RNA–Protein interactions for RNA: ENST00000373899.3

TFAM-202, Transcript of transcription factor A, mitochondrial, humanhuman

TSL 2

Gene TFAM, Length 1,121 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-202ENST00000373899 STYXQ8WUJ0 223 aa13.16□□□□□ -0.3
TFAM-202ENST00000373899 DNAJC1Q96KC8 554 aaKnown RBP13.16□□□□□ -0.3
TFAM-202ENST00000373899 ASB8Q9H765 288 aa13.16□□□□□ -0.3
TFAM-202ENST00000373899 PRDM8Q9NQV8 689 aa13.16□□□□□ -0.3
TFAM-202ENST00000373899 KLC4Q9NSK0 619 aa13.16□□□□□ -0.3
TFAM-202ENST00000373899 NLE1Q9NVX2 485 aaPredicted RBP13.16□□□□□ -0.3
TFAM-202ENST00000373899 GEMIN8Q9NWZ8 242 aaKnown RBP13.16□□□□□ -0.3
TFAM-202ENST00000373899 SMARCAL1Q9NZC9 954 aa13.16□□□□□ -0.3
TFAM-202ENST00000373899 AKAP7Q9P0M2 348 aaPredicted RBP13.16□□□□□ -0.3
TFAM-202ENST00000373899 SCHIP1Q9P0W5 487 aaPredicted RBP13.16□□□□□ -0.3
TFAM-202ENST00000373899 PISDQ9UG56 409 aa13.16□□□□□ -0.3
TFAM-202ENST00000373899 SNX12Q9UMY4 172 aa13.16□□□□□ -0.3
TFAM-202ENST00000373899 NEU2Q9Y3R4 380 aa13.16□□□□□ -0.3
TFAM-202ENST00000373899 DNMT3AQ9Y6K1 912 aaPredicted RBP13.16□□□□□ -0.3
TFAM-202ENST00000373899 RELNP78509 3460 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 TRBV5-4A0A0C4DH59 114 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 HGSO14964 777 aaPredicted RBP13.15□□□□□ -0.3
TFAM-202ENST00000373899 ZNF185O15231 689 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 KIF5CO60282 957 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 POP7O75817 140 aaKnown RBP13.15□□□□□ -0.3
TFAM-202ENST00000373899 APRTP07741 180 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 F3P13726 295 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 BRAFP15056 766 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 ITIH1P19827 911 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 CD1CP29017 333 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 HADHAP40939 763 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 ETV5P41161 510 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 GPR3P46089 330 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 OR1D5P58170 312 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 CDH17Q12864 832 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.15□□□□□ -0.3
TFAM-202ENST00000373899 TMEM220Q6QAJ8 160 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 ABRAXAS1Q6UWZ7 409 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 C4orf22Q6V702 233 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 WASH2PQ6VEQ5 465 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 ZNF574Q6ZN55 896 aaPredicted RBP13.15□□□□□ -0.3
TFAM-202ENST00000373899 LRRTM4Q86VH4 590 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 LURAP1LQ8IV03 231 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 GDAP1Q8TB36 358 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 SLC37A2Q8TED4 501 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 MAGOHBQ96A72 148 aaKnown RBP13.15□□□□□ -0.3
TFAM-202ENST00000373899 LRRC45Q96CN5 670 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 ZNF778Q96MU6 729 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 TIMM29Q9BSF4 260 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 AP1M1Q9BXS5 423 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 SLC25A18Q9H1K4 315 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 FAM96AQ9H5X1 160 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 WASH6PQ9NQA3 447 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 FOXJ2Q9P0K8 574 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 TUBD1Q9UJT1 453 aa13.15□□□□□ -0.3
TFAM-202ENST00000373899 LRRK2Q5S007 2527 aa13.14□□□□□ -0.31
TFAM-202ENST00000373899 IGLV3-16A0A075B6K0 115 aa13.14□□□□□ -0.31
TFAM-202ENST00000373899 PRAMEF33A0A0G2JMD5 474 aa13.14□□□□□ -0.31
TFAM-202ENST00000373899 TCRBV7S3A2A0A539 114 aa13.14□□□□□ -0.31
TFAM-202ENST00000373899 RHPN2P1A8MT19 583 aa13.14□□□□□ -0.31
TFAM-202ENST00000373899 CES2O00748 559 aa13.14□□□□□ -0.31
TFAM-202ENST00000373899 FANCGO15287 622 aa13.14□□□□□ -0.31
TFAM-202ENST00000373899 PRAMEF10O60809 474 aa13.14□□□□□ -0.31
TFAM-202ENST00000373899 CPNE6O95741 557 aa13.14□□□□□ -0.31
TFAM-202ENST00000373899 PRSS56P0CW18 603 aa13.14□□□□□ -0.31
TFAM-202ENST00000373899 XRCC1P18887 633 aaPredicted RBP13.14□□□□□ -0.31
TFAM-202ENST00000373899 ALDH4A1P30038 563 aa13.14□□□□□ -0.31
TFAM-202ENST00000373899 COILP38432 576 aaPredicted RBP13.14□□□□□ -0.31
TFAM-202ENST00000373899 SLC19A1P41440 591 aa13.14□□□□□ -0.31
TFAM-202ENST00000373899 ACVR1Q04771 509 aa13.14□□□□□ -0.31
TFAM-202ENST00000373899 DMPKQ09013 629 aa13.14□□□□□ -0.31
TFAM-202ENST00000373899 TRA2AQ13595 282 aaKnown RBP eCLIP13.14□□□□□ -0.31
TFAM-202ENST00000373899 TBR1Q16650 682 aa13.14□□□□□ -0.31
TFAM-202ENST00000373899 CCDC38Q502W7 563 aa13.14□□□□□ -0.31
TFAM-202ENST00000373899 SNX20Q7Z614 316 aa13.14□□□□□ -0.31
TFAM-202ENST00000373899 VASH2Q86V25 355 aa13.14□□□□□ -0.31
TFAM-202ENST00000373899 PIANPQ8IYJ0 282 aa13.14□□□□□ -0.31
TFAM-202ENST00000373899 OR13J1Q8NGT2 312 aa13.14□□□□□ -0.31
TFAM-202ENST00000373899 NAT14Q8WUY8 206 aa13.14□□□□□ -0.31
TFAM-202ENST00000373899 RANBP9Q96S59 729 aa13.14□□□□□ -0.31
TFAM-202ENST00000373899 SARS2Q9NP81 518 aaKnown RBP13.14□□□□□ -0.31
TFAM-202ENST00000373899 EIF2B3Q9NR50 452 aaKnown RBP13.14□□□□□ -0.31
TFAM-202ENST00000373899 ZNF624Q9P2J8 865 aaPredicted RBP13.14□□□□□ -0.31
TFAM-202ENST00000373899 RIMKLBQ9ULI2 386 aa13.14□□□□□ -0.31
TFAM-202ENST00000373899 WDR37Q9Y2I8 494 aa13.14□□□□□ -0.31
TFAM-202ENST00000373899 PCDHGA3Q9Y5H0 932 aa13.14□□□□□ -0.31
TFAM-202ENST00000373899 NBASA2RRP1 2371 aa13.13□□□□□ -0.31
TFAM-202ENST00000373899 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.13□□□□□ -0.31
TFAM-202ENST00000373899 IGHV1OR21-1A0A087WYE8 117 aa13.13□□□□□ -0.31
TFAM-202ENST00000373899 KIR2DS5A0A0G2JLQ3 304 aa13.13□□□□□ -0.31
TFAM-202ENST00000373899 A0A0G2JNG1 304 aa13.13□□□□□ -0.31
TFAM-202ENST00000373899 OR5K4A6NMS3 321 aa13.13□□□□□ -0.31
TFAM-202ENST00000373899 C9orf172C9J069 976 aa13.13□□□□□ -0.31
TFAM-202ENST00000373899 E7EVH7 732 aa13.13□□□□□ -0.31
TFAM-202ENST00000373899 STMND1H3BQB6 276 aa13.13□□□□□ -0.31
TFAM-202ENST00000373899 KIR2DS3K7RE56 304 aa13.13□□□□□ -0.31
TFAM-202ENST00000373899 SNX2O60749 519 aa13.13□□□□□ -0.31
TFAM-202ENST00000373899 KCNJ13O60928 360 aa13.13□□□□□ -0.31
TFAM-202ENST00000373899 ADRA1DP25100 572 aa13.13□□□□□ -0.31
TFAM-202ENST00000373899 MC4RP32245 332 aa13.13□□□□□ -0.31
TFAM-202ENST00000373899 MAGEA6P43360 314 aa13.13□□□□□ -0.31
TFAM-202ENST00000373899 UBE2IP63279 158 aaKnown RBP13.13□□□□□ -0.31
TFAM-202ENST00000373899 CYP4F2P78329 520 aa13.13□□□□□ -0.31
TFAM-202ENST00000373899 KIR2DS5Q14953 304 aa13.13□□□□□ -0.31
TFAM-202ENST00000373899 CLCA4Q14CN2 919 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms