RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 PCED1BQ96HM7 432 aa17.83■□□□□ 0.45
COL16A1-203ENST00000373672 KLHL32Q96NJ5 620 aa17.83■□□□□ 0.45
COL16A1-203ENST00000373672 GTF2IRD1Q9UHL9 959 aa17.83■□□□□ 0.45
COL16A1-203ENST00000373672 PIP5K1BO14986 540 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 POP4O95707 220 aaKnown RBP17.83■□□□□ 0.44
COL16A1-203ENST00000373672 ALDH4A1P30038 563 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 FLT3LGP49771 235 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 CHIT1Q13231 466 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 HTRA1Q92743 480 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 DIRAS2Q96HU8 199 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 CLCC1Q96S66 551 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 GPER1Q99527 375 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 PRRG4Q9BZD6 226 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 KCNN2Q9H2S1 579 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 HMGXB4Q9UGU5 601 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 FAM149AA5PLN7 773 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 OR4F21O95013 312 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 MATN4O95460 622 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 COL6A1P12109 1028 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 PTX3P26022 381 aaPredicted RBP17.83■□□□□ 0.44
COL16A1-203ENST00000373672 TAF1AQ15573 450 aaPredicted RBP17.83■□□□□ 0.44
COL16A1-203ENST00000373672 ESRP1Q6NXG1 681 aaKnown RBP17.83■□□□□ 0.44
COL16A1-203ENST00000373672 AHSA2Q719I0 299 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 GET4Q7L5D6 327 aaPredicted RBP17.83■□□□□ 0.44
COL16A1-203ENST00000373672 C11orf24Q96F05 449 aaPredicted RBP17.83■□□□□ 0.44
COL16A1-203ENST00000373672 ZNF221Q9UK13 617 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 NOCTQ9UK39 431 aaKnown RBP17.83■□□□□ 0.44
COL16A1-203ENST00000373672 CLEC4AQ9UMR7 237 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 CNTN6Q9UQ52 1028 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 ERVW-1Q9UQF0 538 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 OR2AG2A6NM03 316 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 MAGEB17A8MXT2 336 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 GPR25O00155 361 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 ESR1P03372 595 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 ARF5P84085 180 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 CFAP206Q8IYR0 622 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 SNX33Q8WV41 574 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 RFKQ969G6 155 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 ABCB9Q9NP78 766 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.83■□□□□ 0.44
COL16A1-203ENST00000373672 RIPK3Q9Y572 518 aa17.83■□□□□ 0.44
COL16A1-203ENST00000373672 RBM47A0AV96 593 aaKnown RBP17.82■□□□□ 0.44
COL16A1-203ENST00000373672 IQCF5A8MTL0 148 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 SLC22A2O15244 555 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 PTGER3P43115 390 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 CYP4F8P98187 520 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 OR52J3Q8NH60 311 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 TPK1Q9H3S4 243 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 OSER1Q9NX31 292 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 FBXW11Q9UKB1 542 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 ZNF879B4DU55 563 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 RGS20O76081 388 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 CHADLQ6NUI6 762 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 INTS10Q9NVR2 710 aaKnown RBP17.82■□□□□ 0.44
COL16A1-203ENST00000373672 RNASEH2AO75792 299 aaKnown RBP17.82■□□□□ 0.44
COL16A1-203ENST00000373672 PCDH1Q08174 1060 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 TYSND1Q2T9J0 566 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 RANBP3LQ86VV4 465 aaPredicted RBP17.82■□□□□ 0.44
COL16A1-203ENST00000373672 P2RY8Q86VZ1 359 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 ZNF433Q8N7K0 673 aaPredicted RBP17.82■□□□□ 0.44
COL16A1-203ENST00000373672 OR7D4Q8NG98 312 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 FAXDC2Q96IV6 333 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 FEM1CQ96JP0 617 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 DENND2DQ9H6A0 471 aaPredicted RBP17.82■□□□□ 0.44
COL16A1-203ENST00000373672 IGSF9Q9P2J2 1179 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 SNX7Q9UNH6 387 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 EPHX1P07099 455 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 CBX5P45973 191 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 MTTPP55157 894 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 LIN52Q52LA3 116 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 LCN1P1Q5VSP4 162 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 UTS2BQ765I0 119 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 SNX20Q7Z614 316 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 CRYBG2Q8N1P7 616 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 NAT14Q8WUY8 206 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 FETUBQ9UGM5 382 aa17.82■□□□□ 0.44
COL16A1-203ENST00000373672 EIF2B4Q9UI10 523 aaKnown RBP17.82■□□□□ 0.44
COL16A1-203ENST00000373672 FCF1Q9Y324 198 aaKnown RBP17.82■□□□□ 0.44
COL16A1-203ENST00000373672 CHRNB2P17787 502 aa17.81■□□□□ 0.44
COL16A1-203ENST00000373672 TEAD4Q15561 434 aa17.81■□□□□ 0.44
COL16A1-203ENST00000373672 TNFAIP8L3Q5GJ75 292 aa17.81■□□□□ 0.44
COL16A1-203ENST00000373672 EGFLAMQ63HQ2 1017 aa17.81■□□□□ 0.44
COL16A1-203ENST00000373672 MSANTD2Q6P1R3 559 aa17.81■□□□□ 0.44
COL16A1-203ENST00000373672 BRSK1Q8TDC3 778 aa17.81■□□□□ 0.44
COL16A1-203ENST00000373672 PHF12Q96QT6 1004 aa17.81■□□□□ 0.44
COL16A1-203ENST00000373672 TRPV5Q9NQA5 729 aa17.81■□□□□ 0.44
COL16A1-203ENST00000373672 CXCR6O00574 342 aa17.81■□□□□ 0.44
COL16A1-203ENST00000373672 SLC7A4O43246 635 aa17.81■□□□□ 0.44
COL16A1-203ENST00000373672 METTL18O95568 372 aa17.81■□□□□ 0.44
COL16A1-203ENST00000373672 FCHO2Q0JRZ9 810 aa17.81■□□□□ 0.44
COL16A1-203ENST00000373672 POMZP3Q6PJE2 187 aa17.81■□□□□ 0.44
COL16A1-203ENST00000373672 BANPQ8N9N5 519 aa17.81■□□□□ 0.44
COL16A1-203ENST00000373672 GATA5Q9BWX5 397 aaPredicted RBP17.81■□□□□ 0.44
COL16A1-203ENST00000373672 EBPLQ9BY08 206 aa17.81■□□□□ 0.44
COL16A1-203ENST00000373672 GSDMCQ9BYG8 508 aa17.81■□□□□ 0.44
COL16A1-203ENST00000373672 IL1RAPQ9NPH3 570 aa17.81■□□□□ 0.44
COL16A1-203ENST00000373672 NKIRAS2Q9NYR9 191 aa17.81■□□□□ 0.44
COL16A1-203ENST00000373672 A0A0X1KG70 313 aa17.81■□□□□ 0.44
COL16A1-203ENST00000373672 A0A1W2PQ72 361 aa17.81■□□□□ 0.44
COL16A1-203ENST00000373672 ARL5CA6NH57 179 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms