RNA–Protein interactions for RNA: ENST00000374389.8

SRRM1-202, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SRRM1, Length 3,110 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-202ENST00000374389 NRG2O14511 850 aaPredicted RBP5.28□□□□□ -1.56
SRRM1-202ENST00000374389 OR7A17O14581 309 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 SMAD6O43541 496 aaKnown RBP5.28□□□□□ -1.56
SRRM1-202ENST00000374389 TBL1XO60907 577 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 CLIC3O95833 236 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 PYGLP06737 847 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 CAPN1P07384 714 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 CNPP09543 421 aaKnown RBP5.28□□□□□ -1.56
SRRM1-202ENST00000374389 UROSP10746 265 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 ZNF24P17028 368 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 HRH2P25021 359 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 MRPL19P49406 292 aaKnown RBP5.28□□□□□ -1.56
SRRM1-202ENST00000374389 IL2P60568 153 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 LIPEQ05469 1076 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 TWF1Q12792 350 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 ELAVL2Q12926 359 aaKnown RBP5.28□□□□□ -1.56
SRRM1-202ENST00000374389 MAP7D1Q3KQU3 841 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 COQ5Q5HYK3 327 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 HABP4Q5JVS0 413 aaKnown RBP5.28□□□□□ -1.56
SRRM1-202ENST00000374389 IRAK1BP1Q5VVH5 260 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 FAM151BQ6UXP7 276 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.28□□□□□ -1.569e-11■■■□□ 16.3
SRRM1-202ENST00000374389 TMCO2Q7Z6W1 182 aaPredicted RBP5.28□□□□□ -1.56
SRRM1-202ENST00000374389 CAMK1DQ8IU85 385 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 AQP12AQ8IXF9 295 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 CARNMT1Q8N4J0 409 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 FAM47BQ8NA70 645 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 TTC16Q8NEE8 873 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 C2orf15Q8WU43 125 aaKnown RBP5.28□□□□□ -1.56
SRRM1-202ENST00000374389 TFAP2CQ92754 450 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 VOPP1Q96AW1 172 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 DGCR14Q96DF8 476 aaKnown RBP5.28□□□□□ -1.56
SRRM1-202ENST00000374389 MYRFLQ96LU7 910 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 SH3GL3Q99963 347 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 OSBPL11Q9BXB4 747 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 ANKRD60Q9BZ19 345 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 PCDH12Q9NPG4 1184 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 TLR9Q9NR96 1032 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 ACTR3BQ9P1U1 418 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 CLEC4EQ9ULY5 219 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 OAZ3Q9UMX2 235 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 V9GYQ6 96 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 H3BNH8 94 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 H3BSA7 217 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 GFRA2O00451 464 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 ANKRD28O15084 1053 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 INPP4BO15327 924 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 SNX2O60749 519 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 EEDO75530 441 aaKnown RBP5.28□□□□□ -1.56
SRRM1-202ENST00000374389 SLC22A3O75751 556 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 MLYCDO95822 493 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 HSPA8P11142 646 aaKnown RBP5.28□□□□□ -1.56
SRRM1-202ENST00000374389 G6PDP11413 515 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 SLC5A2P31639 672 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 CSKP41240 450 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 CASP2P42575 452 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 PIK3CGP48736 1102 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 TTPAP49638 278 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 CCT8P50990 548 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 CCL23P55773 120 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 OR4D2P58180 307 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 SEMG2Q02383 582 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 PLOD1Q02809 727 aaPredicted RBP5.28□□□□□ -1.56
SRRM1-202ENST00000374389 BNIP2Q12982 314 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 TRAF3Q13114 568 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 PHKG1Q16816 387 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 FAAH2Q6GMR7 532 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 GOLGA7Q7Z5G4 137 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 SPATA19Q7Z5L4 167 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 ZSWIM9Q86XI8 627 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 APCDD1Q8J025 514 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 TMEM199Q8N511 208 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 CLDN19Q8N6F1 224 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 FNDC5Q8NAU1 212 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 OR56A4Q8NGH8 313 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 PIH1D2Q8WWB5 315 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 SEPT8Q92599 483 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 ISG20Q96AZ6 181 aaKnown RBP5.28□□□□□ -1.56
SRRM1-202ENST00000374389 ZNF382Q96SR6 550 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 CDK5RAP1Q96SZ6 601 aaKnown RBP5.28□□□□□ -1.56
SRRM1-202ENST00000374389 TMEM175Q9BSA9 504 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 FEM1AQ9BSK4 669 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 TSEN34Q9BSV6 310 aaKnown RBP5.28□□□□□ -1.56
SRRM1-202ENST00000374389 ALG2Q9H553 416 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 NSUN3Q9H649 340 aaKnown RBP5.28□□□□□ -1.56
SRRM1-202ENST00000374389 SOX17Q9H6I2 414 aaPredicted RBP5.28□□□□□ -1.56
SRRM1-202ENST00000374389 CAAP1Q9H8G2 361 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 TMEM165Q9HC07 324 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 ZNF334Q9HCZ1 680 aaPredicted RBP5.28□□□□□ -1.56
SRRM1-202ENST00000374389 TRPM5Q9NZQ8 1165 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 DNMT3BQ9UBC3 853 aaKnown RBP5.28□□□□□ -1.56
SRRM1-202ENST00000374389 AFF4Q9UHB7 1163 aaKnown RBP5.28□□□□□ -1.56
SRRM1-202ENST00000374389 EVLQ9UI08 416 aaPredicted RBP5.28□□□□□ -1.56
SRRM1-202ENST00000374389 CEPT1Q9Y6K0 416 aa5.28□□□□□ -1.56
SRRM1-202ENST00000374389 LAMA2P24043 3122 aaKnown RBP5.27□□□□□ -1.57
SRRM1-202ENST00000374389 CCDC154A6NI56 674 aa5.27□□□□□ -1.57
SRRM1-202ENST00000374389 TAPBPO15533 448 aa5.27□□□□□ -1.57
SRRM1-202ENST00000374389 SYNCRIPO60506 623 aaKnown RBP5.27□□□□□ -1.57
SRRM1-202ENST00000374389 VPS4BO75351 444 aa5.27□□□□□ -1.57
SRRM1-202ENST00000374389 KATNA1O75449 491 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms