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 ANPEPP15144 967 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 TIE1P35590 1138 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 PRKAG1P54619 331 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 RALGDSQ12967 914 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 MBTPS1Q14703 1052 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 LHX8Q68G74 356 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 CHST15Q7LFX5 561 aaPredicted RBP13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 SPATA19Q7Z5L4 167 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 SCAMP4Q969E2 229 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 CADM1Q9BY67 442 aaKnown RBP13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 RETREG1Q9H6L5 497 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 ATAD3AQ9NVI7 634 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 HCFC1R1Q9NWW0 138 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 MARCH5Q9NX47 278 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 ZDHHC2Q9UIJ5 367 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 ZCWPW2A0A1B0GU75 182 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 UPK3BL1B0FP48 263 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 UPK3BL2E5RIL1 263 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 PPP2R1BP30154 601 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 VIPR2P41587 438 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 RPS6KA3P51812 740 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 CYP4F2P78329 520 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 ACSBG2Q5FVE4 666 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 DHDDSQ86SQ9 333 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 FAM81AQ8TBF8 368 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 CDK15Q96Q40 435 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 RNF38Q9H0F5 515 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 EBF2Q9HAK2 575 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 NLE1Q9NVX2 485 aaPredicted RBP13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 ELOVL2Q9NXB9 296 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 LCHNA4D1U4 455 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 RFXANKO14593 260 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 KERAO60938 352 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 RAD23AP54725 363 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 CREB5Q02930 508 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 GRM2Q14416 872 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 RAB30Q15771 203 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 ANKLE1Q8NAG6 615 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 ACTRT2Q8TDY3 377 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 DENND1AQ8TEH3 1009 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 GAS2L1Q99501 681 aaPredicted RBP13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 UGT2B28Q9BY64 529 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 IMPAD1Q9NX62 359 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 OR1I1O60431 355 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 SOCS5O75159 536 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 HNRNPA1P09651 372 aaKnown RBP eCLIP13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 EPCAMP16422 314 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 IDSP22304 550 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 POU1F1P28069 291 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 ADARP55265 1226 aaKnown RBP13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 CCDC157Q569K6 752 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 PAOXQ6QHF9 649 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 CYP20A1Q6UW02 462 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 NT5C3BQ969T7 300 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 TMEM79Q9BSE2 394 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 PAIP1Q9H074 479 aaKnown RBP13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 RHBGQ9H310 441 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 ARHGEF3Q9NR81 526 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 TMEM30AQ9NV96 361 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 ZNF229Q9UJW7 825 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 SLC27A6Q9Y2P4 619 aa13.99□□□□□ -0.17
SHROOM1-203ENST00000378679 NDUFS2O75306 463 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 TBX10O75333 385 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 LDLRAP1Q5SW96 308 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 RBM44Q6ZP01 1051 aaKnown RBP13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 EGFL6Q8IUX8 553 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 FBXW8Q8N3Y1 598 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 PTCD3Q96EY7 689 aaKnown RBP13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 TMCC3Q9ULS5 477 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 NME7Q9Y5B8 376 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 K7EPI3 171 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 C8GP07360 202 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 AMD1P17707 334 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 CD70P32970 193 aa13.98□□□□□ -0.17
SHROOM1-203ENST00000378679 CRATP43155 626 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms