RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 UNCXA6NJT0 531 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 CHRNGP07510 517 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 CPN2P22792 545 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 RYKP34925 604 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 CCNFP41002 786 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 ENPEPQ07075 957 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 PTP4A2Q12974 167 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 EOGTQ5NDL2 527 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 SNX20Q7Z614 316 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 SLC51AQ86UW1 340 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 PARP8Q8N3A8 854 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 TCF12Q99081 682 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 TAPBPLQ9BX59 468 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 NR2E1Q9Y466 385 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 ABCC6O95255 1503 aa13.46□□□□□ -0.25
GPC6-201ENST00000377047 SNAP91O60641 907 aa13.46□□□□□ -0.26
GPC6-201ENST00000377047 ALPIP09923 528 aa13.46□□□□□ -0.26
GPC6-201ENST00000377047 MSX2P35548 267 aaPredicted RBP13.46□□□□□ -0.26
GPC6-201ENST00000377047 MLLT3P42568 568 aaPredicted RBP13.46□□□□□ -0.26
GPC6-201ENST00000377047 ACTR3P61158 418 aa13.46□□□□□ -0.26
GPC6-201ENST00000377047 LCP2Q13094 533 aa13.46□□□□□ -0.26
GPC6-201ENST00000377047 FAXDC2Q96IV6 333 aa13.46□□□□□ -0.26
GPC6-201ENST00000377047 RIOK2Q9BVS4 552 aaKnown RBP13.46□□□□□ -0.26
GPC6-201ENST00000377047 DTLQ9NZJ0 730 aa13.46□□□□□ -0.26
GPC6-201ENST00000377047 PPEF2O14830 753 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 KRT36O76013 467 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 UBXN7O94888 489 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 ANPEPP15144 967 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 GATMP50440 423 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 CASP9P55211 416 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 C1QTNF8P60827 252 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 ZNF792Q3KQV3 632 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 FSTL4Q6MZW2 842 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 ZNF516Q92618 1163 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 RELTQ969Z4 430 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 ACDQ96AP0 544 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 AGAP2Q99490 1192 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 IKZF2Q9UKS7 526 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 PRPF19Q9UMS4 504 aaKnown RBP13.45□□□□□ -0.26
GPC6-201ENST00000377047 DRD4P21917 467 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 PNLIPRP1P54315 467 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 PRR5P85299 388 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 NFATC2Q13469 925 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 MED22Q15528 200 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 UAP1L1Q3KQV9 507 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 PHF19Q5T6S3 580 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 GALNT5Q7Z7M9 940 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 PIK3C3Q8NEB9 887 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 LRMDAQ9H2I8 198 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 STAT5AP42229 794 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 CHN2P52757 468 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 LRRC32Q14392 662 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 INAVAQ3KP66 663 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 VPS26BQ4G0F5 336 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 ERICH5Q6P6B1 374 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 FCRL4Q96PJ5 515 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 TRNT1Q96Q11 434 aaKnown RBP13.45□□□□□ -0.26
GPC6-201ENST00000377047 MAP2K7O14733 419 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 LIN7AO14910 233 aaPredicted RBP13.45□□□□□ -0.26
GPC6-201ENST00000377047 SNPHO15079 494 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 CHRNA4P43681 627 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 OR7A2PQ8NGA2 310 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 BPIFB1Q8TDL5 484 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 ZNF384Q8TF68 577 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 SMPDL3BQ92485 455 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 RAB11FIP5Q9BXF6 653 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 INTS10Q9NVR2 710 aaKnown RBP13.45□□□□□ -0.26
GPC6-201ENST00000377047 DMAC2Q9NW81 257 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 EDF1O60869 148 aaKnown RBP13.45□□□□□ -0.26
GPC6-201ENST00000377047 PFKMP08237 780 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 NAPRTQ6XQN6 538 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 DBTP11182 482 aaKnown RBP13.45□□□□□ -0.26
GPC6-201ENST00000377047 OGNP20774 298 aaKnown RBP13.45□□□□□ -0.26
GPC6-201ENST00000377047 GLYATQ6IB77 296 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 SPPL2CQ8IUH8 684 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 POF1BQ8WVV4 589 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 POP5Q969H6 163 aaKnown RBP13.45□□□□□ -0.26
GPC6-201ENST00000377047 NEUROD4Q9HD90 331 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 TDP1Q9NUW8 608 aa13.45□□□□□ -0.26
GPC6-201ENST00000377047 SAP18O00422 153 aaKnown RBP13.44□□□□□ -0.26
GPC6-201ENST00000377047 IDH3BO43837 385 aa13.44□□□□□ -0.26
GPC6-201ENST00000377047 MTHFRP42898 656 aa13.44□□□□□ -0.26
GPC6-201ENST00000377047 PPIDQ08752 370 aaKnown RBP13.44□□□□□ -0.26
GPC6-201ENST00000377047 NAIF1Q69YI7 327 aaPredicted RBP13.44□□□□□ -0.26
GPC6-201ENST00000377047 Q6ZVU0 165 aa13.44□□□□□ -0.26
GPC6-201ENST00000377047 ESAMQ96AP7 390 aa13.44□□□□□ -0.26
GPC6-201ENST00000377047 C12orf65Q9H3J6 166 aaKnown RBP13.44□□□□□ -0.26
GPC6-201ENST00000377047 PNO1Q9NRX1 252 aaKnown RBP13.44□□□□□ -0.26
GPC6-201ENST00000377047 FBXL12Q9NXK8 326 aa13.44□□□□□ -0.26
GPC6-201ENST00000377047 EDDM13A0A1B0GTR0 161 aa13.44□□□□□ -0.26
GPC6-201ENST00000377047 KPNA4O00629 521 aaPredicted RBP13.44□□□□□ -0.26
GPC6-201ENST00000377047 SLC1A2P43004 574 aa13.44□□□□□ -0.26
GPC6-201ENST00000377047 HEPACAMQ14CZ8 416 aa13.44□□□□□ -0.26
GPC6-201ENST00000377047 ANKRD46Q86W74 232 aa13.44□□□□□ -0.26
GPC6-201ENST00000377047 DAW1Q8N136 415 aa13.44□□□□□ -0.26
GPC6-201ENST00000377047 KCT2Q8NC54 265 aa13.44□□□□□ -0.26
GPC6-201ENST00000377047 OR13C4Q8NGS5 318 aa13.44□□□□□ -0.26
GPC6-201ENST00000377047 PRICKLE1Q96MT3 831 aaPredicted RBP13.44□□□□□ -0.26
GPC6-201ENST00000377047 RNPEPL1Q9HAU8 725 aa13.44□□□□□ -0.26
GPC6-201ENST00000377047 RNF186Q9NXI6 227 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms