RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 ZNF438Q7Z4V0 828 aa21.48■■□□□ 1.03
GFRA3-202ENST00000378362 TRIM48Q8IWZ4 208 aa21.48■■□□□ 1.03
GFRA3-202ENST00000378362 ZNF514Q96K75 400 aaPredicted RBP21.48■■□□□ 1.03
GFRA3-202ENST00000378362 NRTNQ99748 197 aa21.48■■□□□ 1.03
GFRA3-202ENST00000378362 SEMA6CQ9H3T2 930 aa21.48■■□□□ 1.03
GFRA3-202ENST00000378362 ENTPD2Q9Y5L3 495 aa21.48■■□□□ 1.03
GFRA3-202ENST00000378362 RPS6KL1Q9Y6S9 549 aa21.48■■□□□ 1.03
GFRA3-202ENST00000378362 EFCAB8A8MWE9 144 aa21.47■■□□□ 1.03
GFRA3-202ENST00000378362 D6RAR5 112 aa21.47■■□□□ 1.03
GFRA3-202ENST00000378362 AP3B1O00203 1094 aa21.47■■□□□ 1.03
GFRA3-202ENST00000378362 TP73O15350 636 aa21.47■■□□□ 1.03
GFRA3-202ENST00000378362 MLNP12872 115 aa21.47■■□□□ 1.03
GFRA3-202ENST00000378362 ARCN1P48444 511 aaKnown RBP21.47■■□□□ 1.03
GFRA3-202ENST00000378362 UBE2IP63279 158 aaKnown RBP21.47■■□□□ 1.03
GFRA3-202ENST00000378362 DHX9Q08211 1270 aaKnown RBP21.47■■□□□ 1.03
GFRA3-202ENST00000378362 CYP4F3Q08477 520 aa21.47■■□□□ 1.03
GFRA3-202ENST00000378362 DHX34Q14147 1143 aaKnown RBP21.47■■□□□ 1.03
GFRA3-202ENST00000378362 ANKRD20A4Q4UJ75 823 aa21.47■■□□□ 1.03
GFRA3-202ENST00000378362 ABRAXAS1Q6UWZ7 409 aa21.47■■□□□ 1.03
GFRA3-202ENST00000378362 SLC9B2Q86UD5 537 aa21.47■■□□□ 1.03
GFRA3-202ENST00000378362 GPR150Q8NGU9 434 aa21.47■■□□□ 1.03
GFRA3-202ENST00000378362 LKAAEAR1Q8TD35 194 aa21.47■■□□□ 1.03
GFRA3-202ENST00000378362 INSM2Q96T92 566 aaPredicted RBP21.47■■□□□ 1.03
GFRA3-202ENST00000378362 IMP3Q9NV31 184 aaKnown RBP21.47■■□□□ 1.03
GFRA3-202ENST00000378362 ANAPC5Q9UJX4 755 aa21.47■■□□□ 1.03
GFRA3-202ENST00000378362 IGHV1OR21-1A0A087WYE8 117 aa21.46■■□□□ 1.03
GFRA3-202ENST00000378362 KIR2DS5A0A0G2JLQ3 304 aa21.46■■□□□ 1.03
GFRA3-202ENST00000378362 A0A0G2JNG1 304 aa21.46■■□□□ 1.03
GFRA3-202ENST00000378362 KIR2DS3K7RE56 304 aa21.46■■□□□ 1.03
GFRA3-202ENST00000378362 VIPP01282 170 aa21.46■■□□□ 1.03
GFRA3-202ENST00000378362 NSG1P42857 185 aa21.46■■□□□ 1.03
GFRA3-202ENST00000378362 KIR2DS5Q14953 304 aa21.46■■□□□ 1.03
GFRA3-202ENST00000378362 TRADDQ15628 312 aa21.46■■□□□ 1.03
GFRA3-202ENST00000378362 RPE65Q16518 533 aa21.46■■□□□ 1.03
GFRA3-202ENST00000378362 BBS9Q3SYG4 887 aa21.46■■□□□ 1.03
GFRA3-202ENST00000378362 ZNF574Q6ZN55 896 aaPredicted RBP21.46■■□□□ 1.03
GFRA3-202ENST00000378362 KRT222Q8N1A0 295 aa21.46■■□□□ 1.03
GFRA3-202ENST00000378362 RCBTB1Q8NDN9 531 aa21.46■■□□□ 1.03
GFRA3-202ENST00000378362 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.46■■□□□ 1.03
GFRA3-202ENST00000378362 FAM136AQ96C01 138 aa21.46■■□□□ 1.03
GFRA3-202ENST00000378362 DEPDC7Q96QD5 511 aa21.46■■□□□ 1.03
GFRA3-202ENST00000378362 CCM2Q9BSQ5 444 aa21.46■■□□□ 1.03
GFRA3-202ENST00000378362 MRM3Q9HC36 420 aaKnown RBP21.46■■□□□ 1.03
GFRA3-202ENST00000378362 SARS2Q9NP81 518 aaKnown RBP21.46■■□□□ 1.03
GFRA3-202ENST00000378362 DNMT3AQ9Y6K1 912 aaPredicted RBP21.46■■□□□ 1.03
GFRA3-202ENST00000378362 PNLIPP16233 465 aa21.45■■□□□ 1.03
GFRA3-202ENST00000378362 TYRP1P17643 537 aa21.45■■□□□ 1.03
GFRA3-202ENST00000378362 CSF2RBP32927 897 aa21.45■■□□□ 1.03
GFRA3-202ENST00000378362 DMPKQ09013 629 aa21.45■■□□□ 1.03
GFRA3-202ENST00000378362 MAP9Q49MG5 647 aa21.45■■□□□ 1.03
GFRA3-202ENST00000378362 CXorf40BQ96DE9 158 aa21.45■■□□□ 1.03
GFRA3-202ENST00000378362 ZMYND15Q9H091 742 aa21.45■■□□□ 1.03
GFRA3-202ENST00000378362 EPB41L5Q9HCM4 733 aa21.45■■□□□ 1.03
GFRA3-202ENST00000378362 AK5Q9Y6K8 562 aa21.45■■□□□ 1.03
GFRA3-202ENST00000378362 ZCWPW2A0A1B0GU75 182 aa21.45■■□□□ 1.02
GFRA3-202ENST00000378362 SEC31AO94979 1220 aaKnown RBP21.45■■□□□ 1.02
GFRA3-202ENST00000378362 HGFP14210 728 aa21.45■■□□□ 1.02
GFRA3-202ENST00000378362 XRCC1P18887 633 aaPredicted RBP21.45■■□□□ 1.02
GFRA3-202ENST00000378362 GPR18Q14330 331 aa21.45■■□□□ 1.02
GFRA3-202ENST00000378362 ZNF789Q5FWF6 425 aa21.45■■□□□ 1.02
GFRA3-202ENST00000378362 C3orf38Q5JPI3 329 aa21.45■■□□□ 1.02
GFRA3-202ENST00000378362 SNAP47Q5SQN1 464 aa21.45■■□□□ 1.02
GFRA3-202ENST00000378362 SYDE1Q6ZW31 735 aaPredicted RBP21.45■■□□□ 1.02
GFRA3-202ENST00000378362 HEXDCQ8WVB3 486 aa21.45■■□□□ 1.02
GFRA3-202ENST00000378362 PEX13Q92968 403 aa21.45■■□□□ 1.02
GFRA3-202ENST00000378362 LINC00615Q96LM1 132 aaPredicted RBP21.45■■□□□ 1.02
GFRA3-202ENST00000378362 RMDN2Q96LZ7 410 aa21.45■■□□□ 1.02
GFRA3-202ENST00000378362 C12orf66Q96MD2 445 aa21.45■■□□□ 1.02
GFRA3-202ENST00000378362 CDC23Q9UJX2 597 aa21.45■■□□□ 1.02
GFRA3-202ENST00000378362 PKD1L2Q7Z442 2459 aa21.45■■□□□ 1.02
GFRA3-202ENST00000378362 CACNA1BQ00975 2339 aa21.44■■□□□ 1.02
GFRA3-202ENST00000378362 FAM237BA0A1B0GVD1 139 aa21.44■■□□□ 1.02
GFRA3-202ENST00000378362 UBA6A0AVT1 1052 aaPredicted RBP21.44■■□□□ 1.02
GFRA3-202ENST00000378362 BOP1Q14137 746 aaKnown RBP21.44■■□□□ 1.02
GFRA3-202ENST00000378362 ITIH4Q14624 930 aa21.44■■□□□ 1.02
GFRA3-202ENST00000378362 PHF19Q5T6S3 580 aa21.44■■□□□ 1.02
GFRA3-202ENST00000378362 HIBCHQ6NVY1 386 aaPredicted RBP21.44■■□□□ 1.02
GFRA3-202ENST00000378362 PIM3Q86V86 326 aa21.44■■□□□ 1.02
GFRA3-202ENST00000378362 DENND6AQ8IWF6 608 aa21.44■■□□□ 1.02
GFRA3-202ENST00000378362 NCSTNQ92542 709 aa21.44■■□□□ 1.02
GFRA3-202ENST00000378362 ELMO1Q92556 727 aa21.44■■□□□ 1.02
GFRA3-202ENST00000378362 SNF8Q96H20 258 aa21.44■■□□□ 1.02
GFRA3-202ENST00000378362 AHCYL2Q96HN2 611 aaKnown RBP21.44■■□□□ 1.02
GFRA3-202ENST00000378362 RUNDC3BQ96NL0 473 aa21.44■■□□□ 1.02
GFRA3-202ENST00000378362 COG4Q9H9E3 785 aa21.44■■□□□ 1.02
GFRA3-202ENST00000378362 SLC40A1Q9NP59 571 aa21.44■■□□□ 1.02
GFRA3-202ENST00000378362 KLHL3Q9UH77 587 aa21.44■■□□□ 1.02
GFRA3-202ENST00000378362 SATB2Q9UPW6 733 aa21.44■■□□□ 1.02
GFRA3-202ENST00000378362 CRYL1Q9Y2S2 319 aa21.44■■□□□ 1.02
GFRA3-202ENST00000378362 OR5K4A6NMS3 321 aa21.43■■□□□ 1.02
GFRA3-202ENST00000378362 TCEA3O75764 348 aa21.43■■□□□ 1.02
GFRA3-202ENST00000378362 HALP42357 657 aa21.43■■□□□ 1.02
GFRA3-202ENST00000378362 CTBP1Q13363 440 aa21.43■■□□□ 1.02
GFRA3-202ENST00000378362 NR1D2Q14995 579 aa21.43■■□□□ 1.02
GFRA3-202ENST00000378362 ZNF658BQ4V348 819 aaPredicted RBP21.43■■□□□ 1.02
GFRA3-202ENST00000378362 AGAP9Q5VTM2 703 aa21.43■■□□□ 1.02
GFRA3-202ENST00000378362 WASH2PQ6VEQ5 465 aa21.43■■□□□ 1.02
GFRA3-202ENST00000378362 PACS1Q6VY07 963 aa21.43■■□□□ 1.02
GFRA3-202ENST00000378362 PCGF5Q86SE9 256 aa21.43■■□□□ 1.02
GFRA3-202ENST00000378362 TMEM135Q86UB9 458 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms