RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 PPP2R3CQ969Q6 453 aa17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 RCN3Q96D15 328 aa17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 VPS35Q96QK1 796 aa17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 EFCAB1Q9HAE3 211 aa17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 PFDN4Q9NQP4 134 aa17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 CD84Q9UIB8 345 aa17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 MSRAQ9UJ68 235 aa17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 ADAMTS6Q9UKP5 1117 aa17.71■□□□□ 0.43
HLA-DQB1-201ENST00000374943 EPOPA6NHQ4 379 aa17.71■□□□□ 0.42
HLA-DQB1-201ENST00000374943 CFAP99D6REC4 459 aa17.71■□□□□ 0.42
HLA-DQB1-201ENST00000374943 AIM2O14862 343 aa17.71■□□□□ 0.42
HLA-DQB1-201ENST00000374943 GIPC1O14908 333 aa17.71■□□□□ 0.42
HLA-DQB1-201ENST00000374943 CHEK2O96017 543 aa17.71■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ALDOCP09972 364 aaKnown RBP17.71■□□□□ 0.42
HLA-DQB1-201ENST00000374943 PRR35P0CG20 571 aa17.71■□□□□ 0.42
HLA-DQB1-201ENST00000374943 VCLP18206 1134 aa17.71■□□□□ 0.42
HLA-DQB1-201ENST00000374943 GNAZP19086 355 aa17.71■□□□□ 0.42
HLA-DQB1-201ENST00000374943 CCR7P32248 378 aa17.71■□□□□ 0.42
HLA-DQB1-201ENST00000374943 MRPL19P49406 292 aaKnown RBP17.71■□□□□ 0.42
HLA-DQB1-201ENST00000374943 CCNG1P51959 295 aa17.71■□□□□ 0.42
HLA-DQB1-201ENST00000374943 MTTPP55157 894 aa17.71■□□□□ 0.42
HLA-DQB1-201ENST00000374943 FCHO2Q0JRZ9 810 aa17.71■□□□□ 0.42
HLA-DQB1-201ENST00000374943 FNDC3BQ53EP0 1204 aaKnown RBP17.71■□□□□ 0.42
HLA-DQB1-201ENST00000374943 WLSQ5T9L3 541 aa17.71■□□□□ 0.42
HLA-DQB1-201ENST00000374943 FAM219BQ5XKK7 198 aa17.71■□□□□ 0.42
HLA-DQB1-201ENST00000374943 OGFOD2Q6N063 350 aa17.71■□□□□ 0.42
HLA-DQB1-201ENST00000374943 Q6ZVL8 140 aa17.71■□□□□ 0.42
HLA-DQB1-201ENST00000374943 NRSN1Q8IZ57 195 aa17.71■□□□□ 0.42
HLA-DQB1-201ENST00000374943 DSELQ8IZU8 1212 aa17.71■□□□□ 0.42
HLA-DQB1-201ENST00000374943 PGAM4Q8N0Y7 254 aa17.71■□□□□ 0.42
HLA-DQB1-201ENST00000374943 FBXW8Q8N3Y1 598 aa17.71■□□□□ 0.42
HLA-DQB1-201ENST00000374943 DCUN1D1Q96GG9 259 aa17.71■□□□□ 0.42
HLA-DQB1-201ENST00000374943 POLG2Q9UHN1 485 aa17.71■□□□□ 0.42
HLA-DQB1-201ENST00000374943 SZT2Q5T011 3432 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ATP6AP2A0A1C7CYW4 349 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 H0Y858 1186 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 KPNA5O15131 536 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 TAPBPO15533 448 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 NUAK1O60285 661 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ATP6AP2O75787 350 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 MPC1LP0DKB6 136 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 LBPP18428 481 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ITGB7P26010 798 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 PRDX3P30048 256 aaKnown RBP17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ETV3P41162 512 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 STX1BP61266 288 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 STX5Q13190 355 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 E2F5Q15329 346 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 PHKG1Q16816 387 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 PLEKHS1Q5SXH7 462 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 C9orf64Q5T6V5 341 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 C1orf146Q5VVC0 180 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 VITQ6UXI7 678 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 LIPIQ6XZB0 460 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 GK5Q6ZS86 529 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 GOLGA7Q7Z5G4 137 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 DDIASQ8IXT1 998 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ZNF366Q8N895 744 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 TERB1Q8NA31 727 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 OR8D1Q8WZ84 308 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 SCAMP4Q969E2 229 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 MRPL38Q96DV4 380 aaKnown RBP17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 NSUN3Q9H649 340 aaKnown RBP17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 CDH7Q9ULB5 785 aa17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ZFC3H1O60293 1989 aaKnown RBP17.7■□□□□ 0.42
HLA-DQB1-201ENST00000374943 QSOX1O00391 747 aa17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 KRT36O76013 467 aa17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ENO2P09104 434 aaPredicted RBP17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 AKT1P31749 480 aa17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 CDKL1Q00532 357 aa17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 GTF2H2Q13888 395 aa17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ELAVL3Q14576 367 aaKnown RBP17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ZNF284Q2VY69 593 aa17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 TANGO2Q6ICL3 276 aa17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 GTF2H2CQ6P1K8 395 aa17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 TTC23LQ6PF05 361 aa17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 MYLK4Q86YV6 388 aaPredicted RBP17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 HOMEZQ8IX15 550 aa17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 CPA6Q8N4T0 437 aa17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 DLG3Q92796 817 aa17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ESAMQ96AP7 390 aa17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 RHBDF1Q96CC6 855 aa17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 SLC25A23Q9BV35 468 aa17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 RIOK2Q9BVS4 552 aaKnown RBP17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 TMEM245Q9H330 911 aa17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ZFP14Q9HCL3 533 aa17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 FBRSL1Q9HCM7 1045 aaKnown RBP17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 STX18Q9P2W9 335 aaKnown RBP17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 SUN2Q9UH99 717 aa17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 TSR3Q9UJK0 312 aaKnown RBP17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 PPM1HQ9ULR3 514 aa17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 PTGDR2Q9Y5Y4 395 aa17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 CKAP5Q14008 2032 aa17.69■□□□□ 0.42
HLA-DQB1-201ENST00000374943 MYO9BQ13459 2157 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 FADS2P1A8MWK0 482 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 OR7A17O14581 309 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 C8GP07360 202 aa17.68■□□□□ 0.42
HLA-DQB1-201ENST00000374943 ELFN1P0C7U0 828 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms