RNA–Protein interactions for RNA: ENST00000375784.7

CLIC1-208, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-208ENST00000375784 KRT14P02533 472 aa16.3■□□□□ 0.2
CLIC1-208ENST00000375784 ATP1B2P14415 290 aaPredicted RBP16.3■□□□□ 0.2
CLIC1-208ENST00000375784 PSMA3P25788 255 aa16.3■□□□□ 0.2
CLIC1-208ENST00000375784 RPL10P27635 214 aaKnown RBP16.3■□□□□ 0.2
CLIC1-208ENST00000375784 CD1CP29017 333 aa16.3■□□□□ 0.2
CLIC1-208ENST00000375784 CCKBRP32239 447 aa16.3■□□□□ 0.2
CLIC1-208ENST00000375784 COILP38432 576 aaPredicted RBP16.3■□□□□ 0.2
CLIC1-208ENST00000375784 HALP42357 657 aa16.3■□□□□ 0.2
CLIC1-208ENST00000375784 NPY2RP49146 381 aa16.3■□□□□ 0.2
CLIC1-208ENST00000375784 SARNPP82979 210 aaKnown RBP16.3■□□□□ 0.2
CLIC1-208ENST00000375784 DMPKQ09013 629 aa16.3■□□□□ 0.2
CLIC1-208ENST00000375784 EIF3IQ13347 325 aaKnown RBP16.3■□□□□ 0.2
CLIC1-208ENST00000375784 SQSTM1Q13501 440 aa16.3■□□□□ 0.2
CLIC1-208ENST00000375784 TRIP13Q15645 432 aaPredicted RBP16.3■□□□□ 0.2
CLIC1-208ENST00000375784 SEPT7Q16181 437 aaKnown RBP16.3■□□□□ 0.2
CLIC1-208ENST00000375784 CYP1B1Q16678 543 aa16.3■□□□□ 0.2
CLIC1-208ENST00000375784 TSTD2Q5T7W7 516 aa16.3■□□□□ 0.2
CLIC1-208ENST00000375784 AGAP9Q5VTM2 703 aa16.3■□□□□ 0.2
CLIC1-208ENST00000375784 CCDC137Q6PK04 289 aaKnown RBP16.3■□□□□ 0.2
CLIC1-208ENST00000375784 XKR5Q6UX68 686 aa16.3■□□□□ 0.2
CLIC1-208ENST00000375784 PPHLN1Q8NEY8 458 aaKnown RBP16.3■□□□□ 0.2
CLIC1-208ENST00000375784 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.3■□□□□ 0.22e-11■■□□□ 12.5
CLIC1-208ENST00000375784 TMEM159Q96B96 161 aa16.3■□□□□ 0.2
CLIC1-208ENST00000375784 LIN37Q96GY3 246 aaPredicted RBP16.3■□□□□ 0.2
CLIC1-208ENST00000375784 TTC1Q99614 292 aa16.3■□□□□ 0.2
CLIC1-208ENST00000375784 FOXP3Q9BZS1 431 aa16.3■□□□□ 0.2
CLIC1-208ENST00000375784 RDH14Q9HBH5 336 aa16.3■□□□□ 0.2
CLIC1-208ENST00000375784 EPB41L5Q9HCM4 733 aa16.3■□□□□ 0.2
CLIC1-208ENST00000375784 STARD5Q9NSY2 213 aa16.3■□□□□ 0.2
CLIC1-208ENST00000375784 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.3■□□□□ 0.2
CLIC1-208ENST00000375784 BFARQ9NZS9 450 aa16.3■□□□□ 0.2
CLIC1-208ENST00000375784 AKAP7Q9P0M2 348 aaPredicted RBP16.3■□□□□ 0.2
CLIC1-208ENST00000375784 PYCARDQ9ULZ3 195 aa16.3■□□□□ 0.2
CLIC1-208ENST00000375784 UNC13CQ8NB66 2214 aa16.3■□□□□ 0.2
CLIC1-208ENST00000375784 SCN8AQ9UQD0 1980 aa16.29■□□□□ 0.2
CLIC1-208ENST00000375784 IGHV1OR21-1A0A087WYE8 117 aa16.29■□□□□ 0.2
CLIC1-208ENST00000375784 TRBV5-4A0A0C4DH59 114 aa16.29■□□□□ 0.2
CLIC1-208ENST00000375784 CCDC78A2IDD5 438 aa16.29■□□□□ 0.2
CLIC1-208ENST00000375784 MGAT4DA6NG13 374 aa16.29■□□□□ 0.2
CLIC1-208ENST00000375784 PRR19A6NJB7 356 aa16.29■□□□□ 0.2
CLIC1-208ENST00000375784 ACRV1P26436 265 aa16.29■□□□□ 0.2
CLIC1-208ENST00000375784 PDX1P52945 283 aa16.29■□□□□ 0.2
CLIC1-208ENST00000375784 DRG2P55039 364 aaKnown RBP16.29■□□□□ 0.2
CLIC1-208ENST00000375784 ZFP36L1Q07352 338 aaKnown RBP16.29■□□□□ 0.2
CLIC1-208ENST00000375784 GPS1Q13098 491 aa16.29■□□□□ 0.2
CLIC1-208ENST00000375784 BCL7AQ4VC05 210 aa16.29■□□□□ 0.2
CLIC1-208ENST00000375784 PCID2Q5JVF3 399 aa16.29■□□□□ 0.2
CLIC1-208ENST00000375784 TTC27Q6P3X3 843 aa16.29■□□□□ 0.2
CLIC1-208ENST00000375784 ATG14Q6ZNE5 492 aa16.29■□□□□ 0.2
CLIC1-208ENST00000375784 B3GNT8Q7Z7M8 397 aa16.29■□□□□ 0.2
CLIC1-208ENST00000375784 SERPINA9Q86WD7 417 aa16.29■□□□□ 0.2
CLIC1-208ENST00000375784 RBM12BQ8IXT5 1001 aaKnown RBP16.29■□□□□ 0.2
CLIC1-208ENST00000375784 BEND7Q8N7W2 519 aaPredicted RBP16.29■□□□□ 0.2
CLIC1-208ENST00000375784 GRK7Q8WTQ7 553 aa16.29■□□□□ 0.2
CLIC1-208ENST00000375784 PEX13Q92968 403 aa16.29■□□□□ 0.2
CLIC1-208ENST00000375784 CXorf40BQ96DE9 158 aa16.29■□□□□ 0.2
CLIC1-208ENST00000375784 IL22Q9GZX6 179 aa16.29■□□□□ 0.2
CLIC1-208ENST00000375784 ZMYND15Q9H091 742 aa16.29■□□□□ 0.2
CLIC1-208ENST00000375784 VPS37BQ9H9H4 285 aa16.29■□□□□ 0.2
CLIC1-208ENST00000375784 POT1Q9NUX5 634 aa16.29■□□□□ 0.2
CLIC1-208ENST00000375784 TCAF1Q9Y4C2 921 aa16.29■□□□□ 0.2
CLIC1-208ENST00000375784 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.28■□□□□ 0.2
CLIC1-208ENST00000375784 ZNF185O15231 689 aa16.28■□□□□ 0.2
CLIC1-208ENST00000375784 DUX1O43812 170 aa16.28■□□□□ 0.2
CLIC1-208ENST00000375784 PHF2O75151 1096 aa16.28■□□□□ 0.2
CLIC1-208ENST00000375784 TPSB2P20231 275 aa16.28■□□□□ 0.2
CLIC1-208ENST00000375784 PBLDP30039 288 aaPredicted RBP16.28■□□□□ 0.2
CLIC1-208ENST00000375784 PPARGP37231 505 aaPredicted RBP16.28■□□□□ 0.2
CLIC1-208ENST00000375784 SLC19A1P41440 591 aa16.28■□□□□ 0.2
CLIC1-208ENST00000375784 FNTAP49354 379 aa16.28■□□□□ 0.2
CLIC1-208ENST00000375784 VPS41P49754 854 aa16.28■□□□□ 0.2
CLIC1-208ENST00000375784 ARSDP51689 593 aa16.28■□□□□ 0.2
CLIC1-208ENST00000375784 EPHA4P54764 986 aa16.28■□□□□ 0.2
CLIC1-208ENST00000375784 SESN2P58004 480 aaPredicted RBP16.28■□□□□ 0.2
CLIC1-208ENST00000375784 UBE2IP63279 158 aaKnown RBP16.28■□□□□ 0.2
CLIC1-208ENST00000375784 PRAMEP78395 509 aa16.28■□□□□ 0.2
CLIC1-208ENST00000375784 TPSAB1Q15661 275 aa16.28■□□□□ 0.2
CLIC1-208ENST00000375784 PHF19Q5T6S3 580 aa16.28■□□□□ 0.2
CLIC1-208ENST00000375784 LYPLAL1Q5VWZ2 237 aa16.28■□□□□ 0.2
CLIC1-208ENST00000375784 NKAIN2Q5VXU1 208 aa16.28■□□□□ 0.2
CLIC1-208ENST00000375784 METRNLQ641Q3 311 aa16.28■□□□□ 0.2
CLIC1-208ENST00000375784 RAB11FIP2Q7L804 512 aa16.28■□□□□ 0.2
CLIC1-208ENST00000375784 ZNF761Q86XN6 746 aaPredicted RBP16.28■□□□□ 0.2
CLIC1-208ENST00000375784 FBXO39Q8N4B4 442 aa16.28■□□□□ 0.2
CLIC1-208ENST00000375784 OR4D9Q8NGE8 314 aa16.28■□□□□ 0.2
CLIC1-208ENST00000375784 OR2L2Q8NH16 312 aa16.28■□□□□ 0.2
CLIC1-208ENST00000375784 HDAC10Q969S8 669 aa16.28■□□□□ 0.2
CLIC1-208ENST00000375784 LINC00615Q96LM1 132 aaPredicted RBP16.28■□□□□ 0.2
CLIC1-208ENST00000375784 NAPGQ99747 312 aaPredicted RBP16.28■□□□□ 0.2
CLIC1-208ENST00000375784 CMKLR1Q99788 373 aa16.28■□□□□ 0.2
CLIC1-208ENST00000375784 EPB41L1Q9H4G0 881 aa16.28■□□□□ 0.2
CLIC1-208ENST00000375784 UCK1Q9HA47 277 aa16.28■□□□□ 0.2
CLIC1-208ENST00000375784 SMARCAL1Q9NZC9 954 aa16.28■□□□□ 0.2
CLIC1-208ENST00000375784 SCHIP1Q9P0W5 487 aaPredicted RBP16.28■□□□□ 0.2
CLIC1-208ENST00000375784 ACSL5Q9ULC5 683 aa16.28■□□□□ 0.2
CLIC1-208ENST00000375784 COL27A1Q8IZC6 1860 aaPredicted RBP16.28■□□□□ 0.2
CLIC1-208ENST00000375784 PTPN13Q12923 2485 aa16.27■□□□□ 0.2
CLIC1-208ENST00000375784 IGLV3-16A0A075B6K0 115 aa16.27■□□□□ 0.2
CLIC1-208ENST00000375784 CTAGE9A4FU28 777 aa16.27■□□□□ 0.2
CLIC1-208ENST00000375784 LILRA5A6NI73 299 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms