RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 PABPC1LQ4VXU2 614 aaKnown RBP23.47■■□□□ 1.35
CDK9-201ENST00000373264 LRRC73Q5JTD7 316 aa23.47■■□□□ 1.35
CDK9-201ENST00000373264 PRMT9Q6P2P2 845 aa23.47■■□□□ 1.35
CDK9-201ENST00000373264 MRPS26Q9BYN8 205 aaKnown RBP23.47■■□□□ 1.35
CDK9-201ENST00000373264 CLPBQ9H078 707 aa23.47■■□□□ 1.35
CDK9-201ENST00000373264 IL21Q9HBE4 155 aa23.47■■□□□ 1.35
CDK9-201ENST00000373264 MAGEE1Q9HCI5 957 aa23.47■■□□□ 1.35
CDK9-201ENST00000373264 OLAHQ9NV23 265 aa23.47■■□□□ 1.35
CDK9-201ENST00000373264 OAZ3Q9UMX2 235 aa23.47■■□□□ 1.35
CDK9-201ENST00000373264 POLR3HQ9Y535 204 aaPredicted RBP23.47■■□□□ 1.35
CDK9-201ENST00000373264 CDH23Q9H251 3354 aa23.47■■□□□ 1.35
CDK9-201ENST00000373264 PFDN6O15212 129 aa23.47■■□□□ 1.35
CDK9-201ENST00000373264 BPIP17213 487 aa23.47■■□□□ 1.35
CDK9-201ENST00000373264 GGT5P36269 586 aa23.47■■□□□ 1.35
CDK9-201ENST00000373264 STK19P49842 368 aaPredicted RBP23.47■■□□□ 1.35
CDK9-201ENST00000373264 MTPNP58546 118 aa23.47■■□□□ 1.35
CDK9-201ENST00000373264 VEPH1Q14D04 833 aa23.47■■□□□ 1.35
CDK9-201ENST00000373264 HJURPQ8NCD3 748 aaPredicted RBP23.47■■□□□ 1.35
CDK9-201ENST00000373264 TRMT2BQ96GJ1 504 aaKnown RBP23.47■■□□□ 1.35
CDK9-201ENST00000373264 SEPHS2Q99611 448 aa23.47■■□□□ 1.35
CDK9-201ENST00000373264 OSBPL11Q9BXB4 747 aa23.47■■□□□ 1.35
CDK9-201ENST00000373264 SOX17Q9H6I2 414 aaPredicted RBP23.47■■□□□ 1.35
CDK9-201ENST00000373264 RPF2Q9H7B2 306 aaKnown RBP23.47■■□□□ 1.35
CDK9-201ENST00000373264 ZNF821O75541 412 aaPredicted RBP23.46■■□□□ 1.35
CDK9-201ENST00000373264 CD70P32970 193 aa23.46■■□□□ 1.35
CDK9-201ENST00000373264 ADARP55265 1226 aaKnown RBP23.46■■□□□ 1.35
CDK9-201ENST00000373264 TRAF3Q13114 568 aa23.46■■□□□ 1.35
CDK9-201ENST00000373264 NFATC2Q13469 925 aa23.46■■□□□ 1.35
CDK9-201ENST00000373264 NR6A1Q15406 480 aa23.46■■□□□ 1.35
CDK9-201ENST00000373264 CHRNA6Q15825 494 aa23.46■■□□□ 1.35
CDK9-201ENST00000373264 SLC44A4Q53GD3 710 aa23.46■■□□□ 1.35
CDK9-201ENST00000373264 PPP4R4Q6NUP7 873 aa23.46■■□□□ 1.35
CDK9-201ENST00000373264 BBS7Q8IWZ6 715 aa23.46■■□□□ 1.35
CDK9-201ENST00000373264 HS6ST3Q8IZP7 471 aa23.46■■□□□ 1.35
CDK9-201ENST00000373264 FAM47BQ8NA70 645 aa23.46■■□□□ 1.35
CDK9-201ENST00000373264 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.46■■□□□ 1.35
CDK9-201ENST00000373264 SMOXQ9NWM0 555 aa23.46■■□□□ 1.35
CDK9-201ENST00000373264 NUDT4Q9NZJ9 180 aa23.46■■□□□ 1.35
CDK9-201ENST00000373264 HACD3Q9P035 362 aa23.46■■□□□ 1.35
CDK9-201ENST00000373264 INSL5Q9Y5Q6 135 aa23.46■■□□□ 1.35
CDK9-201ENST00000373264 TCRBV5S2A0A599 114 aa23.45■■□□□ 1.35
CDK9-201ENST00000373264 AQP12BA6NM10 295 aa23.45■■□□□ 1.35
CDK9-201ENST00000373264 LSM1O15116 133 aaKnown RBP23.45■■□□□ 1.35
CDK9-201ENST00000373264 HRH2P25021 359 aa23.45■■□□□ 1.35
CDK9-201ENST00000373264 PSMA4P25789 261 aaKnown RBP23.45■■□□□ 1.35
CDK9-201ENST00000373264 DEFB115Q30KQ5 88 aa23.45■■□□□ 1.35
CDK9-201ENST00000373264 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.45■■□□□ 1.35
CDK9-201ENST00000373264 SGO1Q5FBB7 561 aa23.45■■□□□ 1.35
CDK9-201ENST00000373264 DGKKQ5KSL6 1271 aa23.45■■□□□ 1.35
CDK9-201ENST00000373264 Q6ZNB5 142 aa23.45■■□□□ 1.35
CDK9-201ENST00000373264 AQP12AQ8IXF9 295 aa23.45■■□□□ 1.35
CDK9-201ENST00000373264 TRIM54Q9BYV2 358 aa23.45■■□□□ 1.35
CDK9-201ENST00000373264 RBM38Q9H0Z9 239 aaKnown RBP23.45■■□□□ 1.35
CDK9-201ENST00000373264 MBD1Q9UIS9 605 aaPredicted RBP23.45■■□□□ 1.35
CDK9-201ENST00000373264 SMIM31A0A1B0GVY4 71 aa23.45■■□□□ 1.34
CDK9-201ENST00000373264 KRT87PA6NCN2 255 aa23.45■■□□□ 1.34
CDK9-201ENST00000373264 GFRA2O00451 464 aa23.45■■□□□ 1.34
CDK9-201ENST00000373264 CXCL10P02778 98 aa23.45■■□□□ 1.34
CDK9-201ENST00000373264 CD9P21926 228 aa23.45■■□□□ 1.34
CDK9-201ENST00000373264 CA8P35219 290 aa23.45■■□□□ 1.34
CDK9-201ENST00000373264 PTGR1Q14914 329 aa23.45■■□□□ 1.34
CDK9-201ENST00000373264 SLAIN1Q8ND83 568 aa23.45■■□□□ 1.34
CDK9-201ENST00000373264 ZFAND2BQ8WV99 257 aa23.45■■□□□ 1.34
CDK9-201ENST00000373264 C5orf42Q9H799 3197 aa23.45■■□□□ 1.34
CDK9-201ENST00000373264 H3BSA7 217 aa23.44■■□□□ 1.34
CDK9-201ENST00000373264 TRBC1P01850 177 aa23.44■■□□□ 1.34
CDK9-201ENST00000373264 HMGCS1Q01581 520 aa23.44■■□□□ 1.34
CDK9-201ENST00000373264 BNIP2Q12982 314 aa23.44■■□□□ 1.34
CDK9-201ENST00000373264 CDKN3Q16667 212 aa23.44■■□□□ 1.34
CDK9-201ENST00000373264 AP5B1Q2VPB7 878 aa23.44■■□□□ 1.34
CDK9-201ENST00000373264 PDCD4Q53EL6 469 aaKnown RBP23.44■■□□□ 1.34
CDK9-201ENST00000373264 GAREM2Q75VX8 874 aa23.44■■□□□ 1.34
CDK9-201ENST00000373264 DCAF4L2Q8NA75 395 aa23.44■■□□□ 1.34
CDK9-201ENST00000373264 VOPP1Q96AW1 172 aa23.44■■□□□ 1.34
CDK9-201ENST00000373264 TMEM169Q96HH4 297 aa23.44■■□□□ 1.34
CDK9-201ENST00000373264 LEF1Q9UJU2 399 aaPredicted RBP23.44■■□□□ 1.34
CDK9-201ENST00000373264 INTS6Q9UL03 887 aaKnown RBP23.44■■□□□ 1.34
CDK9-201ENST00000373264 BCL2L1Q07817 233 aa23.44■■□□□ 1.34
CDK9-201ENST00000373264 LMAN2Q12907 356 aa23.44■■□□□ 1.34
CDK9-201ENST00000373264 INPP5AQ14642 412 aa23.44■■□□□ 1.34
CDK9-201ENST00000373264 CYP20A1Q6UW02 462 aa23.44■■□□□ 1.34
CDK9-201ENST00000373264 ZFAND4Q86XD8 727 aa23.44■■□□□ 1.34
CDK9-201ENST00000373264 ZNF296Q8WUU4 475 aaPredicted RBP23.44■■□□□ 1.34
CDK9-201ENST00000373264 DGCR14Q96DF8 476 aaKnown RBP23.44■■□□□ 1.34
CDK9-201ENST00000373264 CEP295NLQ96MC4 621 aa23.44■■□□□ 1.34
CDK9-201ENST00000373264 EGFL8Q99944 293 aa23.44■■□□□ 1.34
CDK9-201ENST00000373264 RIC8BQ9NVN3 520 aa23.44■■□□□ 1.34
CDK9-201ENST00000373264 SUN2Q9UH99 717 aa23.44■■□□□ 1.34
CDK9-201ENST00000373264 NPIPB15A6NHN6 443 aaPredicted RBP23.43■■□□□ 1.34
CDK9-201ENST00000373264 PCBP2Q15366 365 aaKnown RBP eCLIP23.43■■□□□ 1.34
CDK9-201ENST00000373264 TPGS2Q68CL5 300 aa23.43■■□□□ 1.34
CDK9-201ENST00000373264 KRT80Q6KB66 452 aa23.43■■□□□ 1.34
CDK9-201ENST00000373264 DLEU7Q6UYE1 221 aa23.43■■□□□ 1.34
CDK9-201ENST00000373264 STK40Q8N2I9 435 aa23.43■■□□□ 1.34
CDK9-201ENST00000373264 TSPAN14Q8NG11 270 aa23.43■■□□□ 1.34
CDK9-201ENST00000373264 MYLIPQ8WY64 445 aa23.43■■□□□ 1.34
CDK9-201ENST00000373264 TFAP2CQ92754 450 aa23.43■■□□□ 1.34
CDK9-201ENST00000373264 FAM234BA2RU67 622 aa23.43■■□□□ 1.34
CDK9-201ENST00000373264 SEC24DO94855 1032 aaPredicted RBP23.43■■□□□ 1.34
CDK9-201ENST00000373264 IL10P22301 178 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms