RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 PRRT4C9JH25 899 aa10.52□□□□□ -0.72
TPM3-212ENST00000368533 TULP3O75386 442 aa10.52□□□□□ -0.72
TPM3-212ENST00000368533 NDUFS3O75489 264 aa10.52□□□□□ -0.72
TPM3-212ENST00000368533 PGLSO95336 258 aa10.52□□□□□ -0.72
TPM3-212ENST00000368533 HNRNPA1P09651 372 aaKnown RBP eCLIP10.52□□□□□ -0.72
TPM3-212ENST00000368533 SBK3P0C264 359 aa10.52□□□□□ -0.72
TPM3-212ENST00000368533 ADH5P11766 374 aa10.52□□□□□ -0.72
TPM3-212ENST00000368533 POLR2EP19388 210 aaKnown RBP10.52□□□□□ -0.72
TPM3-212ENST00000368533 DGKGP49619 791 aa10.52□□□□□ -0.72
TPM3-212ENST00000368533 PTPRNQ16849 979 aa10.52□□□□□ -0.72
TPM3-212ENST00000368533 FAM83EQ2M2I3 478 aa10.52□□□□□ -0.72
TPM3-212ENST00000368533 ARSIQ5FYB1 569 aa10.52□□□□□ -0.72
TPM3-212ENST00000368533 GK5Q6ZS86 529 aa10.52□□□□□ -0.72
TPM3-212ENST00000368533 TXNDC5Q8NBS9 432 aaKnown RBP10.52□□□□□ -0.72
TPM3-212ENST00000368533 RDH11Q8TC12 318 aa10.52□□□□□ -0.72
TPM3-212ENST00000368533 ACDQ96AP0 544 aa10.52□□□□□ -0.72
TPM3-212ENST00000368533 ESAMQ96AP7 390 aa10.52□□□□□ -0.72
TPM3-212ENST00000368533 COX4I2Q96KJ9 171 aa10.52□□□□□ -0.72
TPM3-212ENST00000368533 C1QTNF1Q9BXJ1 281 aa10.52□□□□□ -0.72
TPM3-212ENST00000368533 PLA2G2FQ9BZM2 168 aa10.52□□□□□ -0.72
TPM3-212ENST00000368533 VWA7Q9Y334 891 aa10.52□□□□□ -0.72
TPM3-212ENST00000368533 VPS13AQ96RL7 3174 aa10.52□□□□□ -0.73
TPM3-212ENST00000368533 ATP6AP2A0A1C7CYW4 349 aa10.52□□□□□ -0.73
TPM3-212ENST00000368533 LRRC14BA6NHZ5 514 aa10.52□□□□□ -0.73
TPM3-212ENST00000368533 ZNF197O14709 1029 aa10.52□□□□□ -0.73
TPM3-212ENST00000368533 ATP6AP2O75787 350 aa10.52□□□□□ -0.73
TPM3-212ENST00000368533 SRP72O76094 671 aaKnown RBP10.52□□□□□ -0.73
TPM3-212ENST00000368533 RHOBTB1O94844 696 aa10.52□□□□□ -0.73
TPM3-212ENST00000368533 ZBTB11O95625 1053 aaPredicted RBP10.52□□□□□ -0.73
TPM3-212ENST00000368533 LATS1O95835 1130 aa10.52□□□□□ -0.73
TPM3-212ENST00000368533 IGFBP4P22692 258 aa10.52□□□□□ -0.73
TPM3-212ENST00000368533 PRDX6P30041 224 aa10.52□□□□□ -0.73
TPM3-212ENST00000368533 KCNC1P48547 511 aa10.52□□□□□ -0.73
TPM3-212ENST00000368533 ALG1LQ6GMV1 187 aa10.52□□□□□ -0.73
TPM3-212ENST00000368533 DET1Q7L5Y6 550 aa10.52□□□□□ -0.73
TPM3-212ENST00000368533 PQLC1Q8N2U9 271 aa10.52□□□□□ -0.73
TPM3-212ENST00000368533 MARVELD2Q8N4S9 558 aa10.52□□□□□ -0.73
TPM3-212ENST00000368533 FATE1Q969F0 183 aa10.52□□□□□ -0.73
TPM3-212ENST00000368533 GPATCH1Q9BRR8 931 aaKnown RBP10.52□□□□□ -0.73
TPM3-212ENST00000368533 MFSD1Q9H3U5 465 aa10.52□□□□□ -0.73
TPM3-212ENST00000368533 PLGRKTQ9HBL7 147 aa10.52□□□□□ -0.73
TPM3-212ENST00000368533 TBCCD1Q9NVR7 557 aa10.52□□□□□ -0.73
TPM3-212ENST00000368533 CCDC167Q9P0B6 97 aa10.52□□□□□ -0.73
TPM3-212ENST00000368533 VTI1BQ9UEU0 232 aa10.52□□□□□ -0.73
TPM3-212ENST00000368533 PKP3Q9Y446 797 aa10.52□□□□□ -0.73
TPM3-212ENST00000368533 COPG1Q9Y678 874 aaKnown RBP10.52□□□□□ -0.73
TPM3-212ENST00000368533 DYTNA2CJ06 578 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 SLC7A4O43246 635 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 LEFTY1O75610 366 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 TNFAIP8O95379 198 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 IDO1P14902 403 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 KPNA2P52292 529 aaKnown RBP10.51□□□□□ -0.73
TPM3-212ENST00000368533 HYAL1Q12794 435 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 NUMA1Q14980 2115 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 CYP2A13Q16696 494 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 MRNIPQ6NTE8 343 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 BPIFB1Q8TDL5 484 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 PTCD2Q8WV60 388 aaKnown RBP10.51□□□□□ -0.73
TPM3-212ENST00000368533 ASB16Q96NS5 453 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 MCMBPQ9BTE3 642 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 OSBPL6Q9BZF3 934 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 ATP13A3Q9H7F0 1226 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 ZFYVE1Q9HBF4 777 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 CLDND1Q9NY35 253 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.51□□□□□ -0.73
TPM3-212ENST00000368533 TMED5Q9Y3A6 229 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 SLCO1B7G3V0H7 640 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 EIF3FO00303 357 aaPredicted RBP10.51□□□□□ -0.73
TPM3-212ENST00000368533 PRAMEF1O95521 474 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 FAM58BPP0C7Q3 252 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 CHRM3P20309 590 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 ME2P23368 584 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 BCAP31P51572 246 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 NME5P56597 212 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 SNRPD1P62314 119 aaKnown RBP10.51□□□□□ -0.73
TPM3-212ENST00000368533 CTBSQ01459 385 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 NSUN2Q08J23 767 aaKnown RBP eCLIP10.51□□□□□ -0.73
TPM3-212ENST00000368533 PDAP1Q13442 181 aaKnown RBP10.51□□□□□ -0.73
TPM3-212ENST00000368533 PTK2BQ14289 1009 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 TAF1AQ15573 450 aaPredicted RBP10.51□□□□□ -0.73
TPM3-212ENST00000368533 AGKQ53H12 422 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 ZNF648Q5T619 568 aaPredicted RBP10.51□□□□□ -0.73
TPM3-212ENST00000368533 LRRC66Q68CR7 880 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 SYCE2Q6PIF2 218 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 KBTBD6Q86V97 674 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 CLVS1Q8IUQ0 354 aaPredicted RBP10.51□□□□□ -0.73
TPM3-212ENST00000368533 CNTN4Q8IWV2 1026 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 LSMEM2Q8N112 164 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 CENPSQ8N2Z9 138 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 AFAP1L2Q8N4X5 818 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 CELF5Q8N6W0 485 aaKnown RBP10.51□□□□□ -0.73
TPM3-212ENST00000368533 SIDT2Q8NBJ9 832 aaKnown RBP10.51□□□□□ -0.73
TPM3-212ENST00000368533 MRPL57Q9BQC6 102 aaKnown RBP10.51□□□□□ -0.73
TPM3-212ENST00000368533 BCAP29Q9UHQ4 241 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 CDC14AQ9UNH5 594 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 FADS3Q9Y5Q0 445 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 ATG2AQ2TAZ0 1938 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 DOCK8Q8NF50 2099 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 TRPC5OSA6NMA1 111 aa10.51□□□□□ -0.73
TPM3-212ENST00000368533 KPNA3O00505 521 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms