RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 BPIP17213 487 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 PTPN2P17706 415 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 PEX2P28328 305 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 FOXA1P55317 472 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 RHDQ02161 417 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 ATP6AP1LQ52LC2 224 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 SULT1C3Q6IMI6 304 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 GPR153Q6NV75 609 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 PAOXQ6QHF9 649 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 BLOC1S3Q6QNY0 202 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 SBSNQ6UWP8 590 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 ARPINQ7Z6K5 226 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 SPATA24Q86W54 205 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 FUNDC1Q8IVP5 155 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 CMTM8Q8IZV2 173 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 EFCAB3Q8N7B9 438 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 OR6K2Q8NGY2 324 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 UBTD2Q8WUN7 234 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 GATA6Q92908 595 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 SLC46A2Q9BY10 475 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 SUV39H2Q9H5I1 410 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 RAD18Q9NS91 495 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 KCTD5Q9NXV2 234 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 ABCD2Q9UBJ2 740 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 EIF2B4Q9UI10 523 aaKnown RBP13.81□□□□□ -0.2
USF1-202ENST00000368020 GPR45Q9Y5Y3 372 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 H0YJX3 145 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 PPP6CO00743 305 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 RFPL2O75678 378 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 PRAMEF12O95522 483 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 CD1EP15812 388 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 ZNF30P17039 623 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 VCLP18206 1134 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 AGTR2P50052 363 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 HK3P52790 923 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 MS4A2Q01362 244 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 HYAL1Q12794 435 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 MAD2L1Q13257 205 aaPredicted RBP13.81□□□□□ -0.2
USF1-202ENST00000368020 RCAN2Q14206 197 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 GRIN2CQ14957 1233 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 GRAMD1BQ3KR37 738 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 CARD16Q5EG05 197 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 TCEAL5Q5H9L2 206 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 DGKKQ5KSL6 1271 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 ZNF697Q5TEC3 545 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 CAPRIN2Q6IMN6 1127 aaKnown RBP13.81□□□□□ -0.2
USF1-202ENST00000368020 TMEM154Q6P9G4 183 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 RNF111Q6ZNA4 994 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 GALNT13Q8IUC8 556 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 TTC16Q8NEE8 873 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 ZUFSPQ96AP4 578 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 MIEF2Q96C03 454 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 KCNA7Q96RP8 456 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 SLC2A11Q9BYW1 496 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 SFXN1Q9H9B4 322 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 FBRSL1Q9HCM7 1045 aaKnown RBP13.81□□□□□ -0.2
USF1-202ENST00000368020 ZDHHC3Q9NYG2 299 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 PLK2Q9NYY3 685 aa13.81□□□□□ -0.2
USF1-202ENST00000368020 INTS6Q9UL03 887 aaKnown RBP13.81□□□□□ -0.2
USF1-202ENST00000368020 A0A1W2PP18 115 aa13.8□□□□□ -0.2
USF1-202ENST00000368020 KPNA5O15131 536 aa13.8□□□□□ -0.2
USF1-202ENST00000368020 CCL16O15467 120 aa13.8□□□□□ -0.2
USF1-202ENST00000368020 SLC25A14O95258 325 aaPredicted RBP13.8□□□□□ -0.2
USF1-202ENST00000368020 CAPNS1P04632 268 aa13.8□□□□□ -0.2
USF1-202ENST00000368020 ENO2P09104 434 aaPredicted RBP13.8□□□□□ -0.2
USF1-202ENST00000368020 HSD17B1P14061 328 aa13.8□□□□□ -0.2
USF1-202ENST00000368020 TCF3P15923 654 aa13.8□□□□□ -0.2
USF1-202ENST00000368020 RECQLP46063 649 aaPredicted RBP13.8□□□□□ -0.2
USF1-202ENST00000368020 GTF2H2Q13888 395 aa13.8□□□□□ -0.2
USF1-202ENST00000368020 GRB7Q14451 532 aa13.8□□□□□ -0.2
USF1-202ENST00000368020 GPRC6AQ5T6X5 926 aa13.8□□□□□ -0.2
USF1-202ENST00000368020 GTF2H2CQ6P1K8 395 aa13.8□□□□□ -0.2
USF1-202ENST00000368020 BRAT1Q6PJG6 821 aa13.8□□□□□ -0.2
USF1-202ENST00000368020 KIAA1958Q8N8K9 716 aa13.8□□□□□ -0.2
USF1-202ENST00000368020 VN1R2Q8NFZ6 395 aa13.8□□□□□ -0.2
USF1-202ENST00000368020 OR9I1Q8NGQ6 314 aa13.8□□□□□ -0.2
USF1-202ENST00000368020 ZNF707Q96C28 371 aaPredicted RBP13.8□□□□□ -0.2
USF1-202ENST00000368020 GPATCH1Q9BRR8 931 aaKnown RBP13.8□□□□□ -0.2
USF1-202ENST00000368020 TNKS2Q9H2K2 1166 aa13.8□□□□□ -0.2
USF1-202ENST00000368020 RIMS3Q9UJD0 308 aa13.8□□□□□ -0.2
USF1-202ENST00000368020 PTBP2Q9UKA9 531 aaKnown RBP13.8□□□□□ -0.2
USF1-202ENST00000368020 RAB26Q9ULW5 256 aa13.8□□□□□ -0.2
USF1-202ENST00000368020 SLC8A2Q9UPR5 921 aa13.8□□□□□ -0.2
USF1-202ENST00000368020 BTRCQ9Y297 605 aa13.8□□□□□ -0.2
USF1-202ENST00000368020 PLXNB3Q9ULL4 1909 aa13.8□□□□□ -0.2
USF1-202ENST00000368020 NOTCH4Q99466 2003 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 TCRBV3S1A0A5B6 114 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 FAM234BA2RU67 622 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 WASH3PC4AMC7 463 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 SLC9A3R1O14745 358 aaPredicted RBP13.79□□□□□ -0.2
USF1-202ENST00000368020 EEDO75530 441 aaKnown RBP13.79□□□□□ -0.2
USF1-202ENST00000368020 SLC22A3O75751 556 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 WDR47O94967 919 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 OR56A5P0C7T3 313 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 CYP2A6P11509 494 aaPredicted RBP13.79□□□□□ -0.2
USF1-202ENST00000368020 PABPC1P11940 636 aaKnown RBP13.79□□□□□ -0.2
USF1-202ENST00000368020 HLA-FP30511 346 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 SLC7A1P30825 629 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 SLC7A2P52569 658 aa13.79□□□□□ -0.2
USF1-202ENST00000368020 ECT2LQ008S8 904 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms