RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 CCDC40Q4G0X9 1142 aa11.9□□□□□ -0.5
HDAC8-204ENST00000373560 TDRD12Q587J7 1177 aaKnown RBP11.9□□□□□ -0.5
HDAC8-204ENST00000373560 C1orf189Q5VU69 101 aa11.9□□□□□ -0.5
HDAC8-204ENST00000373560 PRAMEF13Q5VWM6 474 aa11.9□□□□□ -0.5
HDAC8-204ENST00000373560 NPWQ8N729 165 aa11.9□□□□□ -0.5
HDAC8-204ENST00000373560 PIH1D2Q8WWB5 315 aa11.9□□□□□ -0.5
HDAC8-204ENST00000373560 SCRN2Q96FV2 425 aa11.9□□□□□ -0.5
HDAC8-204ENST00000373560 IP6K3Q96PC2 410 aa11.9□□□□□ -0.5
HDAC8-204ENST00000373560 KCTD15Q96SI1 283 aaPredicted RBP11.9□□□□□ -0.5
HDAC8-204ENST00000373560 TSG101Q99816 390 aa11.9□□□□□ -0.5
HDAC8-204ENST00000373560 CRACR2AQ9BSW2 395 aa11.9□□□□□ -0.5
HDAC8-204ENST00000373560 OR2AG1Q9H205 316 aa11.9□□□□□ -0.5
HDAC8-204ENST00000373560 NOD2Q9HC29 1040 aa11.9□□□□□ -0.5
HDAC8-204ENST00000373560 CBX8Q9HC52 389 aa11.9□□□□□ -0.5
HDAC8-204ENST00000373560 FAM207AQ9NSI2 230 aaPredicted RBP11.9□□□□□ -0.5
HDAC8-204ENST00000373560 SOHLH2Q9NX45 425 aa11.9□□□□□ -0.5
HDAC8-204ENST00000373560 PLA2G3Q9NZ20 509 aa11.9□□□□□ -0.5
HDAC8-204ENST00000373560 CDYLQ9Y232 598 aa11.9□□□□□ -0.5
HDAC8-204ENST00000373560 PLEKHA6Q9Y2H5 1048 aa11.9□□□□□ -0.5
HDAC8-204ENST00000373560 ANK3Q12955 4377 aaKnown RBP11.89□□□□□ -0.51
HDAC8-204ENST00000373560 CPAMD8Q8IZJ3 1885 aa11.89□□□□□ -0.51
HDAC8-204ENST00000373560 CUBNO60494 3623 aa11.89□□□□□ -0.51
HDAC8-204ENST00000373560 UBA6A0AVT1 1052 aaPredicted RBP11.89□□□□□ -0.51
HDAC8-204ENST00000373560 K7ELQ4 463 aaPredicted RBP11.89□□□□□ -0.51
HDAC8-204ENST00000373560 AGPSO00116 658 aa11.89□□□□□ -0.51
HDAC8-204ENST00000373560 KLHL41O60662 606 aa11.89□□□□□ -0.51
HDAC8-204ENST00000373560 SOCS5O75159 536 aa11.89□□□□□ -0.51
HDAC8-204ENST00000373560 PGLSO95336 258 aa11.89□□□□□ -0.51
HDAC8-204ENST00000373560 F10P00742 488 aa11.89□□□□□ -0.51
HDAC8-204ENST00000373560 ESRRAP11474 423 aaPredicted RBP11.89□□□□□ -0.51
HDAC8-204ENST00000373560 SLC9A1P19634 815 aa11.89□□□□□ -0.51
HDAC8-204ENST00000373560 CDH5P33151 784 aaPredicted RBP11.89□□□□□ -0.51
HDAC8-204ENST00000373560 KRT9P35527 623 aa11.89□□□□□ -0.51
HDAC8-204ENST00000373560 HADHAP40939 763 aa11.89□□□□□ -0.51
HDAC8-204ENST00000373560 WDR4P57081 412 aaKnown RBP11.89□□□□□ -0.51
HDAC8-204ENST00000373560 MAXP61244 160 aa11.89□□□□□ -0.51
HDAC8-204ENST00000373560 PLCL1Q15111 1095 aa11.89□□□□□ -0.51
HDAC8-204ENST00000373560 CYP2A13Q16696 494 aa11.89□□□□□ -0.51
HDAC8-204ENST00000373560 INSCQ1MX18 579 aa11.89□□□□□ -0.51
HDAC8-204ENST00000373560 AGAP7PQ5VUJ5 663 aa11.89□□□□□ -0.51
HDAC8-204ENST00000373560 TRIM72Q6ZMU5 477 aa11.89□□□□□ -0.51
HDAC8-204ENST00000373560 OR8K5Q8NH50 307 aa11.89□□□□□ -0.51
HDAC8-204ENST00000373560 COG1Q8WTW3 980 aa11.89□□□□□ -0.51
HDAC8-204ENST00000373560 FAM172AQ8WUF8 416 aa11.89□□□□□ -0.51
HDAC8-204ENST00000373560 CXorf40BQ96DE9 158 aa11.89□□□□□ -0.51
HDAC8-204ENST00000373560 AGAP4Q96P64 663 aa11.89□□□□□ -0.51
HDAC8-204ENST00000373560 EPS8L2Q9H6S3 715 aa11.89□□□□□ -0.51
HDAC8-204ENST00000373560 SAMSN1Q9NSI8 373 aaKnown RBP11.89□□□□□ -0.51
HDAC8-204ENST00000373560 ZNF358Q9NW07 568 aa11.89□□□□□ -0.51
HDAC8-204ENST00000373560 PADI2Q9Y2J8 665 aa11.89□□□□□ -0.51
HDAC8-204ENST00000373560 MEMO1Q9Y316 297 aa11.89□□□□□ -0.51
HDAC8-204ENST00000373560 INTS1Q8N201 2190 aaKnown RBP11.89□□□□□ -0.51
HDAC8-204ENST00000373560 MXRA5Q9NR99 2828 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 OR5K3A6NET4 321 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 ZNF749O43361 778 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 ZBTB11O95625 1053 aaPredicted RBP11.88□□□□□ -0.51
HDAC8-204ENST00000373560 HEXAP06865 529 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 CTSBP07858 339 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 CYP2A7P20853 494 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 SNX16P57768 344 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 FOLH1Q04609 750 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 NSUN2Q08J23 767 aaKnown RBP eCLIP11.88□□□□□ -0.51
HDAC8-204ENST00000373560 CETN1Q12798 172 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 IHHQ14623 411 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 HENMT1Q5T8I9 393 aaKnown RBP11.88□□□□□ -0.51
HDAC8-204ENST00000373560 TAF3Q5VWG9 929 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 TRIM65Q6PJ69 517 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 ABRAXAS1Q6UWZ7 409 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 C3P1Q6ZMU1 363 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 USP45Q70EL2 814 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 B4GALNT4Q76KP1 1039 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 ADGRG6Q86SQ4 1221 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 ZNF547Q8IVP9 402 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 TRIM59Q8IWR1 403 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 OR2Y1Q8NGV0 311 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 NINJ1Q92982 152 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 NTAN1Q96AB6 310 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 DHRS4Q9BTZ2 278 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 CARD9Q9H257 536 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 GOLPH3LQ9H4A5 285 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 RMI1Q9H9A7 625 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 SP110Q9HB58 689 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 GPATCH2LQ9NWQ4 482 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 ST6GALNAC2Q9UJ37 374 aa11.88□□□□□ -0.51
HDAC8-204ENST00000373560 CCDC66A2RUB6 948 aa11.87□□□□□ -0.51
HDAC8-204ENST00000373560 SLC9B1P1A6NJY1 282 aa11.87□□□□□ -0.51
HDAC8-204ENST00000373560 C2CD4BA6NLJ0 364 aa11.87□□□□□ -0.51
HDAC8-204ENST00000373560 SOCS6O14544 535 aa11.87□□□□□ -0.51
HDAC8-204ENST00000373560 MTX2O75431 263 aa11.87□□□□□ -0.51
HDAC8-204ENST00000373560 LY6G6DO95868 133 aa11.87□□□□□ -0.51
HDAC8-204ENST00000373560 INHBBP09529 407 aa11.87□□□□□ -0.51
HDAC8-204ENST00000373560 ZNF7P17097 686 aaPredicted RBP11.87□□□□□ -0.51
HDAC8-204ENST00000373560 ADSLP30566 484 aaPredicted RBP11.87□□□□□ -0.51
HDAC8-204ENST00000373560 LMAN1P49257 510 aa11.87□□□□□ -0.51
HDAC8-204ENST00000373560 MFAP5Q13361 173 aa11.87□□□□□ -0.51
HDAC8-204ENST00000373560 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.87□□□□□ -0.51
HDAC8-204ENST00000373560 KHDC1Q4VXA5 237 aaKnown RBP11.87□□□□□ -0.51
HDAC8-204ENST00000373560 ARMC12Q5T9G4 340 aa11.87□□□□□ -0.51
HDAC8-204ENST00000373560 NLRP8Q86W28 1048 aa11.87□□□□□ -0.51
HDAC8-204ENST00000373560 PHC2Q8IXK0 858 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms