RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 MED21Q13503 144 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 LRP8Q14114 963 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 PTPRNQ16849 979 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 OR52E8Q6IFG1 317 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 FBXO39Q8N4B4 442 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 RPLP0P6Q8NHW5 317 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 TRPC4APQ8TEL6 797 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 SORCS1Q8WY21 1168 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 LMLNQ96KR4 655 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 C3orf30Q96M34 536 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 SMIM14Q96QK8 99 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 AKTIPQ9H8T0 292 aa15.34■□□□□ 0.05
CCDC40-202ENST00000374876 LRRC14BA6NHZ5 514 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 SYCE1LA8MT33 242 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 ANKRD66B4E2M5 251 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 PPP6CO00743 305 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 FBP2O00757 339 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 ACOT8O14734 319 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 EEF1DP29692 281 aaKnown RBP15.33■□□□□ 0.04
CCDC40-202ENST00000374876 MC4RP32245 332 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 TNFRSF4P43489 277 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 KIR2DL1P43626 348 aaPredicted RBP15.33■□□□□ 0.04
CCDC40-202ENST00000374876 RPS9P46781 194 aaKnown RBP15.33■□□□□ 0.04
CCDC40-202ENST00000374876 TTPAP49638 278 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 ACADVLP49748 655 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 KIF19Q2TAC6 998 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 FAM219BQ5XKK7 198 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 CXorf57Q6NSI4 855 aaKnown RBP15.33■□□□□ 0.04
CCDC40-202ENST00000374876 LINGO4Q6UY18 593 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 SPATA24Q86W54 205 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 APCDD1Q8J025 514 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 SNX31Q8N9S9 440 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 FAM156AQ8NDB6 213 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 TWIST2Q8WVJ9 160 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 ASB9Q96DX5 294 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 NSUN5Q96P11 429 aaKnown RBP15.33■□□□□ 0.04
CCDC40-202ENST00000374876 GPR21Q99679 349 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 CIPCQ9C0C6 399 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 SPATS2LQ9NUQ6 558 aaKnown RBP15.33■□□□□ 0.04
CCDC40-202ENST00000374876 PDP2Q9P2J9 529 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 INTS6Q9UL03 887 aaKnown RBP15.33■□□□□ 0.04
CCDC40-202ENST00000374876 FNDC3AQ9Y2H6 1198 aaKnown RBP15.33■□□□□ 0.04
CCDC40-202ENST00000374876 MED16Q9Y2X0 877 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 E7ENX8 843 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 MRASO14807 208 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 STX7O15400 261 aaKnown RBP15.33■□□□□ 0.04
CCDC40-202ENST00000374876 NRP2O60462 931 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 VPS26AO75436 327 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 TMCC1O94876 653 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 ZCCHC18P0CG32 403 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 PABPC1P11940 636 aaKnown RBP15.33■□□□□ 0.04
CCDC40-202ENST00000374876 VCLP18206 1134 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 PSMA3P25788 255 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 MZF1P28698 734 aaPredicted RBP15.33■□□□□ 0.04
CCDC40-202ENST00000374876 CDKN1CP49918 316 aaPredicted RBP15.33■□□□□ 0.04
CCDC40-202ENST00000374876 ARF5P84085 180 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 FBXO43Q4G163 708 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 SETMARQ53H47 684 aaPredicted RBP15.33■□□□□ 0.04
CCDC40-202ENST00000374876 KANK2Q63ZY3 851 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 NUDT18Q6ZVK8 323 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 ADIPOR2Q86V24 386 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 DDIASQ8IXT1 998 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 NKAPQ8N5F7 415 aaKnown RBP15.33■□□□□ 0.04
CCDC40-202ENST00000374876 OR9I1Q8NGQ6 314 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 ERLEC1Q96DZ1 483 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 ACOX2Q99424 681 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 CHRDQ9H2X0 955 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 SPAG4Q9NPE6 437 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 SUCOQ9UBS9 1254 aaKnown RBP15.33■□□□□ 0.04
CCDC40-202ENST00000374876 FKBPLQ9UIM3 349 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 SARDHQ9UL12 918 aa15.33■□□□□ 0.04
CCDC40-202ENST00000374876 OAS3Q9Y6K5 1087 aaKnown RBP15.33■□□□□ 0.04
CCDC40-202ENST00000374876 WDFY4Q6ZS81 3184 aa15.32■□□□□ 0.04
CCDC40-202ENST00000374876 PIP5K1BO14986 540 aa15.32■□□□□ 0.04
CCDC40-202ENST00000374876 RNASEH1O60930 286 aaKnown RBP15.32■□□□□ 0.04
CCDC40-202ENST00000374876 CRCPO75575 148 aa15.32■□□□□ 0.04
CCDC40-202ENST00000374876 PKMP14618 531 aaKnown RBP15.32■□□□□ 0.04
CCDC40-202ENST00000374876 CSKP41240 450 aa15.32■□□□□ 0.04
CCDC40-202ENST00000374876 WASP42768 502 aa15.32■□□□□ 0.04
CCDC40-202ENST00000374876 PSMD8P48556 350 aa15.32■□□□□ 0.04
CCDC40-202ENST00000374876 CLCQ05315 142 aa15.32■□□□□ 0.04
CCDC40-202ENST00000374876 LCP2Q13094 533 aa15.32■□□□□ 0.04
CCDC40-202ENST00000374876 TSNQ15631 228 aaKnown RBP15.32■□□□□ 0.04
CCDC40-202ENST00000374876 FUT11Q495W5 492 aa15.32■□□□□ 0.04
CCDC40-202ENST00000374876 ZRANB3Q5FWF4 1079 aa15.32■□□□□ 0.04
CCDC40-202ENST00000374876 EGFLAMQ63HQ2 1017 aa15.32■□□□□ 0.04
CCDC40-202ENST00000374876 PAOXQ6QHF9 649 aa15.32■□□□□ 0.04
CCDC40-202ENST00000374876 KIAA0907Q7Z7F0 614 aaPredicted RBP15.32■□□□□ 0.04
CCDC40-202ENST00000374876 TMEM126BQ8IUX1 230 aa15.32■□□□□ 0.04
CCDC40-202ENST00000374876 SYNPOQ8N3V7 929 aa15.32■□□□□ 0.04
CCDC40-202ENST00000374876 ZNF513Q8N8E2 541 aaPredicted RBP15.32■□□□□ 0.04
CCDC40-202ENST00000374876 BIRC8Q96P09 236 aa15.32■□□□□ 0.04
CCDC40-202ENST00000374876 BTBD9Q96Q07 612 aa15.32■□□□□ 0.04
CCDC40-202ENST00000374876 TUBGCP5Q96RT8 1024 aa15.32■□□□□ 0.04
CCDC40-202ENST00000374876 COPS7BQ9H9Q2 264 aaPredicted RBP15.32■□□□□ 0.04
CCDC40-202ENST00000374876 BPIFA1Q9NP55 256 aa15.32■□□□□ 0.04
CCDC40-202ENST00000374876 ELOVL2Q9NXB9 296 aa15.32■□□□□ 0.04
CCDC40-202ENST00000374876 KIAA1522Q9P206 1035 aaPredicted RBP15.32■□□□□ 0.04
CCDC40-202ENST00000374876 TRMT6Q9UJA5 497 aaKnown RBP15.32■□□□□ 0.04
CCDC40-202ENST00000374876 CAPN8A6NHC0 703 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms