RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 ZBTB20Q9HC78 741 aaPredicted RBP4.17□□□□□ -1.74
RNU4-28P-201ENST00000364739 EIF2B3Q9NR50 452 aaKnown RBP4.17□□□□□ -1.74
RNU4-28P-201ENST00000364739 MIOSQ9NXC5 875 aa4.17□□□□□ -1.74
RNU4-28P-201ENST00000364739 C2CD2Q9Y426 696 aa4.17□□□□□ -1.74
RNU4-28P-201ENST00000364739 PCDHGA5Q9Y5G8 931 aa4.17□□□□□ -1.74
RNU4-28P-201ENST00000364739 C15orf62A8K5M9 175 aa4.16□□□□□ -1.74
RNU4-28P-201ENST00000364739 HHLA1C9JL84 531 aa4.16□□□□□ -1.74
RNU4-28P-201ENST00000364739 SLC22A2O15244 555 aa4.16□□□□□ -1.74
RNU4-28P-201ENST00000364739 TMCC2O75069 709 aa4.16□□□□□ -1.74
RNU4-28P-201ENST00000364739 SERPINB2P05120 415 aa4.16□□□□□ -1.74
RNU4-28P-201ENST00000364739 RB1P06400 928 aa4.16□□□□□ -1.74
RNU4-28P-201ENST00000364739 ACP2P11117 423 aa4.16□□□□□ -1.74
RNU4-28P-201ENST00000364739 ACADMP11310 421 aa4.16□□□□□ -1.74
RNU4-28P-201ENST00000364739 PSMC4P43686 418 aa4.16□□□□□ -1.74
RNU4-28P-201ENST00000364739 SUOXP51687 545 aa4.16□□□□□ -1.74
RNU4-28P-201ENST00000364739 THOP1P52888 689 aa4.16□□□□□ -1.74
RNU4-28P-201ENST00000364739 CRYMQ14894 314 aa4.16□□□□□ -1.74
RNU4-28P-201ENST00000364739 DENND5BQ6ZUT9 1274 aa4.16□□□□□ -1.74
RNU4-28P-201ENST00000364739 NOTCH2NLQ7Z3S9 236 aa4.16□□□□□ -1.74
RNU4-28P-201ENST00000364739 KRTAP7-1Q8IUC3 87 aa4.16□□□□□ -1.74
RNU4-28P-201ENST00000364739 HACE1Q8IYU2 909 aa4.16□□□□□ -1.74
RNU4-28P-201ENST00000364739 TMTC2Q8N394 836 aa4.16□□□□□ -1.74
RNU4-28P-201ENST00000364739 WDSUB1Q8N9V3 476 aa4.16□□□□□ -1.74
RNU4-28P-201ENST00000364739 TBC1D16Q8TBP0 767 aa4.16□□□□□ -1.74
RNU4-28P-201ENST00000364739 SMPDL3BQ92485 455 aa4.16□□□□□ -1.74
RNU4-28P-201ENST00000364739 BARHL1Q9BZE3 327 aa4.16□□□□□ -1.74
RNU4-28P-201ENST00000364739 GFRA4Q9GZZ7 299 aa4.16□□□□□ -1.74
RNU4-28P-201ENST00000364739 DENND2DQ9H6A0 471 aaPredicted RBP4.16□□□□□ -1.74
RNU4-28P-201ENST00000364739 LYVE1Q9Y5Y7 322 aa4.16□□□□□ -1.74
RNU4-28P-201ENST00000364739 A0A1W2PR77 199 aa4.15□□□□□ -1.75
RNU4-28P-201ENST00000364739 A6NL46 340 aa4.15□□□□□ -1.75
RNU4-28P-201ENST00000364739 PTGES3LE9PB15 166 aa4.15□□□□□ -1.75
RNU4-28P-201ENST00000364739 PTP4A3O75365 173 aa4.15□□□□□ -1.75
RNU4-28P-201ENST00000364739 RSL1D1O76021 490 aaKnown RBP4.15□□□□□ -1.75
RNU4-28P-201ENST00000364739 GH2P01242 217 aa4.15□□□□□ -1.75
RNU4-28P-201ENST00000364739 ACTN1P12814 892 aa4.15□□□□□ -1.75
RNU4-28P-201ENST00000364739 PON1P27169 355 aa4.15□□□□□ -1.75
RNU4-28P-201ENST00000364739 TM4SF1P30408 202 aa4.15□□□□□ -1.75
RNU4-28P-201ENST00000364739 DRG2P55039 364 aaKnown RBP4.15□□□□□ -1.75
RNU4-28P-201ENST00000364739 PPIGQ13427 754 aaKnown RBP eCLIP4.15□□□□□ -1.75
RNU4-28P-201ENST00000364739 TMEM154Q6P9G4 183 aa4.15□□□□□ -1.75
RNU4-28P-201ENST00000364739 TICAM1Q8IUC6 712 aa4.15□□□□□ -1.75
RNU4-28P-201ENST00000364739 APLFQ8IW19 511 aaPredicted RBP4.15□□□□□ -1.75
RNU4-28P-201ENST00000364739 ZNF248Q8NDW4 579 aa4.15□□□□□ -1.75
RNU4-28P-201ENST00000364739 ZFAND2BQ8WV99 257 aa4.15□□□□□ -1.75
RNU4-28P-201ENST00000364739 WBP2Q969T9 261 aa4.15□□□□□ -1.75
RNU4-28P-201ENST00000364739 RHNO1Q9BSD3 238 aa4.15□□□□□ -1.75
RNU4-28P-201ENST00000364739 MOV10L1Q9BXT6 1211 aaKnown RBP4.15□□□□□ -1.75
RNU4-28P-201ENST00000364739 ADPRHL2Q9NX46 363 aa4.15□□□□□ -1.75
RNU4-28P-201ENST00000364739 OR6C76A6NM76 312 aa4.14□□□□□ -1.75
RNU4-28P-201ENST00000364739 MAGEB17A8MXT2 336 aa4.14□□□□□ -1.75
RNU4-28P-201ENST00000364739 CLIC2O15247 247 aa4.14□□□□□ -1.75
RNU4-28P-201ENST00000364739 SCGB1D1O95968 90 aa4.14□□□□□ -1.75
RNU4-28P-201ENST00000364739 IGHV4-38-2P0DP08 117 aa4.14□□□□□ -1.75
RNU4-28P-201ENST00000364739 GNB3P16520 340 aa4.14□□□□□ -1.75
RNU4-28P-201ENST00000364739 HOXC8P31273 242 aa4.14□□□□□ -1.75
RNU4-28P-201ENST00000364739 NR2C2P49116 596 aa4.14□□□□□ -1.75
RNU4-28P-201ENST00000364739 CDH11P55287 796 aa4.14□□□□□ -1.75
RNU4-28P-201ENST00000364739 ERVK11-1P61568 191 aa4.14□□□□□ -1.75
RNU4-28P-201ENST00000364739 IRF3Q14653 427 aa4.14□□□□□ -1.75
RNU4-28P-201ENST00000364739 AACSQ86V21 672 aa4.14□□□□□ -1.75
RNU4-28P-201ENST00000364739 OR2T12Q8NG77 320 aa4.14□□□□□ -1.75
RNU4-28P-201ENST00000364739 OLIG1Q8TAK6 271 aa4.14□□□□□ -1.75
RNU4-28P-201ENST00000364739 DAZLQ92904 295 aaKnown RBP4.14□□□□□ -1.75
RNU4-28P-201ENST00000364739 LRR1Q96L50 414 aa4.14□□□□□ -1.75
RNU4-28P-201ENST00000364739 INTS10Q9NVR2 710 aaKnown RBP4.14□□□□□ -1.75
RNU4-28P-201ENST00000364739 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.14□□□□□ -1.75
RNU4-28P-201ENST00000364739 SNED1Q8TER0 1413 aa4.13□□□□□ -1.75
RNU4-28P-201ENST00000364739 A0A0G2JLW4 131 aa4.13□□□□□ -1.75
RNU4-28P-201ENST00000364739 AP3D1O14617 1153 aa4.13□□□□□ -1.75
RNU4-28P-201ENST00000364739 DOK2O60496 412 aa4.13□□□□□ -1.75
RNU4-28P-201ENST00000364739 NGFP01138 241 aa4.13□□□□□ -1.75
RNU4-28P-201ENST00000364739 ZNF883P0CG24 379 aa4.13□□□□□ -1.75
RNU4-28P-201ENST00000364739 MMP9P14780 707 aa4.13□□□□□ -1.75
RNU4-28P-201ENST00000364739 KIAA1644Q3SXP7 199 aa4.13□□□□□ -1.75
RNU4-28P-201ENST00000364739 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
RNU4-28P-201ENST00000364739 KLC3Q6P597 504 aa4.13□□□□□ -1.75
RNU4-28P-201ENST00000364739 C1orf122Q6ZSJ8 110 aa4.13□□□□□ -1.75
RNU4-28P-201ENST00000364739 MFSD6Q6ZSS7 791 aa4.13□□□□□ -1.75
RNU4-28P-201ENST00000364739 SH2D5Q6ZV89 423 aa4.13□□□□□ -1.75
RNU4-28P-201ENST00000364739 ARID3BQ8IVW6 561 aaPredicted RBP4.13□□□□□ -1.75
RNU4-28P-201ENST00000364739 DNAJC22Q8N4W6 341 aa4.13□□□□□ -1.75
RNU4-28P-201ENST00000364739 ADAD2Q8NCV1 583 aaKnown RBP4.13□□□□□ -1.75
RNU4-28P-201ENST00000364739 TMEM190Q8WZ59 177 aa4.13□□□□□ -1.75
RNU4-28P-201ENST00000364739 FAM81BQ96LP2 452 aa4.13□□□□□ -1.75
RNU4-28P-201ENST00000364739 POLR3GLQ9BT43 218 aa4.13□□□□□ -1.75
RNU4-28P-201ENST00000364739 SMARCAD1Q9H4L7 1026 aa4.13□□□□□ -1.75
RNU4-28P-201ENST00000364739 SIX2Q9NPC8 291 aa4.13□□□□□ -1.75
RNU4-28P-201ENST00000364739 TAS2R14Q9NYV8 317 aa4.13□□□□□ -1.75
RNU4-28P-201ENST00000364739 NPAP1Q9NZP6 1156 aa4.13□□□□□ -1.75
RNU4-28P-201ENST00000364739 KCNJ14Q9UNX9 436 aa4.13□□□□□ -1.75
RNU4-28P-201ENST00000364739 PRSS51A0A1B0GVH4 220 aa4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 NR5A2O00482 541 aa4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 NDUFS4O43181 175 aa4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 GPR137BO60478 399 aa4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 ZNF821O75541 412 aaPredicted RBP4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 NKX2-1P43699 371 aaPredicted RBP4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 HSD17B4P51659 736 aa4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 KRTAP10-5P60370 271 aa4.12□□□□□ -1.75
RNU4-28P-201ENST00000364739 ARF3P61204 181 aaPredicted RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms