RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 MEAF6Q9HAF1 191 aa17.24■□□□□ 0.35
SSBP3-203ENST00000371319 ZBTB26Q9HCK0 441 aa17.24■□□□□ 0.35
SSBP3-203ENST00000371319 C2CD4DB7Z1M9 353 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 H3BQ06 376 aaPredicted RBP17.23■□□□□ 0.35
SSBP3-203ENST00000371319 RAD51BO15315 384 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 MID1O15344 667 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 FFAR2O15552 330 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 NUAK1O60285 661 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 SKAP2O75563 359 aaPredicted RBP17.23■□□□□ 0.35
SSBP3-203ENST00000371319 ENO1P06733 434 aaKnown RBP17.23■□□□□ 0.35
SSBP3-203ENST00000371319 ENO3P13929 434 aaPredicted RBP17.23■□□□□ 0.35
SSBP3-203ENST00000371319 NCF2P19878 526 aaPredicted RBP17.23■□□□□ 0.35
SSBP3-203ENST00000371319 PTPN4P29074 926 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 CTHP32929 405 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 INHBCP55103 352 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 LCP2Q13094 533 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 PCBP2Q15366 365 aaKnown RBP eCLIP17.23■□□□□ 0.354e-9■■■■■ 71.4
SSBP3-203ENST00000371319 CST6Q15828 149 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 PHKG1Q16816 387 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 C18orf21Q32NC0 220 aaPredicted RBP17.23■□□□□ 0.35
SSBP3-203ENST00000371319 PLEKHS1Q5SXH7 462 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 CLEC6AQ6EIG7 209 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 RINLQ6ZS11 566 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 ZNF385DQ9H6B1 395 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 SLC40A1Q9NP59 571 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 MID1IP1Q9NPA3 183 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 SEMA4BQ9NPR2 832 aaPredicted RBP17.23■□□□□ 0.35
SSBP3-203ENST00000371319 EIF2B4Q9UI10 523 aaKnown RBP17.23■□□□□ 0.35
SSBP3-203ENST00000371319 TAGLN3Q9UI15 199 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 PTBP2Q9UKA9 531 aaKnown RBP17.23■□□□□ 0.35
SSBP3-203ENST00000371319 A0A1B0GTL3 188 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 H0YHG0 523 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 E2F3O00716 465 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 INPP4BO15327 924 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 LZTS3O60299 673 aaPredicted RBP17.23■□□□□ 0.35
SSBP3-203ENST00000371319 MPC1LP0DKB6 136 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 ESRRAP11474 423 aaPredicted RBP17.23■□□□□ 0.35
SSBP3-203ENST00000371319 CTSCP53634 463 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 DPTQ07507 201 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 E2F5Q15329 346 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 AGBL4Q5VU57 503 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 KANK2Q63ZY3 851 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 VRK3Q8IV63 474 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 CLYBLQ8N0X4 340 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 BEND7Q8N7W2 519 aaPredicted RBP17.23■□□□□ 0.35
SSBP3-203ENST00000371319 CXorf40AQ8TE69 158 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 PPM1EQ8WY54 764 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 ESAMQ96AP7 390 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 RDH14Q9HBH5 336 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 ANKRD12Q6UB98 2062 aa17.23■□□□□ 0.35
SSBP3-203ENST00000371319 TNRC18O15417 2968 aaPredicted RBP17.22■□□□□ 0.35
SSBP3-203ENST00000371319 OR2AG2A6NM03 316 aa17.22■□□□□ 0.35
SSBP3-203ENST00000371319 K7ESM1 405 aa17.22■□□□□ 0.35
SSBP3-203ENST00000371319 TAPBPO15533 448 aa17.22■□□□□ 0.35
SSBP3-203ENST00000371319 AP1G1O43747 822 aa17.22■□□□□ 0.35
SSBP3-203ENST00000371319 ADH1BP00325 375 aa17.22■□□□□ 0.35
SSBP3-203ENST00000371319 EGFP01133 1207 aa17.22■□□□□ 0.35
SSBP3-203ENST00000371319 FTH1P02794 183 aa17.22■□□□□ 0.35
SSBP3-203ENST00000371319 S100BP04271 92 aaPredicted RBP17.22■□□□□ 0.35
SSBP3-203ENST00000371319 KRT16P08779 473 aa17.22■□□□□ 0.35
SSBP3-203ENST00000371319 RASSF2P50749 326 aa17.22■□□□□ 0.35
SSBP3-203ENST00000371319 FOXA1P55317 472 aa17.22■□□□□ 0.35
SSBP3-203ENST00000371319 TAS2R38P59533 333 aa17.22■□□□□ 0.35
SSBP3-203ENST00000371319 RPS14P62263 151 aaKnown RBP17.22■□□□□ 0.35
SSBP3-203ENST00000371319 NLRP8Q86W28 1048 aa17.22■□□□□ 0.35
SSBP3-203ENST00000371319 PHYKPLQ8IUZ5 450 aa17.22■□□□□ 0.35
SSBP3-203ENST00000371319 CPSF7Q8N684 471 aaKnown RBP17.22■□□□□ 0.35
SSBP3-203ENST00000371319 ACTRT2Q8TDY3 377 aa17.22■□□□□ 0.35
SSBP3-203ENST00000371319 UTP4Q969X6 686 aaKnown RBP17.22■□□□□ 0.35
SSBP3-203ENST00000371319 GABRG3Q99928 467 aa17.22■□□□□ 0.35
SSBP3-203ENST00000371319 TRPV5Q9NQA5 729 aa17.22■□□□□ 0.35
SSBP3-203ENST00000371319 QSOX1O00391 747 aa17.21■□□□□ 0.35
SSBP3-203ENST00000371319 AZIN1O14977 448 aa17.21■□□□□ 0.35
SSBP3-203ENST00000371319 KPNA5O15131 536 aa17.21■□□□□ 0.35
SSBP3-203ENST00000371319 SYNCRIPO60506 623 aaKnown RBP17.21■□□□□ 0.35
SSBP3-203ENST00000371319 GPC4O75487 556 aa17.21■□□□□ 0.35
SSBP3-203ENST00000371319 RASSF9O75901 435 aa17.21■□□□□ 0.35
SSBP3-203ENST00000371319 C5AR1P21730 350 aa17.21■□□□□ 0.35
SSBP3-203ENST00000371319 CPA2P48052 419 aa17.21■□□□□ 0.35
SSBP3-203ENST00000371319 PRLHRP49683 370 aa17.21■□□□□ 0.35
SSBP3-203ENST00000371319 COPAP53621 1224 aa17.21■□□□□ 0.35
SSBP3-203ENST00000371319 HSPA14Q0VDF9 509 aa17.21■□□□□ 0.35
SSBP3-203ENST00000371319 TMEM115Q12893 351 aaPredicted RBP17.21■□□□□ 0.35
SSBP3-203ENST00000371319 BOP1Q14137 746 aaKnown RBP17.21■□□□□ 0.35
SSBP3-203ENST00000371319 NAA25Q14CX7 972 aa17.21■□□□□ 0.35
SSBP3-203ENST00000371319 PON2Q15165 354 aa17.21■□□□□ 0.35
SSBP3-203ENST00000371319 NXNQ6DKJ4 435 aa17.21■□□□□ 0.35
SSBP3-203ENST00000371319 KIAA1211LQ6NV74 962 aa17.21■□□□□ 0.35
SSBP3-203ENST00000371319 SYVN1Q86TM6 617 aa17.21■□□□□ 0.35
SSBP3-203ENST00000371319 OR56A4Q8NGH8 313 aa17.21■□□□□ 0.35
SSBP3-203ENST00000371319 UBTD2Q8WUN7 234 aa17.21■□□□□ 0.35
SSBP3-203ENST00000371319 ELMO1Q92556 727 aa17.21■□□□□ 0.35
SSBP3-203ENST00000371319 MIPEPQ99797 713 aa17.21■□□□□ 0.35
SSBP3-203ENST00000371319 TMEM79Q9BSE2 394 aa17.21■□□□□ 0.35
SSBP3-203ENST00000371319 HGH1Q9BTY7 390 aa17.21■□□□□ 0.35
SSBP3-203ENST00000371319 SERGEFQ9UGK8 458 aa17.21■□□□□ 0.35
SSBP3-203ENST00000371319 ZNF225Q9UK10 706 aa17.21■□□□□ 0.35
SSBP3-203ENST00000371319 DCXO43602 365 aa17.2■□□□□ 0.34
SSBP3-203ENST00000371319 RNASEH1O60930 286 aaKnown RBP17.2■□□□□ 0.34
SSBP3-203ENST00000371319 MLYCDO95822 493 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms