RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 SGSM3Q96HU1 749 aa20.12■□□□□ 0.81
SMNDC1-201ENST00000369592 PBKQ96KB5 322 aa20.12■□□□□ 0.81
SMNDC1-201ENST00000369592 ACSL5Q9ULC5 683 aa20.12■□□□□ 0.81
SMNDC1-201ENST00000369592 C17orf113A0A1B0GUU1 675 aa20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 CCDC162PA2VCL2 907 aa20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 B4E171 279 aa20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 PRB1P04280 392 aa20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 APRTP07741 180 aa20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 ADRA1DP25100 572 aa20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 TSPAN7P41732 249 aa20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 SEPT6Q14141 434 aa20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 GPR18Q14330 331 aa20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 DBN1Q16643 649 aa20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 CYP1B1Q16678 543 aa20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 TSTD2Q5T7W7 516 aa20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 CAPRIN2Q6IMN6 1127 aaKnown RBP20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 DTX1Q86Y01 620 aa20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 LILRA3Q8N6C8 439 aaPredicted RBP20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 AGBL5Q8NDL9 886 aa20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 GPR150Q8NGU9 434 aa20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 SNRNP27Q8WVK2 155 aaKnown RBP20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 NCSTNQ92542 709 aa20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 PEX13Q92968 403 aa20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 USP7Q93009 1102 aa20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 AHCYL2Q96HN2 611 aaKnown RBP20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 NAF1Q96HR8 494 aaKnown RBP20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 ZNF778Q96MU6 729 aa20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 RAB33BQ9H082 229 aa20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 FOXJ2Q9P0K8 574 aa20.11■□□□□ 0.81
SMNDC1-201ENST00000369592 MAST4O15021 2626 aa20.1■□□□□ 0.81
SMNDC1-201ENST00000369592 HEATR9A2RTY3 570 aa20.1■□□□□ 0.81
SMNDC1-201ENST00000369592 PRAMEF10O60809 474 aa20.1■□□□□ 0.81
SMNDC1-201ENST00000369592 ANKRD34CP0C6C1 535 aa20.1■□□□□ 0.81
SMNDC1-201ENST00000369592 RALBP11234 206 aa20.1■□□□□ 0.81
SMNDC1-201ENST00000369592 C19orf57Q0VDD7 668 aa20.1■□□□□ 0.81
SMNDC1-201ENST00000369592 ZRANB3Q5FWF4 1079 aa20.1■□□□□ 0.81
SMNDC1-201ENST00000369592 TTC27Q6P3X3 843 aa20.1■□□□□ 0.81
SMNDC1-201ENST00000369592 ZNF534Q76KX8 674 aa20.1■□□□□ 0.81
SMNDC1-201ENST00000369592 DNAAF3Q8N9W5 541 aa20.1■□□□□ 0.81
SMNDC1-201ENST00000369592 PMEPA1Q969W9 287 aa20.1■□□□□ 0.81
SMNDC1-201ENST00000369592 DCUN1D1Q96GG9 259 aa20.1■□□□□ 0.81
SMNDC1-201ENST00000369592 MS4A14Q96JA4 679 aa20.1■□□□□ 0.81
SMNDC1-201ENST00000369592 INSM2Q96T92 566 aaPredicted RBP20.1■□□□□ 0.81
SMNDC1-201ENST00000369592 OCIAD1Q9NX40 245 aa20.1■□□□□ 0.81
SMNDC1-201ENST00000369592 EPHA6Q9UF33 1036 aa20.1■□□□□ 0.81
SMNDC1-201ENST00000369592 SLC2A6Q9UGQ3 507 aa20.1■□□□□ 0.81
SMNDC1-201ENST00000369592 NEU2Q9Y3R4 380 aa20.1■□□□□ 0.81
SMNDC1-201ENST00000369592 TCAF1Q9Y4C2 921 aa20.1■□□□□ 0.81
SMNDC1-201ENST00000369592 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 OR51F1A6NGY5 319 aa20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 CFAP99D6REC4 459 aa20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 E7EVH7 732 aa20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 UBXN7O94888 489 aa20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 MTHFD1P11586 935 aaKnown RBP20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 MSNP26038 577 aaKnown RBP20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 HALP42357 657 aa20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 MAGEA6P43360 314 aa20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 GFERP55789 205 aa20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 LAMB3Q13751 1172 aa20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 ITIH4Q14624 930 aa20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 PACS1Q6VY07 963 aa20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 PPP1R21Q6ZMI0 780 aa20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 PLXDC1Q8IUK5 500 aa20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 TRIM48Q8IWZ4 208 aa20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 SLC35F6Q8N357 371 aa20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 HM13Q8TCT9 377 aa20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 ZFPM2Q8WW38 1151 aa20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 RSC1A1Q92681 617 aa20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 CXorf40BQ96DE9 158 aa20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 TAAR9Q96RI9 348 aa20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 SPRY4Q9C004 299 aa20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 WWP1Q9H0M0 922 aa20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 AKAP7Q9P0M2 348 aaPredicted RBP20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 SEMA5BQ9P283 1151 aa20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 PSMD13Q9UNM6 376 aa20.09■□□□□ 0.81
SMNDC1-201ENST00000369592 CCDC78A2IDD5 438 aa20.08■□□□□ 0.81
SMNDC1-201ENST00000369592 AGRPO00253 132 aa20.08■□□□□ 0.81
SMNDC1-201ENST00000369592 KLK10O43240 276 aa20.08■□□□□ 0.81
SMNDC1-201ENST00000369592 AP2A2O94973 939 aa20.08■□□□□ 0.81
SMNDC1-201ENST00000369592 TPSB2P20231 275 aa20.08■□□□□ 0.81
SMNDC1-201ENST00000369592 PBLDP30039 288 aaPredicted RBP20.08■□□□□ 0.81
SMNDC1-201ENST00000369592 CSTF2P33240 577 aaKnown RBP eCLIP20.08■□□□□ 0.81
SMNDC1-201ENST00000369592 CAPZBP47756 277 aa20.08■□□□□ 0.81
SMNDC1-201ENST00000369592 MAPK10P53779 464 aa20.08■□□□□ 0.81
SMNDC1-201ENST00000369592 TPSAB1Q15661 275 aa20.08■□□□□ 0.81
SMNDC1-201ENST00000369592 NLRP9Q7RTR0 991 aa20.08■□□□□ 0.81
SMNDC1-201ENST00000369592 CLDN19Q8N6F1 224 aa20.08■□□□□ 0.81
SMNDC1-201ENST00000369592 SPDYE1Q8NFV5 336 aaPredicted RBP20.08■□□□□ 0.81
SMNDC1-201ENST00000369592 COG1Q8WTW3 980 aa20.08■□□□□ 0.81
SMNDC1-201ENST00000369592 HDAC10Q969S8 669 aa20.08■□□□□ 0.81
SMNDC1-201ENST00000369592 C9orf72Q96LT7 481 aa20.08■□□□□ 0.81
SMNDC1-201ENST00000369592 RMDN2Q96LZ7 410 aa20.08■□□□□ 0.81
SMNDC1-201ENST00000369592 DDA1Q9BW61 102 aa20.08■□□□□ 0.81
SMNDC1-201ENST00000369592 OR52A5Q9H2C5 316 aa20.08■□□□□ 0.81
SMNDC1-201ENST00000369592 SIDT1Q9NXL6 827 aaKnown RBP20.08■□□□□ 0.81
SMNDC1-201ENST00000369592 PRSS21Q9Y6M0 314 aa20.08■□□□□ 0.81
SMNDC1-201ENST00000369592 TOX3O15405 576 aaPredicted RBP20.07■□□□□ 0.8
SMNDC1-201ENST00000369592 EFSO43281 561 aa20.07■□□□□ 0.8
SMNDC1-201ENST00000369592 ZSCAN12O43309 604 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms