RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 PUS10Q3MIT2 529 aaKnown RBP8.65□□□□□ -1.02
LIG3-202ENST00000378526 ZNF705AQ6ZN79 300 aaPredicted RBP8.65□□□□□ -1.02
LIG3-202ENST00000378526 GPRIN3Q6ZVF9 776 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 OR7D4Q8NG98 312 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 TTLL2Q9BWV7 592 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 EGFL7Q9UHF1 273 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 ZNF254O75437 659 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 OAZ2O95190 189 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 EGFRP00533 1210 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 XRCC1P18887 633 aaPredicted RBP8.65□□□□□ -1.02
LIG3-202ENST00000378526 MAKP20794 623 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 UBXN2AP68543 259 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 SLC22A10Q63ZE4 541 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 PPP2R2DQ66LE6 453 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 SPOCD1Q6ZMY3 1216 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 PTAR1Q7Z6K3 402 aaPredicted RBP8.65□□□□□ -1.02
LIG3-202ENST00000378526 MITD1Q8WV92 249 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 FRZBQ92765 325 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 C7orf26Q96N11 449 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 AGXT2Q9BYV1 514 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 PCDHB12Q9Y5F1 795 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 WDR27A2RRH5 827 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 HHLA1C9JL84 531 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 IMPA2O14732 288 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 MAGEB4O15481 346 aaPredicted RBP8.65□□□□□ -1.02
LIG3-202ENST00000378526 ADAM12O43184 909 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 IMPDH1P20839 514 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 SLC7A1P30825 629 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 ERVK-24P63145 666 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 PRKCZQ05513 592 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 GALNT1Q10472 559 aaPredicted RBP8.65□□□□□ -1.02
LIG3-202ENST00000378526 SP140Q13342 867 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 ZNF792Q3KQV3 632 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 CBWD6Q4V339 395 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 TIGD3Q6B0B8 471 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 SLC39A4Q6P5W5 647 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 ZCCHC23Q6ZST2 131 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 ZNF627Q7L945 461 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 WACQ9BTA9 647 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 SLC6A16Q9GZN6 736 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 MAT2BQ9NZL9 334 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 FEM1BQ9UK73 627 aa8.65□□□□□ -1.02
LIG3-202ENST00000378526 LGR5O75473 907 aa8.65□□□□□ -1.03
LIG3-202ENST00000378526 RFPL3O75679 317 aa8.65□□□□□ -1.03
LIG3-202ENST00000378526 TAS2R43P59537 309 aa8.65□□□□□ -1.03
LIG3-202ENST00000378526 ZNF616Q08AN1 781 aa8.65□□□□□ -1.03
LIG3-202ENST00000378526 TATDN1Q6P1N9 297 aa8.65□□□□□ -1.03
LIG3-202ENST00000378526 ZNF773Q6PK81 442 aa8.65□□□□□ -1.03
LIG3-202ENST00000378526 FAM83AQ86UY5 434 aa8.65□□□□□ -1.03
LIG3-202ENST00000378526 OR4A15Q8NGL6 344 aa8.65□□□□□ -1.03
LIG3-202ENST00000378526 MYLIPQ8WY64 445 aa8.65□□□□□ -1.03
LIG3-202ENST00000378526 NKD1Q969G9 470 aa8.65□□□□□ -1.03
LIG3-202ENST00000378526 PCDHGA6Q9Y5G7 932 aa8.65□□□□□ -1.03
LIG3-202ENST00000378526 CDH10Q9Y6N8 788 aa8.65□□□□□ -1.03
LIG3-202ENST00000378526 ZNF780BQ9Y6R6 833 aa8.65□□□□□ -1.03
LIG3-202ENST00000378526 SYNJ1O43426 1573 aa8.65□□□□□ -1.03
LIG3-202ENST00000378526 A0A0G2JN53 185 aa8.65□□□□□ -1.03
LIG3-202ENST00000378526 A0A0J9YYE9 177 aa8.65□□□□□ -1.03
LIG3-202ENST00000378526 F5H5T6 163 aa8.65□□□□□ -1.03
LIG3-202ENST00000378526 GTPBP1O00178 669 aaKnown RBP8.65□□□□□ -1.03
LIG3-202ENST00000378526 PROS1P07225 676 aa8.65□□□□□ -1.03
LIG3-202ENST00000378526 BEST3Q8N1M1 668 aa8.65□□□□□ -1.03
LIG3-202ENST00000378526 CPSF7Q8N684 471 aaKnown RBP8.65□□□□□ -1.03
LIG3-202ENST00000378526 ISOC1Q96CN7 298 aa8.65□□□□□ -1.03
LIG3-202ENST00000378526 AURKBQ96GD4 344 aaPredicted RBP8.65□□□□□ -1.03
LIG3-202ENST00000378526 COQ10AQ96MF6 247 aa8.65□□□□□ -1.03
LIG3-202ENST00000378526 KCNJ16Q9NPI9 418 aa8.65□□□□□ -1.03
LIG3-202ENST00000378526 GABBR1Q9UBS5 961 aa8.65□□□□□ -1.03
LIG3-202ENST00000378526 PRKAB1Q9Y478 270 aa8.65□□□□□ -1.03
LIG3-202ENST00000378526 ZNF891A8MT65 544 aaPredicted RBP8.64□□□□□ -1.03
LIG3-202ENST00000378526 ARL6IP5O75915 188 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 GNB3P16520 340 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 TYMPP19971 482 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 HTD2P86397 168 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 FAAP100Q0VG06 881 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 POU4F2Q12837 409 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 IQGAP2Q13576 1575 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 FAM153CQ494X1 144 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 ZNF662Q6ZS27 426 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 ASB18Q6ZVZ8 466 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 ZNF619Q8N2I2 560 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 FAM109AQ8N4B1 249 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 OR56B2PQ8NGI1 322 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 KAT2BQ92831 832 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 GLT1D1Q96MS3 346 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 GAD1Q99259 594 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 B3GNT4Q9C0J1 378 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 ZNF335Q9H4Z2 1342 aaPredicted RBP8.64□□□□□ -1.03
LIG3-202ENST00000378526 DIRAS1O95057 198 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 SCELO95171 688 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 LARGE1O95461 756 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 MT-CO1P00395 513 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 HGFP14210 728 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 POU6F1Q14863 301 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 UPP1Q16831 310 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 ZNF470Q6ECI4 717 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 ZNF852Q6ZMS4 543 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 ACSBG1Q96GR2 724 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 TBCBQ99426 244 aa8.64□□□□□ -1.03
LIG3-202ENST00000378526 CBWD1Q9BRT8 395 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms