RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 BBS12Q6ZW61 710 aa15.66■□□□□ 0.1
CKS1B-202ENST00000368436 SIDT2Q8NBJ9 832 aaKnown RBP15.66■□□□□ 0.1
CKS1B-202ENST00000368436 ZNF398Q8TD17 642 aa15.66■□□□□ 0.1
CKS1B-202ENST00000368436 CT55Q8WUE5 264 aa15.66■□□□□ 0.1
CKS1B-202ENST00000368436 HAUS1Q96CS2 278 aa15.66■□□□□ 0.1
CKS1B-202ENST00000368436 INSM2Q96T92 566 aaPredicted RBP15.66■□□□□ 0.1
CKS1B-202ENST00000368436 CD180Q99467 661 aa15.66■□□□□ 0.1
CKS1B-202ENST00000368436 RSPH14Q9UHP6 348 aa15.66■□□□□ 0.1
CKS1B-202ENST00000368436 RARRES3Q9UL19 164 aa15.66■□□□□ 0.1
CKS1B-202ENST00000368436 TP53TG5Q9Y2B4 290 aa15.66■□□□□ 0.1
CKS1B-202ENST00000368436 MAST4O15021 2626 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 CLEC18AA5D8T8 446 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 KLHL33A6NCF5 533 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 OR5K3A6NET4 321 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 MGAT4DA6NG13 374 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 C21orf140B9A014 251 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 AKR1B15C9JRZ8 316 aaPredicted RBP15.65■□□□□ 0.1
CKS1B-202ENST00000368436 MKRN2OSH3BPM6 223 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 K7EM74 188 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 STX7O15400 261 aaKnown RBP15.65■□□□□ 0.1
CKS1B-202ENST00000368436 LCA5LO95447 670 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 AGTP01019 485 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 MARCKSL1P49006 195 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 ACY1Q03154 408 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 KLRB1Q12918 225 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 TUBB3Q13509 450 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 KCNAB1Q14722 419 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 LONRF2Q1L5Z9 754 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 FNBP1LQ5T0N5 605 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 TCTN3Q6NUS6 607 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 CLEC18BQ6UXF7 455 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 TMEM135Q86UB9 458 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 D2HGDHQ8N465 521 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 BEND7Q8N7W2 519 aaPredicted RBP15.65■□□□□ 0.1
CKS1B-202ENST00000368436 CLEC18CQ8NCF0 446 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 MAP3K3Q99759 626 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 GORASP1Q9BQQ3 440 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 FSD1LQ9BXM9 530 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 WWP1Q9H0M0 922 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 ACSL5Q9ULC5 683 aa15.65■□□□□ 0.1
CKS1B-202ENST00000368436 DOPEY2Q9Y3R5 2298 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 CDC14CA4D256 554 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 TLCD2A6NGC4 264 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 AGAP14A8MT82 685 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 APOC4-APOC2K7ER74 178 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 SGTAO43765 313 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 ANXA9O76027 345 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 PRAMEF1O95521 474 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 APOC2P02655 101 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 EBLN1P0CF75 366 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 MSH3P20585 1137 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 LPOP22079 712 aaPredicted RBP15.64■□□□□ 0.09
CKS1B-202ENST00000368436 RBL1P28749 1068 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 PMS2P54278 862 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 GEMP55040 296 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 UBAP2LQ14157 1087 aaKnown RBP15.64■□□□□ 0.09
CKS1B-202ENST00000368436 PLCL1Q15111 1095 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 TAF1AQ15573 450 aaPredicted RBP15.64■□□□□ 0.09
CKS1B-202ENST00000368436 BCL7AQ4VC05 210 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 DNTTIP2Q5QJE6 756 aaKnown RBP15.64■□□□□ 0.09
CKS1B-202ENST00000368436 C11orf63Q6NUN7 778 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 RANBP10Q6VN20 620 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 CERS6Q6ZMG9 384 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 CCDC50Q8IVM0 306 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 APLFQ8IW19 511 aaPredicted RBP15.64■□□□□ 0.09
CKS1B-202ENST00000368436 OR2L2Q8NH16 312 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 RBM41Q96IZ5 413 aaKnown RBP15.64■□□□□ 0.09
CKS1B-202ENST00000368436 LINC00615Q96LM1 132 aaPredicted RBP15.64■□□□□ 0.09
CKS1B-202ENST00000368436 GPR87Q9BY21 358 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 TWSG1Q9GZX9 223 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 GBA3Q9H227 469 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 AKIRIN1Q9H9L7 192 aaPredicted RBP15.64■□□□□ 0.09
CKS1B-202ENST00000368436 FGF21Q9NSA1 209 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 IMP3Q9NV31 184 aaKnown RBP15.64■□□□□ 0.09
CKS1B-202ENST00000368436 HRASLS2Q9NWW9 162 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.64■□□□□ 0.09
CKS1B-202ENST00000368436 ARL5AQ9Y689 179 aa15.64■□□□□ 0.09
CKS1B-202ENST00000368436 PIPSLA2A3N6 862 aa15.63■□□□□ 0.09
CKS1B-202ENST00000368436 RFPL1O75677 317 aa15.63■□□□□ 0.09
CKS1B-202ENST00000368436 SRP72O76094 671 aaKnown RBP15.63■□□□□ 0.09
CKS1B-202ENST00000368436 NR1D1P20393 614 aa15.63■□□□□ 0.09
CKS1B-202ENST00000368436 PBLDP30039 288 aaPredicted RBP15.63■□□□□ 0.09
CKS1B-202ENST00000368436 AKT1P31749 480 aa15.63■□□□□ 0.09
CKS1B-202ENST00000368436 ADRA1AP35348 466 aa15.63■□□□□ 0.09
CKS1B-202ENST00000368436 HSD11B2P80365 405 aa15.63■□□□□ 0.09
CKS1B-202ENST00000368436 XIAPP98170 497 aa15.63■□□□□ 0.09
CKS1B-202ENST00000368436 MSLNQ13421 630 aaPredicted RBP15.63■□□□□ 0.09
CKS1B-202ENST00000368436 SEMA5AQ13591 1074 aa15.63■□□□□ 0.09
CKS1B-202ENST00000368436 LAMB3Q13751 1172 aa15.63■□□□□ 0.09
CKS1B-202ENST00000368436 SKOR2Q2VWA4 1001 aaPredicted RBP15.63■□□□□ 0.09
CKS1B-202ENST00000368436 DET1Q7L5Y6 550 aa15.63■□□□□ 0.09
CKS1B-202ENST00000368436 OOSP2Q86WS3 158 aa15.63■□□□□ 0.09
CKS1B-202ENST00000368436 CARFQ8N187 725 aa15.63■□□□□ 0.09
CKS1B-202ENST00000368436 OR4K2Q8NGD2 314 aa15.63■□□□□ 0.09
CKS1B-202ENST00000368436 SEC14L1Q92503 715 aa15.63■□□□□ 0.09
CKS1B-202ENST00000368436 KRT35Q92764 455 aa15.63■□□□□ 0.09
CKS1B-202ENST00000368436 ZNF501Q96CX3 271 aaPredicted RBP15.63■□□□□ 0.09
CKS1B-202ENST00000368436 FICDQ9BVA6 458 aa15.63■□□□□ 0.09
CKS1B-202ENST00000368436 HEMGNQ9BXL5 484 aa15.63■□□□□ 0.09
CKS1B-202ENST00000368436 ACTL8Q9H568 366 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms