RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 TSPAN14Q8NG11 270 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 SPPL2AQ8TCT8 520 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 ACTRT2Q8TDY3 377 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 FBXL20Q96IG2 436 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 ITCHQ96J02 903 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 C8orf48Q96LL4 319 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 CLSTN3Q9BQT9 956 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 ERVK-6Q9BXR3 956 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 RIBC2Q9H4K1 309 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 MARCH5Q9NX47 278 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 CACNA2D2Q9NY47 1150 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 OAZ3Q9UMX2 235 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 SLC22A14Q9Y267 594 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 Q9Y3F1 56 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 CABIN1Q9Y6J0 2220 aa11.52□□□□□ -0.57
DDR1-227ENST00000376570 CACNA1IQ9P0X4 2223 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 ATP6V1G1O75348 118 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 OAZ2O95190 189 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 PHKG1Q16816 387 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 XKR6Q5GH73 641 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 CACHD1Q5VU97 1274 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 SUSD1Q6UWL2 747 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 DPY19L3Q6ZPD9 716 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 UMODL1-AS1Q8N2C9 162 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 PGBD3Q8N328 593 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 HJURPQ8NCD3 748 aaPredicted RBP11.51□□□□□ -0.57
DDR1-227ENST00000376570 FEM1AQ9BSK4 669 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 TRIM15Q9C019 465 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 MFSD1Q9H3U5 465 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 RASSF1Q9NS23 344 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 TRAV19A0A0A6YYK7 116 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 LOC730098B7Z3J9 87 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 hCG_2039718K7EN88 272 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 TNFAIP8O95379 198 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 GSRP00390 522 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 OPN1SWP03999 348 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 CD1DP15813 335 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 VIPR2P41587 438 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 TLR1Q15399 786 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 ZNF284Q2VY69 593 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 AARS2Q5JTZ9 985 aaKnown RBP11.51□□□□□ -0.57
DDR1-227ENST00000376570 LY6G5CQ5SRR4 150 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 RAET1GQ6H3X3 334 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 SPRED2Q7Z698 418 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 MRPL10Q7Z7H8 261 aaKnown RBP11.51□□□□□ -0.57
DDR1-227ENST00000376570 LSRQ86X29 649 aaPredicted RBP11.51□□□□□ -0.57
DDR1-227ENST00000376570 HS3ST5Q8IZT8 346 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 LIX1Q8N485 282 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 BPIFB6Q8NFQ5 453 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 DPF3Q92784 378 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 TMEM159Q96B96 161 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 DGCR14Q96DF8 476 aaKnown RBP11.51□□□□□ -0.57
DDR1-227ENST00000376570 FAR2Q96K12 515 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 CASD1Q96PB1 797 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 ZNF334Q9HCZ1 680 aaPredicted RBP11.51□□□□□ -0.57
DDR1-227ENST00000376570 ATXN10Q9UBB4 475 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 ZNF831Q5JPB2 1677 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 EI24O14681 340 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 CHRM5P08912 532 aaPredicted RBP11.51□□□□□ -0.57
DDR1-227ENST00000376570 POU2F1P14859 743 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 MAGP20916 626 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 KPNA1P52294 538 aaPredicted RBP11.51□□□□□ -0.57
DDR1-227ENST00000376570 POLR2JP52435 117 aaKnown RBP11.51□□□□□ -0.57
DDR1-227ENST00000376570 IL5RAQ01344 420 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 CYP4F3Q08477 520 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 GTF2H2Q13888 395 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 TRIM25Q14258 630 aaKnown RBP11.51□□□□□ -0.57
DDR1-227ENST00000376570 PCBP2Q15366 365 aaKnown RBP eCLIP11.51□□□□□ -0.578e-7■■■■■ 32.5
DDR1-227ENST00000376570 TGFBIQ15582 683 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 TTLL9Q3SXZ7 439 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 GLYATQ6IB77 296 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 ZCCHC8Q6NZY4 707 aaKnown RBP11.51□□□□□ -0.57
DDR1-227ENST00000376570 GTF2H2CQ6P1K8 395 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 FBXL19Q6PCT2 694 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 CD300LGQ6UXG3 332 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 TRIM73Q86UV7 250 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 SYT12Q8IV01 421 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 NKAPQ8N5F7 415 aaKnown RBP11.51□□□□□ -0.57
DDR1-227ENST00000376570 DTNBP1Q96EV8 351 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 TSGA13Q96PP4 275 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 IKZF3Q9UKT9 509 aa11.51□□□□□ -0.57
DDR1-227ENST00000376570 TTC36A6NLP5 189 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 GRXCR1A8MXD5 290 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 COL6A1P12109 1028 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 POLR2EP19388 210 aaKnown RBP11.5□□□□□ -0.57
DDR1-227ENST00000376570 CAPN3P20807 821 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 HNF1BP35680 557 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 LMAN2Q12907 356 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 MSLNQ13421 630 aaPredicted RBP11.5□□□□□ -0.57
DDR1-227ENST00000376570 SKIV2LQ15477 1246 aaKnown RBP11.5□□□□□ -0.57
DDR1-227ENST00000376570 XKR4Q5GH76 650 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 GPR107Q5VW38 600 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 CPSF7Q8N684 471 aaKnown RBP11.5□□□□□ -0.57
DDR1-227ENST00000376570 PRICKLE1Q96MT3 831 aaPredicted RBP11.5□□□□□ -0.57
DDR1-227ENST00000376570 SLC29A1Q99808 456 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 RBMX2Q9Y388 322 aaKnown RBP11.5□□□□□ -0.57
DDR1-227ENST00000376570 ORC6Q9Y5N6 252 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 PRSS21Q9Y6M0 314 aa11.5□□□□□ -0.57
DDR1-227ENST00000376570 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.5□□□□□ -0.57
DDR1-227ENST00000376570 CFAP99D6REC4 459 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms