RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 KIAA0754O94854 1291 aa20.6■□□□□ 0.89
VSX1-201ENST00000376707 LPOP22079 712 aaPredicted RBP20.6■□□□□ 0.89
VSX1-201ENST00000376707 OAS2P29728 719 aaKnown RBP20.6■□□□□ 0.89
VSX1-201ENST00000376707 DLSTP36957 453 aa20.6■□□□□ 0.89
VSX1-201ENST00000376707 NAP1L1P55209 391 aaKnown RBP20.6■□□□□ 0.89
VSX1-201ENST00000376707 RWDD2BP57060 319 aa20.6■□□□□ 0.89
VSX1-201ENST00000376707 OTUD4Q01804 1114 aaKnown RBP20.6■□□□□ 0.89
VSX1-201ENST00000376707 PRPSAP1Q14558 356 aa20.6■□□□□ 0.89
VSX1-201ENST00000376707 TAF1AQ15573 450 aaPredicted RBP20.6■□□□□ 0.89
VSX1-201ENST00000376707 DEFB109BQ30KR1 87 aa20.6■□□□□ 0.89
VSX1-201ENST00000376707 DET1Q7L5Y6 550 aa20.6■□□□□ 0.89
VSX1-201ENST00000376707 TMEM139Q8IV31 216 aa20.6■□□□□ 0.89
VSX1-201ENST00000376707 GALNT6Q8NCL4 622 aa20.6■□□□□ 0.89
VSX1-201ENST00000376707 ACRBPQ8NEB7 543 aa20.6■□□□□ 0.89
VSX1-201ENST00000376707 ACTL9Q8TC94 416 aa20.6■□□□□ 0.89
VSX1-201ENST00000376707 BAG1Q99933 345 aaPredicted RBP20.6■□□□□ 0.89
VSX1-201ENST00000376707 APOL2Q9BQE5 337 aa20.6■□□□□ 0.89
VSX1-201ENST00000376707 IMP3Q9NV31 184 aaKnown RBP20.6■□□□□ 0.89
VSX1-201ENST00000376707 LNPEPQ9UIQ6 1025 aa20.6■□□□□ 0.89
VSX1-201ENST00000376707 AAR2Q9Y312 384 aaKnown RBP20.6■□□□□ 0.89
VSX1-201ENST00000376707 FLNBO75369 2602 aaKnown RBP20.59■□□□□ 0.89
VSX1-201ENST00000376707 BOD1L1Q8NFC6 3051 aa20.59■□□□□ 0.89
VSX1-201ENST00000376707 GRID2IPA4D2P6 1211 aa20.59■□□□□ 0.89
VSX1-201ENST00000376707 FGF5P12034 268 aa20.59■□□□□ 0.89
VSX1-201ENST00000376707 NELFEP18615 380 aaKnown RBP20.59■□□□□ 0.89
VSX1-201ENST00000376707 EIF3EP60228 445 aaKnown RBP20.59■□□□□ 0.89
VSX1-201ENST00000376707 PPP1R3BQ86XI6 285 aa20.59■□□□□ 0.89
VSX1-201ENST00000376707 PTRH1Q86Y79 214 aaKnown RBP20.59■□□□□ 0.89
VSX1-201ENST00000376707 BEND7Q8N7W2 519 aaPredicted RBP20.59■□□□□ 0.89
VSX1-201ENST00000376707 OR4K2Q8NGD2 314 aa20.59■□□□□ 0.89
VSX1-201ENST00000376707 APOBEC4Q8WW27 367 aaKnown RBP20.59■□□□□ 0.89
VSX1-201ENST00000376707 UBXN4Q92575 508 aa20.59■□□□□ 0.89
VSX1-201ENST00000376707 ALG3Q92685 438 aa20.59■□□□□ 0.89
VSX1-201ENST00000376707 GORASP1Q9BQQ3 440 aa20.59■□□□□ 0.89
VSX1-201ENST00000376707 ASB8Q9H765 288 aa20.59■□□□□ 0.89
VSX1-201ENST00000376707 PCDHB3Q9Y5E6 796 aa20.59■□□□□ 0.89
VSX1-201ENST00000376707 MRPS18BQ9Y676 258 aaKnown RBP20.59■□□□□ 0.89
VSX1-201ENST00000376707 ASH1LQ9NR48 2969 aaKnown RBP20.59■□□□□ 0.89
VSX1-201ENST00000376707 SPTA1P02549 2419 aa20.58■□□□□ 0.89
VSX1-201ENST00000376707 SETXQ7Z333 2677 aaKnown RBP20.58■□□□□ 0.89
VSX1-201ENST00000376707 C5orf60A6NFR6 353 aa20.58■□□□□ 0.89
VSX1-201ENST00000376707 KCNN4O15554 427 aa20.58■□□□□ 0.89
VSX1-201ENST00000376707 SPAG6O75602 509 aa20.58■□□□□ 0.89
VSX1-201ENST00000376707 SRP72O76094 671 aaKnown RBP20.58■□□□□ 0.89
VSX1-201ENST00000376707 RBP3P10745 1247 aa20.58■□□□□ 0.89
VSX1-201ENST00000376707 MTHFD1P11586 935 aaKnown RBP20.58■□□□□ 0.89
VSX1-201ENST00000376707 PSMB4P28070 264 aa20.58■□□□□ 0.89
VSX1-201ENST00000376707 CETN2P41208 172 aa20.58■□□□□ 0.89
VSX1-201ENST00000376707 PPP1CAP62136 330 aa20.58■□□□□ 0.89
VSX1-201ENST00000376707 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.58■□□□□ 0.89
VSX1-201ENST00000376707 CRTC2Q53ET0 693 aaPredicted RBP20.58■□□□□ 0.89
VSX1-201ENST00000376707 ANKRD20A2Q5SQ80 823 aa20.58■□□□□ 0.89
VSX1-201ENST00000376707 ANKRD20A1Q5TYW2 823 aa20.58■□□□□ 0.89
VSX1-201ENST00000376707 ANKRD20A3Q5VUR7 823 aa20.58■□□□□ 0.89
VSX1-201ENST00000376707 METRNLQ641Q3 311 aa20.58■□□□□ 0.89
VSX1-201ENST00000376707 DARS2Q6PI48 645 aaKnown RBP20.58■□□□□ 0.89
VSX1-201ENST00000376707 RANBP10Q6VN20 620 aa20.58■□□□□ 0.89
VSX1-201ENST00000376707 SIDT2Q8NBJ9 832 aaKnown RBP20.58■□□□□ 0.89
VSX1-201ENST00000376707 WWP1Q9H0M0 922 aa20.58■□□□□ 0.89
VSX1-201ENST00000376707 PDE7BQ9NP56 450 aa20.58■□□□□ 0.89
VSX1-201ENST00000376707 FAM8A1Q9UBU6 413 aa20.58■□□□□ 0.89
VSX1-201ENST00000376707 FKBPLQ9UIM3 349 aa20.58■□□□□ 0.89
VSX1-201ENST00000376707 CROTQ9UKG9 612 aa20.58■□□□□ 0.89
VSX1-201ENST00000376707 CFAP20Q9Y6A4 193 aaKnown RBP20.58■□□□□ 0.89
VSX1-201ENST00000376707 TLN1Q9Y490 2541 aaKnown RBP20.57■□□□□ 0.88
VSX1-201ENST00000376707 IGHV5-51A0A0C4DH38 117 aa20.57■□□□□ 0.88
VSX1-201ENST00000376707 KLHL33A6NCF5 533 aa20.57■□□□□ 0.88
VSX1-201ENST00000376707 MGAT4DA6NG13 374 aa20.57■□□□□ 0.88
VSX1-201ENST00000376707 TJP3O95049 919 aa20.57■□□□□ 0.88
VSX1-201ENST00000376707 CRTAMO95727 393 aa20.57■□□□□ 0.88
VSX1-201ENST00000376707 CCNYL3P0C7X3 344 aa20.57■□□□□ 0.88
VSX1-201ENST00000376707 PYGMP11217 842 aa20.57■□□□□ 0.88
VSX1-201ENST00000376707 F8A1P23610 371 aa20.57■□□□□ 0.88
VSX1-201ENST00000376707 ADRA1AP35348 466 aa20.57■□□□□ 0.88
VSX1-201ENST00000376707 ARL4DP49703 201 aa20.57■□□□□ 0.88
VSX1-201ENST00000376707 TUBB3Q13509 450 aa20.57■□□□□ 0.88
VSX1-201ENST00000376707 OLIG2Q13516 323 aa20.57■□□□□ 0.88
VSX1-201ENST00000376707 ATP1A1-AS1Q5TC04 95 aa20.57■□□□□ 0.88
VSX1-201ENST00000376707 C9orf43Q8TAL5 461 aaPredicted RBP20.57■□□□□ 0.88
VSX1-201ENST00000376707 DCUN1D1Q96GG9 259 aa20.57■□□□□ 0.88
VSX1-201ENST00000376707 SLC41A2Q96JW4 573 aa20.57■□□□□ 0.88
VSX1-201ENST00000376707 C12orf66Q96MD2 445 aa20.57■□□□□ 0.88
VSX1-201ENST00000376707 FAM118BQ9BPY3 351 aa20.57■□□□□ 0.88
VSX1-201ENST00000376707 IMPACTQ9P2X3 320 aa20.57■□□□□ 0.88
VSX1-201ENST00000376707 ACSL5Q9ULC5 683 aa20.57■□□□□ 0.88
VSX1-201ENST00000376707 KCTD3Q9Y597 815 aa20.57■□□□□ 0.88
VSX1-201ENST00000376707 GOLGA6L3A6NEY3 463 aa20.56■□□□□ 0.88
VSX1-201ENST00000376707 KATNA1O75449 491 aa20.56■□□□□ 0.88
VSX1-201ENST00000376707 MT-ND3P03897 115 aa20.56■□□□□ 0.88
VSX1-201ENST00000376707 SLC35G4P0C7Q5 338 aa20.56■□□□□ 0.88
VSX1-201ENST00000376707 CDC25BP30305 580 aa20.56■□□□□ 0.88
VSX1-201ENST00000376707 PDE1BQ01064 536 aa20.56■□□□□ 0.88
VSX1-201ENST00000376707 SEPT6Q14141 434 aa20.56■□□□□ 0.88
VSX1-201ENST00000376707 DNTTIP2Q5QJE6 756 aaKnown RBP20.56■□□□□ 0.88
VSX1-201ENST00000376707 KIAA1328Q86T90 577 aa20.56■□□□□ 0.88
VSX1-201ENST00000376707 OR2L2Q8NH16 312 aa20.56■□□□□ 0.88
VSX1-201ENST00000376707 CCDC110Q8TBZ0 833 aa20.56■□□□□ 0.88
VSX1-201ENST00000376707 NAT14Q8WUY8 206 aa20.56■□□□□ 0.88
VSX1-201ENST00000376707 LRRC45Q96CN5 670 aa20.56■□□□□ 0.88
VSX1-201ENST00000376707 SPATA13Q96N96 652 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms