RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 PLEKHG4Q58EX7 1191 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 SULT1C3Q6IMI6 304 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 HFE2Q6ZVN8 426 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 TMPRSS11BQ86T26 416 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 SUSD6Q92537 303 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 CCDC106Q9BWC9 280 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 PRDM8Q9NQV8 689 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 DPP7Q9UHL4 492 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 MYH11P35749 1972 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 MYH15Q9Y2K3 1946 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 ZNF99A8MXY4 864 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-203ENST00000375274 SLC28A2O43868 658 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 PLOD3O60568 738 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 PCSK2P16519 638 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 NUP62P37198 522 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-203ENST00000375274 CHIT1Q13231 466 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 NDUFAF6Q330K2 333 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 RBM20Q5T481 1227 aaKnown RBP11.4□□□□□ -0.58
PTCH1-203ENST00000375274 CDCA2Q69YH5 1023 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-203ENST00000375274 CAPN13Q6MZZ7 669 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-203ENST00000375274 IKBIPQ70UQ0 350 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 ERMP1Q7Z2K6 904 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 ADGRG6Q86SQ4 1221 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 SERPINA9Q86WD7 417 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 OR5K1Q8NHB7 308 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 TIFAQ96CG3 184 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 ZNF558Q96NG5 402 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 KLHL32Q96NJ5 620 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 TCF25Q9BQ70 676 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 OSBPL2Q9H1P3 480 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 ING3Q9NXR8 418 aa11.4□□□□□ -0.58
PTCH1-203ENST00000375274 H0Y858 1186 aa11.4□□□□□ -0.59
PTCH1-203ENST00000375274 AREL1O15033 823 aa11.4□□□□□ -0.59
PTCH1-203ENST00000375274 TP73O15350 636 aa11.4□□□□□ -0.59
PTCH1-203ENST00000375274 PGLSO95336 258 aa11.4□□□□□ -0.59
PTCH1-203ENST00000375274 SMPD1P17405 629 aa11.4□□□□□ -0.59
PTCH1-203ENST00000375274 PTPN5P54829 565 aa11.4□□□□□ -0.59
PTCH1-203ENST00000375274 TPTEP56180 551 aa11.4□□□□□ -0.59
PTCH1-203ENST00000375274 BNC1Q01954 994 aa11.4□□□□□ -0.59
PTCH1-203ENST00000375274 SLC10A7Q0GE19 358 aa11.4□□□□□ -0.59
PTCH1-203ENST00000375274 MTAPQ13126 283 aa11.4□□□□□ -0.59
PTCH1-203ENST00000375274 RAB43Q86YS6 212 aa11.4□□□□□ -0.59
PTCH1-203ENST00000375274 FEM1CQ96JP0 617 aa11.4□□□□□ -0.59
PTCH1-203ENST00000375274 COPS4Q9BT78 406 aa11.4□□□□□ -0.59
PTCH1-203ENST00000375274 TMEM106CQ9BVX2 250 aa11.4□□□□□ -0.59
PTCH1-203ENST00000375274 MFSD1Q9H3U5 465 aa11.4□□□□□ -0.59
PTCH1-203ENST00000375274 LIN28AQ9H9Z2 209 aaKnown RBP11.4□□□□□ -0.59
PTCH1-203ENST00000375274 HMX1Q9NP08 348 aaPredicted RBP11.4□□□□□ -0.59
PTCH1-203ENST00000375274 SEC14L3Q9UDX4 400 aa11.4□□□□□ -0.59
PTCH1-203ENST00000375274 SLC2A6Q9UGQ3 507 aa11.4□□□□□ -0.59
PTCH1-203ENST00000375274 ZNF221Q9UK13 617 aa11.4□□□□□ -0.59
PTCH1-203ENST00000375274 PTBP2Q9UKA9 531 aaKnown RBP11.4□□□□□ -0.59
PTCH1-203ENST00000375274 ARL5AQ9Y689 179 aa11.4□□□□□ -0.59
PTCH1-203ENST00000375274 NALCNQ8IZF0 1738 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 A0A088AWK7 358 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 FADS2P1A8MWK0 482 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 UGT2B4P06133 528 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 CDH1P12830 882 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 ZNF10P21506 573 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-203ENST00000375274 AZGP1P25311 298 aaKnown RBP11.39□□□□□ -0.59
PTCH1-203ENST00000375274 CDH4P55283 916 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 TUBA4AP68366 448 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 IL18R1Q13478 541 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 TAS1R3Q7RTX0 852 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 CGREF1Q99674 301 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 NFKBIZQ9BYH8 718 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 XYLT2Q9H1B5 865 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 SYNDIG1Q9H7V2 258 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 PEX16Q9Y5Y5 336 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 C10orf71Q711Q0 1435 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 TBX1O43435 398 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 IFNW1P05000 195 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 TNNI3P19429 210 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 IKBKEQ14164 716 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 TIGD5Q53EQ6 642 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 SLC24A5Q71RS6 500 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 ZDHHC14Q8IZN3 488 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 SMYD1Q8NB12 490 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 CDKN2AIPNLQ96HQ2 116 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 NPY6RQ99463 290 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 KIAA1522Q9P206 1035 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-203ENST00000375274 GALPQ9UBC7 116 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 CACNG4Q9UBN1 327 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 TESMINQ9Y4I5 508 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 MAGEB17A8MXT2 336 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 RSL1D1O76021 490 aaKnown RBP11.39□□□□□ -0.59
PTCH1-203ENST00000375274 RCVRNP35243 200 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 ZNF132P52740 706 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 PPP1R8Q12972 351 aaKnown RBP11.39□□□□□ -0.59
PTCH1-203ENST00000375274 ZNF513Q8N8E2 541 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-203ENST00000375274 VANGL1Q8TAA9 524 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-203ENST00000375274 PPP1R16AQ96I34 528 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 HIPK3Q9H422 1215 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 AMBNQ9NP70 447 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 INTS7Q9NVH2 962 aaKnown RBP11.39□□□□□ -0.59
PTCH1-203ENST00000375274 ING4Q9UNL4 249 aa11.39□□□□□ -0.59
PTCH1-203ENST00000375274 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-203ENST00000375274 PGRMC2O15173 223 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 CDK14O94921 469 aa11.38□□□□□ -0.59
PTCH1-203ENST00000375274 DNAJB1P25685 340 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms